RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 MSMO1Q15800 293 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 SLC25A47Q6Q0C1 308 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 TDHQ8IZJ6 230 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 SIGLECL1Q8N7X8 197 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 OR1L6Q8NGR2 347 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 VWCEQ96DN2 955 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 NEIL1Q96FI4 390 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-201ENST00000352993 TMEM56Q96MV1 263 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 ZNF552Q9H707 407 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-201ENST00000352993 TMEM56-RWDD3S4R434 201 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 IGKV1D-13A0A0B4J2D9 117 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 PGPEP1LA6NFU8 196 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 ZNF814B7Z6K7 855 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 IGKV1-13P0DP09 117 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 DEFA4P12838 97 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 KITLGP21583 273 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 MPLP40238 635 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 HINT1P49773 126 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-201ENST00000352993 ARF1P84077 181 aaKnown RBP6.55□□□□□ -1.36
BRCA1-201ENST00000352993 ZNF90Q03938 601 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 ARL16Q0P5N6 197 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 C9orf50Q5SZB4 431 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 CRIP3Q6Q6R5 217 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 Q6ZWC4 215 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 OR4C5Q8NGB2 326 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 OR1N1Q8NGS0 311 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 SSC4DQ8WTU2 575 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 WDYHV1Q96HA8 205 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 C11orf1Q9H5F2 150 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 GPR35Q9HC97 309 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 KCNS2Q9ULS6 477 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 IGKV1-27A0A075B6S5 117 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 LOC102724200A0A096LPH7 203 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-201ENST00000352993 A0A0G2JRQ6 117 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 SERF1AO75920 110 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 PSG2P11465 335 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 CBLN1P23435 193 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 SERF2P84101 59 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 SHBQ15464 509 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 UNC80Q8N2C7 3258 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 OR10G9Q8NGN4 311 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 OR10G7Q8NGN6 311 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 SPSB1Q96BD6 273 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 ASXL3Q9C0F0 2248 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 TAAR3PQ9P1P4 343 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 DIRC3C9JPN6 131 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 C11orf94C9JXX5 98 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 TRAF3IP2O43734 574 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-201ENST00000352993 SPINK4O60575 86 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 PATE4P0C8F1 98 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 SPINK2P20155 84 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 PMCHP20382 165 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 SLC38A11Q08AI6 406 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 SPATA45Q537H7 98 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 NMSQ5H8A3 153 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 ERASQ7Z444 233 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 RPP25LQ8N5L8 163 aaKnown RBP6.54□□□□□ -1.36
BRCA1-201ENST00000352993 ZNF525Q8N782 197 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 FAM131CQ96AQ9 280 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 RASL10BQ96S79 203 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 C20orf144Q9BQM9 153 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 SDK2Q58EX2 2172 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 CABIN1Q9Y6J0 2220 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 TRBV11-1A0A0K0K1C0 115 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 CLEC18AA5D8T8 446 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 NPIPA2E9PIF3 369 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 NPIPA3F8WFD2 350 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 THBS3P49746 956 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 FFAR4Q5NUL3 377 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 ZDHHC23Q8IYP9 409 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 CLEC18CQ8NCF0 446 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 UBALD1Q8TB05 177 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 APH1AQ96BI3 265 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 STARD4Q96DR4 205 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 ABHD14BQ96IU4 210 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 OXGR1Q96P68 337 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 TMEM204Q9BSN7 226 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 ZNF586Q9NXT0 402 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 PPP1R3CQ9UQK1 317 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 WIPI2Q9Y4P8 454 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 IGKV1-12A0A0C4DH73 117 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 A0A0U1RQV5 110 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 SLC22A20A6NK97 555 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 TMEM250H0YL14 139 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 CCL25O15444 150 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 EFNA2O43921 213 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 IGKV1D-12P01611 117 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 C1QTNF9P0C862 333 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 CEACAM8P31997 349 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-201ENST00000352993 NPBWR2P48146 333 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 VAMP3Q15836 100 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 ATOH7Q8N100 152 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 STPG4Q8N801 248 aa6.54□□□□□ -1.36
BRCA1-201ENST00000352993 TAF15Q92804 592 aaKnown RBP eCLIP6.54□□□□□ -1.366e-6■□□□□ 11.2
BRCA1-201ENST00000352993 KIAA1324LA8MWY0 1029 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-201ENST00000352993 F6UZH7 168 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 NDUFB4O95168 129 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 CCNOP22674 350 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 UCP1P25874 307 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 PAFAH1B2P68402 229 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms