RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 UBE2MP61081 183 aaKnown RBP12.9□□□□□ -0.34
CTSA-202ENST00000354880 DHRS2Q13268 280 aa12.9□□□□□ -0.34
CTSA-202ENST00000354880 PPP1R1AQ13522 171 aa12.9□□□□□ -0.34
CTSA-202ENST00000354880 C17orf58Q2M2W7 97 aa12.9□□□□□ -0.34
CTSA-202ENST00000354880 LPCAT3Q6P1A2 487 aa12.9□□□□□ -0.34
CTSA-202ENST00000354880 OR8B3Q8NGG8 313 aa12.9□□□□□ -0.34
CTSA-202ENST00000354880 TMEM230Q96A57 120 aa12.9□□□□□ -0.34
CTSA-202ENST00000354880 NEIL1Q96FI4 390 aaPredicted RBP12.9□□□□□ -0.34
CTSA-202ENST00000354880 PSMG3-AS1Q96PY0 264 aa12.9□□□□□ -0.34
CTSA-202ENST00000354880 OR8B2Q96RD0 313 aa12.9□□□□□ -0.34
CTSA-202ENST00000354880 TOLLIPQ9H0E2 274 aa12.9□□□□□ -0.34
CTSA-202ENST00000354880 CLN8Q9UBY8 286 aa12.9□□□□□ -0.34
CTSA-202ENST00000354880 MALRD1Q5VYJ5 2156 aa12.9□□□□□ -0.34
CTSA-202ENST00000354880 NBPF19A0A087WUL8 3843 aa12.89□□□□□ -0.35
CTSA-202ENST00000354880 GPR37O15354 613 aa12.89□□□□□ -0.35
CTSA-202ENST00000354880 SSNA1O43805 119 aa12.89□□□□□ -0.35
CTSA-202ENST00000354880 HLA-AP01891 365 aaKnown RBP12.89□□□□□ -0.35
CTSA-202ENST00000354880 WNT2P09544 360 aa12.89□□□□□ -0.35
CTSA-202ENST00000354880 TRAPPC2P0DI81 140 aa12.89□□□□□ -0.35
CTSA-202ENST00000354880 TRAPPC2BP0DI82 140 aa12.89□□□□□ -0.35
CTSA-202ENST00000354880 OMGP23515 440 aa12.89□□□□□ -0.35
CTSA-202ENST00000354880 DHODHQ02127 395 aa12.89□□□□□ -0.35
CTSA-202ENST00000354880 GNMTQ14749 295 aa12.89□□□□□ -0.35
CTSA-202ENST00000354880 ABCA11PQ4W5N1 156 aa12.89□□□□□ -0.35
CTSA-202ENST00000354880 ZNF787Q6DD87 383 aa12.89□□□□□ -0.35
CTSA-202ENST00000354880 OR10V1Q8NGI7 309 aa12.89□□□□□ -0.35
CTSA-202ENST00000354880 ZNF431Q8TF32 576 aaPredicted RBP12.89□□□□□ -0.35
CTSA-202ENST00000354880 ZNF486Q96H40 463 aaPredicted RBP12.89□□□□□ -0.35
CTSA-202ENST00000354880 NEURL2Q9BR09 285 aa12.89□□□□□ -0.35
CTSA-202ENST00000354880 RSRP1Q9BUV0 290 aa12.89□□□□□ -0.35
CTSA-202ENST00000354880 MED28Q9H204 178 aa12.89□□□□□ -0.35
CTSA-202ENST00000354880 TAS2R3Q9NYW6 316 aa12.89□□□□□ -0.35
CTSA-202ENST00000354880 CSMD2Q7Z408 3487 aa12.89□□□□□ -0.35
CTSA-202ENST00000354880 IGHV3-43A0A0B4J1X8 118 aa12.88□□□□□ -0.35
CTSA-202ENST00000354880 IGHV3-43DP0DP04 118 aa12.88□□□□□ -0.35
CTSA-202ENST00000354880 GNRHRP30968 328 aa12.88□□□□□ -0.35
CTSA-202ENST00000354880 PPP1CCP36873 323 aaKnown RBP12.88□□□□□ -0.35
CTSA-202ENST00000354880 LUMP51884 338 aaPredicted RBP12.88□□□□□ -0.35
CTSA-202ENST00000354880 PIGPP57054 158 aa12.88□□□□□ -0.35
CTSA-202ENST00000354880 ZNF273Q14593 569 aa12.88□□□□□ -0.35
CTSA-202ENST00000354880 LTC4SQ16873 150 aa12.88□□□□□ -0.35
CTSA-202ENST00000354880 TMEM200BQ69YZ2 307 aa12.88□□□□□ -0.35
CTSA-202ENST00000354880 LYG2Q86SG7 212 aa12.88□□□□□ -0.35
CTSA-202ENST00000354880 LDLRAD3Q86YD5 345 aa12.88□□□□□ -0.35
CTSA-202ENST00000354880 NRGNQ92686 78 aa12.88□□□□□ -0.35
CTSA-202ENST00000354880 SLC5A7Q9GZV3 580 aa12.88□□□□□ -0.35
CTSA-202ENST00000354880 PARP12Q9H0J9 701 aaKnown RBP12.88□□□□□ -0.35
CTSA-202ENST00000354880 GAL3ST2Q9H3Q3 398 aa12.88□□□□□ -0.35
CTSA-202ENST00000354880 LINC00574Q9H8X3 128 aa12.88□□□□□ -0.35
CTSA-202ENST00000354880 PATZ1Q9HBE1 687 aaKnown RBP12.88□□□□□ -0.35
CTSA-202ENST00000354880 SLC2A9Q9NRM0 540 aa12.88□□□□□ -0.35
CTSA-202ENST00000354880 JPT1Q9UK76 154 aa12.88□□□□□ -0.35
CTSA-202ENST00000354880 RBM7Q9Y580 266 aaKnown RBP12.88□□□□□ -0.35
CTSA-202ENST00000354880 YLPM1P49750 1951 aaKnown RBP12.88□□□□□ -0.35
CTSA-202ENST00000354880 PTPN13Q12923 2485 aa12.88□□□□□ -0.35
CTSA-202ENST00000354880 GCN1Q92616 2671 aaKnown RBP12.88□□□□□ -0.35
CTSA-202ENST00000354880 TRBV23-1A0A0A0MS06 115 aa12.88□□□□□ -0.35
CTSA-202ENST00000354880 C9orf170A2RU37 121 aa12.88□□□□□ -0.35
CTSA-202ENST00000354880 VAMP1P23763 118 aa12.88□□□□□ -0.35
CTSA-202ENST00000354880 SSTR2P30874 369 aa12.88□□□□□ -0.35
CTSA-202ENST00000354880 PDLIM4P50479 330 aa12.88□□□□□ -0.35
CTSA-202ENST00000354880 LOXL3P58215 753 aa12.88□□□□□ -0.35
CTSA-202ENST00000354880 CD276Q5ZPR3 534 aa12.88□□□□□ -0.35
CTSA-202ENST00000354880 FAM53AQ6NSI3 398 aaPredicted RBP12.88□□□□□ -0.35
CTSA-202ENST00000354880 ZNF818PQ6ZRF7 136 aa12.88□□□□□ -0.35
CTSA-202ENST00000354880 FAM185AQ8N0U4 392 aa12.88□□□□□ -0.35
CTSA-202ENST00000354880 ZNF714Q96N38 554 aa12.88□□□□□ -0.35
CTSA-202ENST00000354880 NARFLQ9H6Q4 476 aa12.88□□□□□ -0.35
CTSA-202ENST00000354880 GNG12Q9UBI6 72 aa12.88□□□□□ -0.35
CTSA-202ENST00000354880 ATP5J2P56134 94 aa12.87□□□□□ -0.35
CTSA-202ENST00000354880 PHLDA2Q53GA4 152 aa12.87□□□□□ -0.35
CTSA-202ENST00000354880 WDR25Q64LD2 544 aaPredicted RBP12.87□□□□□ -0.35
CTSA-202ENST00000354880 AKAP14Q86UN6 197 aa12.87□□□□□ -0.35
CTSA-202ENST00000354880 BARX1Q9HBU1 254 aaPredicted RBP12.87□□□□□ -0.35
CTSA-202ENST00000354880 CCL28Q9NRJ3 127 aa12.87□□□□□ -0.35
CTSA-202ENST00000354880 IDI2-AS1Q9NZ38 188 aa12.87□□□□□ -0.35
CTSA-202ENST00000354880 CRYM-AS1A6NIL9 109 aa12.86□□□□□ -0.35
CTSA-202ENST00000354880 F5H0A9 414 aaPredicted RBP12.86□□□□□ -0.35
CTSA-202ENST00000354880 GPR31O00270 319 aa12.86□□□□□ -0.35
CTSA-202ENST00000354880 YPEL1O60688 119 aa12.86□□□□□ -0.35
CTSA-202ENST00000354880 OR8U9P0C7N5 309 aa12.86□□□□□ -0.35
CTSA-202ENST00000354880 SUPT4H1P63272 117 aaKnown RBP12.86□□□□□ -0.35
CTSA-202ENST00000354880 FCN2Q15485 313 aa12.86□□□□□ -0.35
CTSA-202ENST00000354880 TMEM30BQ3MIR4 351 aa12.86□□□□□ -0.35
CTSA-202ENST00000354880 MORN2Q502X0 79 aa12.86□□□□□ -0.35
CTSA-202ENST00000354880 SGPP2Q8IWX5 399 aa12.86□□□□□ -0.35
CTSA-202ENST00000354880 CCDC71LQ8N9Z2 235 aa12.86□□□□□ -0.35
CTSA-202ENST00000354880 OR8U1Q8NH10 309 aa12.86□□□□□ -0.35
CTSA-202ENST00000354880 RTN4IP1Q8WWV3 396 aaPredicted RBP12.86□□□□□ -0.35
CTSA-202ENST00000354880 YPEL2Q96QA6 119 aa12.86□□□□□ -0.35
CTSA-202ENST00000354880 BPESC1Q9GZL8 116 aa12.86□□□□□ -0.35
CTSA-202ENST00000354880 TEX13DA0A0J9YY54 714 aaPredicted RBP12.85□□□□□ -0.35
CTSA-202ENST00000354880 HSD17B6O14756 317 aa12.85□□□□□ -0.35
CTSA-202ENST00000354880 CCNKO75909 580 aa12.85□□□□□ -0.35
CTSA-202ENST00000354880 RGS11O94810 467 aa12.85□□□□□ -0.35
CTSA-202ENST00000354880 SFT2D2O95562 160 aa12.85□□□□□ -0.35
CTSA-202ENST00000354880 DUS4LO95620 317 aaKnown RBP12.85□□□□□ -0.35
CTSA-202ENST00000354880 CCL3L1P16619 93 aa12.85□□□□□ -0.35
CTSA-202ENST00000354880 CMTM1Q8IZ96 169 aa12.85□□□□□ -0.35
CTSA-202ENST00000354880 C12orf45Q8N5I9 185 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms