RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 GSTP1P09211 210 aaKnown RBP12.93□□□□□ -0.34
BRAT1-201ENST00000340611 MMP9P14780 707 aa12.93□□□□□ -0.34
BRAT1-201ENST00000340611 ASCL1P50553 236 aa12.93□□□□□ -0.34
BRAT1-201ENST00000340611 ARF1P84077 181 aaKnown RBP12.93□□□□□ -0.34
BRAT1-201ENST00000340611 COL10A1Q03692 680 aa12.93□□□□□ -0.34
BRAT1-201ENST00000340611 C2orf50Q96LR7 162 aa12.93□□□□□ -0.34
BRAT1-201ENST00000340611 RTBDNQ9BSG5 229 aaPredicted RBP12.93□□□□□ -0.34
BRAT1-201ENST00000340611 TMEM38BQ9NVV0 291 aa12.93□□□□□ -0.34
BRAT1-201ENST00000340611 PLEK2Q9NYT0 353 aa12.93□□□□□ -0.34
BRAT1-201ENST00000340611 V9GYS6 101 aa12.93□□□□□ -0.34
BRAT1-201ENST00000340611 CCL25O15444 150 aa12.93□□□□□ -0.34
BRAT1-201ENST00000340611 CCL2P13500 99 aa12.93□□□□□ -0.34
BRAT1-201ENST00000340611 ALDH3B1P43353 468 aa12.93□□□□□ -0.34
BRAT1-201ENST00000340611 TMPRSS3P57727 454 aa12.93□□□□□ -0.34
BRAT1-201ENST00000340611 TMEM182Q6ZP80 229 aaPredicted RBP12.93□□□□□ -0.34
BRAT1-201ENST00000340611 POC1AQ8NBT0 407 aa12.93□□□□□ -0.34
BRAT1-201ENST00000340611 OR4X1Q8NH49 305 aa12.93□□□□□ -0.34
BRAT1-201ENST00000340611 APH1AQ96BI3 265 aa12.93□□□□□ -0.34
BRAT1-201ENST00000340611 GLRX2Q9NS18 164 aa12.93□□□□□ -0.34
BRAT1-201ENST00000340611 POLR3KQ9Y2Y1 108 aaPredicted RBP12.93□□□□□ -0.34
BRAT1-201ENST00000340611 BPNT1O95861 308 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 GCGP01275 180 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 TK1P04183 234 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 ZNF32P17041 273 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 HSD11B1P28845 292 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 RAB7AP51149 207 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 VAMP2P63027 116 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 VWA1Q6PCB0 445 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 GLIPR1L1Q6UWM5 242 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 COMMD2Q86X83 199 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 C1orf87Q8N0U7 546 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 OR13G1Q8NGZ3 307 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 HIST1H2AAQ96QV6 131 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 PRDM14Q9GZV8 571 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 LPAR5Q9H1C0 372 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 M0QZK8 103 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 GGCTO75223 188 aaKnown RBP12.92□□□□□ -0.34
BRAT1-201ENST00000340611 HLA-HP01893 362 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 TTRP02766 147 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 ISG15P05161 165 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 ZNF93P35789 620 aaPredicted RBP12.92□□□□□ -0.34
BRAT1-201ENST00000340611 CDKN1BP46527 198 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 MMP16P51512 607 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 ARFRP1Q13795 201 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 RSPO1Q2MKA7 263 aaPredicted RBP12.92□□□□□ -0.34
BRAT1-201ENST00000340611 CYB561D1Q8N8Q1 229 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 OR5H2Q8NGV7 314 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 LYPD6BQ8NI32 183 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 OR2J1Q9GZK6 312 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 COL12A1Q99715 3063 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 LYL1P12980 280 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 RPS2P15880 293 aaKnown RBP12.92□□□□□ -0.34
BRAT1-201ENST00000340611 AMY2BP19961 511 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 ZNF121P58317 390 aaPredicted RBP12.92□□□□□ -0.34
BRAT1-201ENST00000340611 IQCJQ1A5X6 159 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 WDR25Q64LD2 544 aaPredicted RBP12.92□□□□□ -0.34
BRAT1-201ENST00000340611 FAM57BQ71RH2 274 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 NECAP1Q8NC96 275 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 ARHGAP5-AS1Q96IT6 56 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 GINS3Q9BRX5 216 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 CLCF1Q9UBD9 225 aa12.92□□□□□ -0.34
BRAT1-201ENST00000340611 M0QZ24 198 aa12.91□□□□□ -0.34
BRAT1-201ENST00000340611 JTBO76095 146 aa12.91□□□□□ -0.34
BRAT1-201ENST00000340611 HPRT1P00492 218 aa12.91□□□□□ -0.34
BRAT1-201ENST00000340611 CHRNB4P30926 498 aa12.91□□□□□ -0.34
BRAT1-201ENST00000340611 OR3A4PP47883 348 aa12.91□□□□□ -0.34
BRAT1-201ENST00000340611 IAH1Q2TAA2 248 aaPredicted RBP12.91□□□□□ -0.34
BRAT1-201ENST00000340611 HIKESHIQ53FT3 197 aa12.91□□□□□ -0.34
BRAT1-201ENST00000340611 OR13D1Q8NGV5 346 aa12.91□□□□□ -0.34
BRAT1-201ENST00000340611 RNASEH2CQ8TDP1 164 aaKnown RBP12.91□□□□□ -0.34
BRAT1-201ENST00000340611 TP53RKQ96S44 253 aa12.91□□□□□ -0.34
BRAT1-201ENST00000340611 ABHD14AQ9BUJ0 271 aa12.91□□□□□ -0.34
BRAT1-201ENST00000340611 DKK4Q9UBT3 224 aa12.91□□□□□ -0.34
BRAT1-201ENST00000340611 ZNF878C9JN71 531 aa12.91□□□□□ -0.34
BRAT1-201ENST00000340611 LCATP04180 440 aa12.91□□□□□ -0.34
BRAT1-201ENST00000340611 OR3A2P47893 321 aa12.91□□□□□ -0.34
BRAT1-201ENST00000340611 GLIPR1P48060 266 aa12.91□□□□□ -0.34
BRAT1-201ENST00000340611 TMEM50BP56557 158 aa12.91□□□□□ -0.34
BRAT1-201ENST00000340611 MRPS34P82930 218 aaKnown RBP12.91□□□□□ -0.34
BRAT1-201ENST00000340611 TDRG1Q3Y452 100 aa12.91□□□□□ -0.34
BRAT1-201ENST00000340611 SLC16A14Q7RTX9 510 aa12.91□□□□□ -0.34
BRAT1-201ENST00000340611 CMTM1Q8IZ96 169 aa12.91□□□□□ -0.34
BRAT1-201ENST00000340611 OR51E1Q8TCB6 317 aa12.91□□□□□ -0.34
BRAT1-201ENST00000340611 TMEM37Q8WXS4 190 aa12.91□□□□□ -0.34
BRAT1-201ENST00000340611 SARAFQ96BY9 339 aa12.91□□□□□ -0.34
BRAT1-201ENST00000340611 MSL2Q9HCI7 577 aa12.91□□□□□ -0.34
BRAT1-201ENST00000340611 PLSCR2Q9NRY7 297 aa12.91□□□□□ -0.34
BRAT1-201ENST00000340611 FAM206AQ9NX38 181 aa12.91□□□□□ -0.34
BRAT1-201ENST00000340611 MRPS28Q9Y2Q9 187 aaKnown RBP12.91□□□□□ -0.34
BRAT1-201ENST00000340611 TMEM14DPA8MWL7 114 aa12.9□□□□□ -0.34
BRAT1-201ENST00000340611 HSD17B6O14756 317 aa12.9□□□□□ -0.34
BRAT1-201ENST00000340611 DANCRP0C864 163 aa12.9□□□□□ -0.34
BRAT1-201ENST00000340611 ZNF133P52736 654 aaPredicted RBP12.9□□□□□ -0.34
BRAT1-201ENST00000340611 RNPS1Q15287 305 aaKnown RBP12.9□□□□□ -0.34
BRAT1-201ENST00000340611 CPT1CQ8TCG5 803 aa12.9□□□□□ -0.34
BRAT1-201ENST00000340611 TMEM45BQ96B21 275 aa12.9□□□□□ -0.34
BRAT1-201ENST00000340611 SDSLQ96GA7 329 aa12.9□□□□□ -0.34
BRAT1-201ENST00000340611 ZFYVE26Q68DK2 2539 aa12.9□□□□□ -0.34
BRAT1-201ENST00000340611 PET100P0DJ07 73 aa12.9□□□□□ -0.34
BRAT1-201ENST00000340611 HIST1H1DP16402 221 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms