RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 OOEPA6NGQ2 149 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 ZIC3O60481 467 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 NAT2P11245 290 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 G6PCP35575 357 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 CDCP2Q5VXM1 449 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 MRPL14Q6P1L8 145 aaKnown RBP6.2□□□□□ -1.42
VCAN-202ENST00000342785 ATRAIDQ6UW56 229 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 ZBTB34Q8NCN2 500 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 OR52M1Q8NGK5 317 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 HES7Q9BYE0 225 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 C20orf202A1L168 122 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 KLK2P20151 261 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 RAB7AP51149 207 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 PRR27Q6MZM9 219 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 RSG1Q9BU20 258 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 PRDM14Q9GZV8 571 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 ZNF355PQ9NSJ1 428 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 DLL3Q9NYJ7 618 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 NAT8Q9UHE5 227 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 TUBD1Q9UJT1 453 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 EFNA2O43921 213 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 ZNF735P0CB33 412 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 ERVFC1-1P60608 527 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 TNFAIP6P98066 277 aaPredicted RBP6.2□□□□□ -1.42
VCAN-202ENST00000342785 OR2T10Q8NGZ9 312 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 OR5B3Q8NH48 314 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 MRPL30Q8TCC3 161 aaKnown RBP6.2□□□□□ -1.42
VCAN-202ENST00000342785 GMPPAQ96IJ6 420 aaPredicted RBP6.2□□□□□ -1.42
VCAN-202ENST00000342785 ZNF586Q9NXT0 402 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 H0Y980 276 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 RAB4AP20338 218 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 GALR1P47211 349 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 TMEM187Q14656 261 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 TGIF1Q15583 401 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 IZUMO4Q1ZYL8 232 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 ASPHD2Q6ICH7 369 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 OR4S2Q8NH73 311 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 IL36GQ9NZH8 169 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 MPTX1A8MV57 137 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 PITX3O75364 302 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 YIF1AO95070 293 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 SSTP61278 116 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 KDF1Q8NAX2 398 aaPredicted RBP6.19□□□□□ -1.42
VCAN-202ENST00000342785 TMEM54Q969K7 222 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 ZNF665Q9H7R5 613 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 TRGV8A0A0C4DH27 118 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 SPAARA0A1B0GVQ0 90 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 ST8SIA5O15466 376 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 NDUFB3O43676 98 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 PAGE4O60829 102 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 PGLYRP1O75594 196 aaPredicted RBP6.19□□□□□ -1.42
VCAN-202ENST00000342785 BPIFB3P59826 476 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 RHOBP62745 196 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 SERF2P84101 59 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 ZNF826PQ6ZT77 177 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 FAM214BQ7L5A3 538 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 LINC00596Q86U02 117 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 MOGAT3Q86VF5 341 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 H1FOOQ8IZA3 346 aaPredicted RBP6.19□□□□□ -1.42
VCAN-202ENST00000342785 FAM131CQ96AQ9 280 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 GPR146Q96CH1 333 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 GALNT14Q96FL9 552 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 ZNF251Q9BRH9 671 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 HES4Q9HCC6 221 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 COLQQ9Y215 455 aaPredicted RBP6.19□□□□□ -1.42
VCAN-202ENST00000342785 C11orf94C9JXX5 98 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 SMIM6P0DI80 62 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 BCL2P10415 239 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 UCP3P55916 312 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 GNB1P62873 340 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 ZNF880Q6PDB4 577 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 C17orf82Q86X59 251 aaPredicted RBP6.19□□□□□ -1.42
VCAN-202ENST00000342785 CALHM1Q8IU99 346 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 SSMEM1Q8WWF3 244 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 SLC45A2Q9UMX9 530 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 CTXND1A0A1B0GTU2 59 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 hADV38S2A0JD32 116 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 B4DEV8 164 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 H0YIZ8 118 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 ADH4P08319 380 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 SLC25A53Q5H9E4 307 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 FAM78BQ5VT40 261 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 DBX2Q6ZNG2 339 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 OR5D13Q8NGL4 314 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 BSCL2Q96G97 398 aaPredicted RBP6.19□□□□□ -1.42
VCAN-202ENST00000342785 RTBDNQ9BSG5 229 aaPredicted RBP6.19□□□□□ -1.42
VCAN-202ENST00000342785 SIRT7Q9NRC8 400 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 MIOXQ9UGB7 285 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 TRAPPC1Q9Y5R8 145 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 M0R296 226 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 COX7A2P2O60397 106 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 OR2H2O95918 312 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 CNN1P51911 297 aaKnown RBP6.19□□□□□ -1.42
VCAN-202ENST00000342785 ERVS71-1P61550 626 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 FHL1Q13642 323 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 VMA21Q3ZAQ7 101 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 SLC35E3Q7Z769 313 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 CCL17Q92583 94 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 TIMD4Q96H15 378 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 SNX22Q96L94 193 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms