RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 SYNGR2O43760 224 aa20.83■□□□□ 0.92
CPNE1-202ENST00000352393 SPINK2P20155 84 aa20.83■□□□□ 0.92
CPNE1-202ENST00000352393 ARL16Q0P5N6 197 aa20.83■□□□□ 0.92
CPNE1-202ENST00000352393 ESPL1Q14674 2120 aa20.83■□□□□ 0.92
CPNE1-202ENST00000352393 ZNF787Q6DD87 383 aa20.83■□□□□ 0.92
CPNE1-202ENST00000352393 C6orf15Q6UXA7 325 aaPredicted RBP20.83■□□□□ 0.92
CPNE1-202ENST00000352393 HAPLN4Q86UW8 402 aa20.83■□□□□ 0.92
CPNE1-202ENST00000352393 PKIBQ9C010 78 aa20.83■□□□□ 0.92
CPNE1-202ENST00000352393 VSIRQ9H7M9 311 aa20.83■□□□□ 0.92
CPNE1-202ENST00000352393 ZNF665Q9H7R5 613 aa20.83■□□□□ 0.92
CPNE1-202ENST00000352393 DMRT1Q9Y5R6 373 aa20.83■□□□□ 0.92
CPNE1-202ENST00000352393 NEURL1O76050 574 aa20.82■□□□□ 0.92
CPNE1-202ENST00000352393 SYNGR4O95473 234 aa20.82■□□□□ 0.92
CPNE1-202ENST00000352393 IGKV1-5P01602 117 aa20.82■□□□□ 0.92
CPNE1-202ENST00000352393 RAB11AP62491 216 aa20.82■□□□□ 0.92
CPNE1-202ENST00000352393 ACSF3Q4G176 576 aaPredicted RBP20.82■□□□□ 0.92
CPNE1-202ENST00000352393 PYY3Q5JQD4 70 aa20.82■□□□□ 0.92
CPNE1-202ENST00000352393 SCGB1C1Q8TD33 95 aa20.82■□□□□ 0.92
CPNE1-202ENST00000352393 RNF150Q9ULK6 438 aa20.82■□□□□ 0.92
CPNE1-202ENST00000352393 ARGFXA6NJG6 315 aa20.81■□□□□ 0.92
CPNE1-202ENST00000352393 CYB5BO43169 146 aa20.81■□□□□ 0.92
CPNE1-202ENST00000352393 WNT5AP41221 380 aa20.81■□□□□ 0.92
CPNE1-202ENST00000352393 PNRC1Q12796 327 aaPredicted RBP20.81■□□□□ 0.92
CPNE1-202ENST00000352393 TESK1Q15569 626 aa20.81■□□□□ 0.92
CPNE1-202ENST00000352393 SPNS3Q6ZMD2 512 aa20.81■□□□□ 0.92
CPNE1-202ENST00000352393 SSX7Q7RTT5 188 aa20.81■□□□□ 0.92
CPNE1-202ENST00000352393 APH1AQ96BI3 265 aa20.81■□□□□ 0.92
CPNE1-202ENST00000352393 TRIOBPQ9H2D6 2365 aa20.81■□□□□ 0.92
CPNE1-202ENST00000352393 IAPPP10997 89 aa20.81■□□□□ 0.92
CPNE1-202ENST00000352393 RND2P52198 227 aa20.81■□□□□ 0.92
CPNE1-202ENST00000352393 Q6P435 159 aa20.81■□□□□ 0.92
CPNE1-202ENST00000352393 IL1F10Q8WWZ1 152 aa20.81■□□□□ 0.92
CPNE1-202ENST00000352393 THOC3Q96J01 351 aaKnown RBP20.81■□□□□ 0.92
CPNE1-202ENST00000352393 GAR1Q9NY12 217 aaKnown RBP20.81■□□□□ 0.92
CPNE1-202ENST00000352393 B4GALT7Q9UBV7 327 aa20.81■□□□□ 0.92
CPNE1-202ENST00000352393 ARHGAP21Q5T5U3 1957 aa20.8■□□□□ 0.92
CPNE1-202ENST00000352393 ZFP92A6NM28 416 aa20.8■□□□□ 0.92
CPNE1-202ENST00000352393 METTL15P1P0C7V9 234 aa20.8■□□□□ 0.92
CPNE1-202ENST00000352393 S100A2P29034 98 aa20.8■□□□□ 0.92
CPNE1-202ENST00000352393 CA5BP1Q8WTZ4 195 aa20.8■□□□□ 0.92
CPNE1-202ENST00000352393 OR51I2Q9H344 312 aa20.8■□□□□ 0.92
CPNE1-202ENST00000352393 TMEM242Q9NWH2 141 aa20.8■□□□□ 0.92
CPNE1-202ENST00000352393 PSENENQ9NZ42 101 aa20.8■□□□□ 0.92
CPNE1-202ENST00000352393 RHBDL1O75783 438 aa20.8■□□□□ 0.92
CPNE1-202ENST00000352393 PLP2Q04941 152 aa20.8■□□□□ 0.92
CPNE1-202ENST00000352393 MOB1BQ7L9L4 216 aa20.8■□□□□ 0.92
CPNE1-202ENST00000352393 UBALD2Q8IYN6 164 aa20.8■□□□□ 0.92
CPNE1-202ENST00000352393 RCC1LQ96I51 464 aaKnown RBP20.8■□□□□ 0.92
CPNE1-202ENST00000352393 HES7Q9BYE0 225 aa20.8■□□□□ 0.92
CPNE1-202ENST00000352393 OR14J1Q9UGF5 321 aa20.8■□□□□ 0.92
CPNE1-202ENST00000352393 LOXL2Q9Y4K0 774 aa20.8■□□□□ 0.92
CPNE1-202ENST00000352393 SEC14L6B5MCN3 397 aa20.79■□□□□ 0.92
CPNE1-202ENST00000352393 TRGC2P03986 189 aa20.79■□□□□ 0.92
CPNE1-202ENST00000352393 LRRC75BQ2VPJ9 315 aa20.79■□□□□ 0.92
CPNE1-202ENST00000352393 LCN15Q6UWW0 184 aa20.79■□□□□ 0.92
CPNE1-202ENST00000352393 BCL2L14Q9BZR8 327 aa20.79■□□□□ 0.92
CPNE1-202ENST00000352393 TRBV23-1A0A0A0MS06 115 aa20.78■□□□□ 0.92
CPNE1-202ENST00000352393 J3QT63 122 aa20.78■□□□□ 0.92
CPNE1-202ENST00000352393 CYB5R3P00387 301 aaPredicted RBP20.78■□□□□ 0.92
CPNE1-202ENST00000352393 MDH2P40926 338 aaKnown RBP20.78■□□□□ 0.92
CPNE1-202ENST00000352393 ZNF585BQ52M93 769 aa20.78■□□□□ 0.92
CPNE1-202ENST00000352393 C1orf87Q8N0U7 546 aa20.78■□□□□ 0.92
CPNE1-202ENST00000352393 PARD6GQ9BYG4 376 aaPredicted RBP20.78■□□□□ 0.92
CPNE1-202ENST00000352393 P2RX4Q99571 388 aa20.78■□□□□ 0.92
CPNE1-202ENST00000352393 LIN7CQ9NUP9 197 aaKnown RBP20.78■□□□□ 0.92
CPNE1-202ENST00000352393 TREM2Q9NZC2 230 aa20.78■□□□□ 0.92
CPNE1-202ENST00000352393 FAM166BA8MTA8 275 aa20.77■□□□□ 0.92
CPNE1-202ENST00000352393 MAGEA5P43359 124 aa20.77■□□□□ 0.92
CPNE1-202ENST00000352393 HBG1P69891 147 aa20.77■□□□□ 0.92
CPNE1-202ENST00000352393 HBG2P69892 147 aa20.77■□□□□ 0.92
CPNE1-202ENST00000352393 SERF2P84101 59 aa20.77■□□□□ 0.92
CPNE1-202ENST00000352393 OR2B11Q5JQS5 317 aa20.77■□□□□ 0.92
CPNE1-202ENST00000352393 FAM210BQ96KR6 192 aa20.77■□□□□ 0.92
CPNE1-202ENST00000352393 CDX2Q99626 313 aaPredicted RBP20.77■□□□□ 0.92
CPNE1-202ENST00000352393 PPP1R3CQ9UQK1 317 aa20.77■□□□□ 0.92
CPNE1-202ENST00000352393 TRAV39A0A0B4J263 110 aa20.77■□□□□ 0.91
CPNE1-202ENST00000352393 FGF8P55075 233 aaPredicted RBP20.77■□□□□ 0.91
CPNE1-202ENST00000352393 TTTY12Q9BZ98 90 aa20.77■□□□□ 0.91
CPNE1-202ENST00000352393 SDF2L1Q9HCN8 221 aa20.77■□□□□ 0.91
CPNE1-202ENST00000352393 ELOA3CA0A087WX78 387 aaPredicted RBP20.76■□□□□ 0.91
CPNE1-202ENST00000352393 CLDN34H7C241 214 aa20.76■□□□□ 0.91
CPNE1-202ENST00000352393 CA6P23280 308 aa20.76■□□□□ 0.91
CPNE1-202ENST00000352393 APLNRP35414 380 aa20.76■□□□□ 0.91
CPNE1-202ENST00000352393 TMEM41BQ5BJD5 291 aa20.76■□□□□ 0.91
CPNE1-202ENST00000352393 ZNF497Q6ZNH5 498 aa20.76■□□□□ 0.91
CPNE1-202ENST00000352393 NUFIP2Q7Z417 695 aaKnown RBP20.76■□□□□ 0.91
CPNE1-202ENST00000352393 HIST3H2BBQ8N257 126 aa20.76■□□□□ 0.91
CPNE1-202ENST00000352393 STRADBQ9C0K7 418 aa20.76■□□□□ 0.91
CPNE1-202ENST00000352393 WDR61Q9GZS3 305 aaKnown RBP20.76■□□□□ 0.91
CPNE1-202ENST00000352393 TMEM9BQ9NQ34 198 aa20.76■□□□□ 0.91
CPNE1-202ENST00000352393 CHD3Q12873 2000 aaKnown RBP20.76■□□□□ 0.91
CPNE1-202ENST00000352393 A0A1W2PR80 420 aa20.75■□□□□ 0.91
CPNE1-202ENST00000352393 NKX6-1P78426 367 aaPredicted RBP20.75■□□□□ 0.91
CPNE1-202ENST00000352393 IGFBP7Q16270 282 aa20.75■□□□□ 0.91
CPNE1-202ENST00000352393 OR2T2Q6IF00 324 aa20.75■□□□□ 0.91
CPNE1-202ENST00000352393 MED12LQ86YW9 2145 aa20.75■□□□□ 0.91
CPNE1-202ENST00000352393 LILRB2Q8N423 598 aa20.75■□□□□ 0.91
CPNE1-202ENST00000352393 ZNF729A6NN14 1252 aaPredicted RBP20.75■□□□□ 0.91
CPNE1-202ENST00000352393 SOD3P08294 240 aa20.75■□□□□ 0.91
CPNE1-202ENST00000352393 ZXDAP98168 799 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms