RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 FGF7P21781 194 aa12.13□□□□□ -0.47
PCDH8-201ENST00000338862 G6PCP35575 357 aa12.13□□□□□ -0.47
PCDH8-201ENST00000338862 HOXA4Q00056 320 aaPredicted RBP12.13□□□□□ -0.47
PCDH8-201ENST00000338862 TGIF2LXQ8IUE1 241 aa12.13□□□□□ -0.47
PCDH8-201ENST00000338862 OR4C12Q96R67 309 aa12.13□□□□□ -0.47
PCDH8-201ENST00000338862 TAAR9Q96RI9 348 aa12.13□□□□□ -0.47
PCDH8-201ENST00000338862 GCM1Q9NP62 436 aa12.13□□□□□ -0.47
PCDH8-201ENST00000338862 OBP2BQ9NPH6 170 aa12.13□□□□□ -0.47
PCDH8-201ENST00000338862 EML6Q6ZMW3 1958 aa12.13□□□□□ -0.47
PCDH8-201ENST00000338862 IFNL4K9M1U5 179 aa12.13□□□□□ -0.47
PCDH8-201ENST00000338862 HOXB1P14653 301 aaPredicted RBP12.13□□□□□ -0.47
PCDH8-201ENST00000338862 SPSB3Q6PJ21 355 aa12.13□□□□□ -0.47
PCDH8-201ENST00000338862 OR51I2Q9H344 312 aa12.13□□□□□ -0.47
PCDH8-201ENST00000338862 ZNF552Q9H707 407 aaPredicted RBP12.13□□□□□ -0.47
PCDH8-201ENST00000338862 SUCLG1P53597 346 aaKnown RBP12.13□□□□□ -0.47
PCDH8-201ENST00000338862 FFAR4Q5NUL3 377 aa12.13□□□□□ -0.47
PCDH8-201ENST00000338862 AGBL5Q8NDL9 886 aa12.13□□□□□ -0.47
PCDH8-201ENST00000338862 CLDND2Q8NHS1 167 aa12.13□□□□□ -0.47
PCDH8-201ENST00000338862 WNT5BQ9H1J7 359 aa12.13□□□□□ -0.47
PCDH8-201ENST00000338862 ARV1Q9H2C2 271 aa12.13□□□□□ -0.47
PCDH8-201ENST00000338862 RIF1Q5UIP0 2472 aaKnown RBP12.12□□□□□ -0.47
PCDH8-201ENST00000338862 GATCO43716 136 aaKnown RBP12.12□□□□□ -0.47
PCDH8-201ENST00000338862 ZIC3O60481 467 aa12.12□□□□□ -0.47
PCDH8-201ENST00000338862 SRFP11831 508 aa12.12□□□□□ -0.47
PCDH8-201ENST00000338862 F2RP25116 425 aa12.12□□□□□ -0.47
PCDH8-201ENST00000338862 NABP1Q96AH0 204 aa12.12□□□□□ -0.47
PCDH8-201ENST00000338862 CBLN4Q9NTU7 201 aa12.12□□□□□ -0.47
PCDH8-201ENST00000338862 PGPEP1LA6NFU8 196 aa12.12□□□□□ -0.47
PCDH8-201ENST00000338862 FAM157AC9JC47 383 aa12.12□□□□□ -0.47
PCDH8-201ENST00000338862 RPL36A-HNRNPH2H7BZ11 118 aa12.12□□□□□ -0.47
PCDH8-201ENST00000338862 NTF4P34130 210 aa12.12□□□□□ -0.47
PCDH8-201ENST00000338862 RAC3P60763 192 aa12.12□□□□□ -0.47
PCDH8-201ENST00000338862 P2RY6Q15077 328 aa12.12□□□□□ -0.47
PCDH8-201ENST00000338862 CPEB3Q8NE35 698 aaKnown RBP12.12□□□□□ -0.47
PCDH8-201ENST00000338862 OR2V1Q8NHB1 315 aa12.12□□□□□ -0.47
PCDH8-201ENST00000338862 SAMD10Q9BYL1 202 aa12.12□□□□□ -0.47
PCDH8-201ENST00000338862 KCNIP1Q9NZI2 227 aa12.12□□□□□ -0.47
PCDH8-201ENST00000338862 CCL1P22362 96 aa12.12□□□□□ -0.47
PCDH8-201ENST00000338862 MDH2P40926 338 aaKnown RBP12.12□□□□□ -0.47
PCDH8-201ENST00000338862 CYB561P49447 251 aa12.12□□□□□ -0.47
PCDH8-201ENST00000338862 IL24Q13007 206 aa12.12□□□□□ -0.47
PCDH8-201ENST00000338862 OR8G1Q15617 311 aa12.12□□□□□ -0.47
PCDH8-201ENST00000338862 TMEM211Q6ICI0 200 aa12.12□□□□□ -0.47
PCDH8-201ENST00000338862 ABHD5Q8WTS1 349 aa12.12□□□□□ -0.47
PCDH8-201ENST00000338862 RCC1LQ96I51 464 aaKnown RBP12.12□□□□□ -0.47
PCDH8-201ENST00000338862 ANGPTL4Q9BY76 406 aa12.12□□□□□ -0.47
PCDH8-201ENST00000338862 HES7Q9BYE0 225 aa12.12□□□□□ -0.47
PCDH8-201ENST00000338862 SEBOXQ9HB31 216 aaPredicted RBP12.12□□□□□ -0.47
PCDH8-201ENST00000338862 GPR35Q9HC97 309 aa12.12□□□□□ -0.47
PCDH8-201ENST00000338862 TTC28Q96AY4 2481 aa12.12□□□□□ -0.47
PCDH8-201ENST00000338862 FREM2Q5SZK8 3169 aa12.12□□□□□ -0.47
PCDH8-201ENST00000338862 GTF3C1Q12789 2109 aa12.11□□□□□ -0.47
PCDH8-201ENST00000338862 LRRC3CA6NJW4 275 aa12.11□□□□□ -0.47
PCDH8-201ENST00000338862 TCAPO15273 167 aa12.11□□□□□ -0.47
PCDH8-201ENST00000338862 RHBDL1O75783 438 aa12.11□□□□□ -0.47
PCDH8-201ENST00000338862 COL10A1Q03692 680 aa12.11□□□□□ -0.47
PCDH8-201ENST00000338862 OR4D5Q8NGN0 318 aa12.11□□□□□ -0.47
PCDH8-201ENST00000338862 C14orf144Q96I85 54 aa12.11□□□□□ -0.47
PCDH8-201ENST00000338862 CEACAM18A8MTB9 384 aa12.11□□□□□ -0.47
PCDH8-201ENST00000338862 HSPB1P04792 205 aaKnown RBP12.11□□□□□ -0.47
PCDH8-201ENST00000338862 ZIC4Q8N9L1 334 aa12.11□□□□□ -0.47
PCDH8-201ENST00000338862 OR10G4Q8NGN3 311 aa12.11□□□□□ -0.47
PCDH8-201ENST00000338862 OR10G9Q8NGN4 311 aa12.11□□□□□ -0.47
PCDH8-201ENST00000338862 OR10G7Q8NGN6 311 aa12.11□□□□□ -0.47
PCDH8-201ENST00000338862 MRPL30Q8TCC3 161 aaKnown RBP12.11□□□□□ -0.47
PCDH8-201ENST00000338862 CDIPTO14735 213 aa12.11□□□□□ -0.47
PCDH8-201ENST00000338862 RRP8O43159 456 aaKnown RBP12.11□□□□□ -0.47
PCDH8-201ENST00000338862 SYNGR3O43761 229 aa12.11□□□□□ -0.47
PCDH8-201ENST00000338862 THBS3P49746 956 aa12.11□□□□□ -0.47
PCDH8-201ENST00000338862 ARG2P78540 354 aa12.11□□□□□ -0.47
PCDH8-201ENST00000338862 FAM53AQ6NSI3 398 aaPredicted RBP12.11□□□□□ -0.47
PCDH8-201ENST00000338862 MISP3Q96FF7 219 aa12.11□□□□□ -0.47
PCDH8-201ENST00000338862 DEFB127Q9H1M4 99 aa12.11□□□□□ -0.47
PCDH8-201ENST00000338862 NPIPB13A6NJU9 1138 aa12.1□□□□□ -0.47
PCDH8-201ENST00000338862 NPIPB4C9JG80 1138 aa12.1□□□□□ -0.47
PCDH8-201ENST00000338862 ALKBH6Q3KRA9 238 aa12.1□□□□□ -0.47
PCDH8-201ENST00000338862 FAM58AQ8N1B3 248 aa12.1□□□□□ -0.47
PCDH8-201ENST00000338862 HIST3H2BBQ8N257 126 aa12.1□□□□□ -0.47
PCDH8-201ENST00000338862 SERTAD4Q9NUC0 356 aa12.1□□□□□ -0.47
PCDH8-201ENST00000338862 MTCH1Q9NZJ7 389 aa12.1□□□□□ -0.47
PCDH8-201ENST00000338862 CRIM1Q9NZV1 1036 aa12.1□□□□□ -0.47
PCDH8-201ENST00000338862 IL17BQ9UHF5 180 aa12.1□□□□□ -0.47
PCDH8-201ENST00000338862 A0A1B0GUS0 222 aa12.1□□□□□ -0.47
PCDH8-201ENST00000338862 GRIFINA4D1Z8 144 aa12.1□□□□□ -0.47
PCDH8-201ENST00000338862 LINC00205P59089 165 aa12.1□□□□□ -0.47
PCDH8-201ENST00000338862 PKIAP61925 76 aa12.1□□□□□ -0.47
PCDH8-201ENST00000338862 SLC35B1P78383 322 aa12.1□□□□□ -0.47
PCDH8-201ENST00000338862 WDR74Q6RFH5 385 aaPredicted RBP12.1□□□□□ -0.47
PCDH8-201ENST00000338862 GCNT2Q8N0V5 402 aa12.1□□□□□ -0.47
PCDH8-201ENST00000338862 PDLIM3Q53GG5 364 aaPredicted RBP12.1□□□□□ -0.47
PCDH8-201ENST00000338862 ABHD17BQ5VST6 288 aa12.1□□□□□ -0.47
PCDH8-201ENST00000338862 Q6ZRM9 215 aa12.1□□□□□ -0.47
PCDH8-201ENST00000338862 KMT5CQ86Y97 462 aa12.1□□□□□ -0.47
PCDH8-201ENST00000338862 OR51G1Q8NGK1 321 aa12.1□□□□□ -0.47
PCDH8-201ENST00000338862 IER2Q9BTL4 223 aa12.1□□□□□ -0.47
PCDH8-201ENST00000338862 IFITM10A6NMD0 228 aa12.09□□□□□ -0.47
PCDH8-201ENST00000338862 OPN1MWP04001 364 aa12.09□□□□□ -0.47
PCDH8-201ENST00000338862 CELA3AP09093 270 aa12.09□□□□□ -0.47
PCDH8-201ENST00000338862 OPN1MW2P0DN77 364 aa12.09□□□□□ -0.47
PCDH8-201ENST00000338862 OPN1MW3P0DN78 364 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms