RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 TRAPPC6AO75865 159 aa9.35□□□□□ -0.91
SND1-201ENST00000354725 FUT3P21217 361 aa9.35□□□□□ -0.91
SND1-201ENST00000354725 RPS16P62249 146 aaKnown RBP9.35□□□□□ -0.91
SND1-201ENST00000354725 EBPQ15125 230 aaKnown RBP9.35□□□□□ -0.91
SND1-201ENST00000354725 NNATQ16517 81 aa9.35□□□□□ -0.91
SND1-201ENST00000354725 DEFB110Q30KQ9 67 aa9.35□□□□□ -0.91
SND1-201ENST00000354725 TMEM205Q6UW68 189 aa9.35□□□□□ -0.91
SND1-201ENST00000354725 C9orf40Q8IXQ3 194 aa9.35□□□□□ -0.91
SND1-201ENST00000354725 OR10G3Q8NGC4 313 aa9.35□□□□□ -0.91
SND1-201ENST00000354725 OR13C9Q8NGT0 318 aa9.35□□□□□ -0.91
SND1-201ENST00000354725 GPR119Q8TDV5 335 aa9.35□□□□□ -0.91
SND1-201ENST00000354725 OR11A1Q9GZK7 315 aa9.35□□□□□ -0.91
SND1-201ENST00000354725 CELSR3Q9NYQ7 3312 aa9.35□□□□□ -0.91
SND1-201ENST00000354725 RNF212BA8MTL3 300 aa9.35□□□□□ -0.91
SND1-201ENST00000354725 CCKBRP32239 447 aa9.35□□□□□ -0.91
SND1-201ENST00000354725 SLC35A1P78382 337 aa9.35□□□□□ -0.91
SND1-201ENST00000354725 PMPCAQ10713 525 aa9.35□□□□□ -0.91
SND1-201ENST00000354725 GUSBP11Q6P575 273 aa9.35□□□□□ -0.91
SND1-201ENST00000354725 TOMM20LQ6UXN7 152 aa9.35□□□□□ -0.91
SND1-201ENST00000354725 TMEM182Q6ZP80 229 aaPredicted RBP9.35□□□□□ -0.91
SND1-201ENST00000354725 NXF5Q9H1B4 397 aaKnown RBP9.35□□□□□ -0.91
SND1-201ENST00000354725 LYRM2Q9NU23 88 aaPredicted RBP9.35□□□□□ -0.91
SND1-201ENST00000354725 KLHL13Q9P2N7 655 aa9.35□□□□□ -0.91
SND1-201ENST00000354725 R4GMQ9 66 aa9.35□□□□□ -0.91
SND1-201ENST00000354725 DMXL2Q8TDJ6 3036 aa9.34□□□□□ -0.91
SND1-201ENST00000354725 FREM3P0C091 2139 aa9.34□□□□□ -0.91
SND1-201ENST00000354725 TRBV24-1A0A075B6N3 115 aa9.34□□□□□ -0.91
SND1-201ENST00000354725 PPIAL4EA0A075B759 164 aa9.34□□□□□ -0.91
SND1-201ENST00000354725 PPIAL4CA0A0B4J2A2 164 aa9.34□□□□□ -0.91
SND1-201ENST00000354725 PPIAL4DF5H284 164 aa9.34□□□□□ -0.91
SND1-201ENST00000354725 CDIPTO14735 213 aa9.34□□□□□ -0.91
SND1-201ENST00000354725 XRCC2O43543 280 aa9.34□□□□□ -0.91
SND1-201ENST00000354725 PPIAL4FP0DN26 164 aa9.34□□□□□ -0.91
SND1-201ENST00000354725 CTLA4P16410 223 aa9.34□□□□□ -0.91
SND1-201ENST00000354725 RND2P52198 227 aa9.34□□□□□ -0.91
SND1-201ENST00000354725 SLC18B1Q6NT16 456 aa9.34□□□□□ -0.91
SND1-201ENST00000354725 OR52N5Q8NH56 324 aa9.34□□□□□ -0.91
SND1-201ENST00000354725 TAS2R4Q9NYW5 299 aa9.34□□□□□ -0.91
SND1-201ENST00000354725 MEMO1Q9Y316 297 aa9.34□□□□□ -0.91
SND1-201ENST00000354725 A0A1B0GU03 582 aa9.34□□□□□ -0.91
SND1-201ENST00000354725 A0A1W2PQM1 296 aa9.34□□□□□ -0.91
SND1-201ENST00000354725 LILRA5A6NI73 299 aa9.34□□□□□ -0.91
SND1-201ENST00000354725 H0YL77 283 aa9.34□□□□□ -0.91
SND1-201ENST00000354725 HSD17B6O14756 317 aa9.34□□□□□ -0.91
SND1-201ENST00000354725 CTSDP07339 412 aaPredicted RBP9.34□□□□□ -0.91
SND1-201ENST00000354725 AKR1C4P17516 323 aa9.34□□□□□ -0.91
SND1-201ENST00000354725 ATP5IP56385 69 aaPredicted RBP9.34□□□□□ -0.91
SND1-201ENST00000354725 ZP4Q12836 540 aa9.34□□□□□ -0.91
SND1-201ENST00000354725 UNC119Q13432 240 aa9.34□□□□□ -0.91
SND1-201ENST00000354725 C1QL3Q5VWW1 255 aa9.34□□□□□ -0.91
SND1-201ENST00000354725 RNF138Q8WVD3 245 aa9.34□□□□□ -0.91
SND1-201ENST00000354725 APH1AQ96BI3 265 aa9.34□□□□□ -0.91
SND1-201ENST00000354725 AQP10Q96PS8 301 aa9.34□□□□□ -0.91
SND1-201ENST00000354725 ABHD6Q9BV23 337 aa9.34□□□□□ -0.91
SND1-201ENST00000354725 SIRPDQ9H106 197 aa9.34□□□□□ -0.91
SND1-201ENST00000354725 ZZEF1O43149 2961 aa9.34□□□□□ -0.91
SND1-201ENST00000354725 ETV2O00321 342 aaPredicted RBP9.33□□□□□ -0.92
SND1-201ENST00000354725 PLPP3O14495 311 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 SYNGR4O95473 234 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 PAX2Q02962 417 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 ACKR1Q16570 336 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 CEACAM21Q3KPI0 293 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 OR51A2Q8NGJ7 313 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 KCNG3Q8TAE7 436 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 SSC4DQ8WTU2 575 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 TVP23CQ96ET8 276 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 MS4A10Q96PG2 267 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 VAMP8Q9BV40 100 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 SRD5A3Q9H8P0 318 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 A0A1W2PNU3 283 aaPredicted RBP9.33□□□□□ -0.92
SND1-201ENST00000354725 ACTL6BO94805 426 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 HHEXQ03014 270 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 GLYATL3Q5SZD4 288 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 OR4A47Q6IF82 309 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 CALHM1Q8IU99 346 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 OR8I2Q8N0Y5 310 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 OR52L2PQ8NGH6 319 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 SMDT1Q9H4I9 107 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 hCG_38984A0A1B0GV85 526 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 A0A1B0GW64 132 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 MEGF11A6BM72 1044 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 MEIS3P1A6NDR6 274 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 OR5B21A6NL26 309 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 TAAR5O14804 337 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 DNPH1O43598 174 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 OR7C2O60412 319 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 CTSEP14091 401 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 ZFP36L1Q07352 338 aaKnown RBP9.33□□□□□ -0.92
SND1-201ENST00000354725 PRSS54Q6PEW0 395 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 NIT1Q86X76 327 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 CISD2Q8N5K1 135 aaKnown RBP9.33□□□□□ -0.92
SND1-201ENST00000354725 SLC45A2Q9UMX9 530 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 DHDHQ9UQ10 334 aa9.33□□□□□ -0.92
SND1-201ENST00000354725 GJE1A6NN92 205 aa9.32□□□□□ -0.92
SND1-201ENST00000354725 YPEL1O60688 119 aa9.32□□□□□ -0.92
SND1-201ENST00000354725 KLK2P20151 261 aa9.32□□□□□ -0.92
SND1-201ENST00000354725 RPL32P62910 135 aaKnown RBP9.32□□□□□ -0.92
SND1-201ENST00000354725 FOXF1Q12946 379 aa9.32□□□□□ -0.92
SND1-201ENST00000354725 TRIP6Q15654 476 aaKnown RBP9.32□□□□□ -0.92
SND1-201ENST00000354725 ZNF429Q86V71 674 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms