RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 RAB12Q6IQ22 244 aa8.91□□□□□ -0.98
C9orf85-201ENST00000334731 FAM53AQ6NSI3 398 aaPredicted RBP8.91□□□□□ -0.98
C9orf85-201ENST00000334731 UNQ9370/PRO34162Q6UXP9 181 aa8.91□□□□□ -0.98
C9orf85-201ENST00000334731 OR8H3Q8N146 312 aa8.91□□□□□ -0.98
C9orf85-201ENST00000334731 GAPTQ8N292 157 aa8.91□□□□□ -0.98
C9orf85-201ENST00000334731 LINC00311Q8N616 119 aa8.91□□□□□ -0.98
C9orf85-201ENST00000334731 C8orf31Q8N9H6 132 aa8.91□□□□□ -0.98
C9orf85-201ENST00000334731 TMEM104Q8NE00 496 aa8.91□□□□□ -0.98
C9orf85-201ENST00000334731 UQCC2Q9BRT2 126 aa8.91□□□□□ -0.98
C9orf85-201ENST00000334731 BANF2Q9H503 90 aa8.91□□□□□ -0.98
C9orf85-201ENST00000334731 GFOD1Q9NXC2 390 aa8.91□□□□□ -0.98
C9orf85-201ENST00000334731 MOB4Q9Y3A3 225 aa8.91□□□□□ -0.98
C9orf85-201ENST00000334731 PEX16Q9Y5Y5 336 aa8.91□□□□□ -0.98
C9orf85-201ENST00000334731 IGHV3-43A0A0B4J1X8 118 aa8.9□□□□□ -0.98
C9orf85-201ENST00000334731 A0A1W2PRX2 142 aa8.9□□□□□ -0.98
C9orf85-201ENST00000334731 TCRBV4S1A1TA0A5B7 111 aa8.9□□□□□ -0.98
C9orf85-201ENST00000334731 FAM90A10PA6NDY2 464 aa8.9□□□□□ -0.98
C9orf85-201ENST00000334731 FAM90A7PA6NKC0 464 aa8.9□□□□□ -0.98
C9orf85-201ENST00000334731 FAM90A23PA8MXZ1 464 aa8.9□□□□□ -0.98
C9orf85-201ENST00000334731 C12orf77C9JDV5 145 aa8.9□□□□□ -0.98
C9orf85-201ENST00000334731 AIPO00170 330 aa8.9□□□□□ -0.98
C9orf85-201ENST00000334731 CCRL2O00421 344 aa8.9□□□□□ -0.98
C9orf85-201ENST00000334731 CRTAPO75718 401 aaPredicted RBP8.9□□□□□ -0.98
C9orf85-201ENST00000334731 IGKV1D-33P01593 117 aa8.9□□□□□ -0.98
C9orf85-201ENST00000334731 IGKV1-33P01594 117 aa8.9□□□□□ -0.98
C9orf85-201ENST00000334731 GAPDHP04406 335 aaKnown RBP8.9□□□□□ -0.98
C9orf85-201ENST00000334731 IGHV3-43DP0DP04 118 aa8.9□□□□□ -0.98
C9orf85-201ENST00000334731 MGMTP16455 207 aa8.9□□□□□ -0.98
C9orf85-201ENST00000334731 MAPK3P27361 379 aaPredicted RBP8.9□□□□□ -0.98
C9orf85-201ENST00000334731 ZNF816Q0VGE8 651 aaPredicted RBP8.9□□□□□ -0.98
C9orf85-201ENST00000334731 HES1Q14469 280 aa8.9□□□□□ -0.98
C9orf85-201ENST00000334731 HNF4GQ14541 408 aa8.9□□□□□ -0.98
C9orf85-201ENST00000334731 SIGIRRQ6IA17 410 aa8.9□□□□□ -0.98
C9orf85-201ENST00000334731 C10orf99Q6UWK7 81 aa8.9□□□□□ -0.98
C9orf85-201ENST00000334731 MS4A15Q8N5U1 240 aa8.9□□□□□ -0.98
C9orf85-201ENST00000334731 NKAIN3Q8N8D7 197 aa8.9□□□□□ -0.98
C9orf85-201ENST00000334731 WFDC9Q8NEX5 89 aa8.9□□□□□ -0.98
C9orf85-201ENST00000334731 THRSPQ92748 146 aa8.9□□□□□ -0.98
C9orf85-201ENST00000334731 MYDGFQ969H8 173 aa8.9□□□□□ -0.98
C9orf85-201ENST00000334731 CYYR1Q96J86 154 aa8.9□□□□□ -0.98
C9orf85-201ENST00000334731 MND1Q9BWT6 205 aa8.9□□□□□ -0.98
C9orf85-201ENST00000334731 SELENOIQ9C0D9 397 aa8.9□□□□□ -0.98
C9orf85-201ENST00000334731 LSM2Q9Y333 95 aaKnown RBP8.9□□□□□ -0.98
C9orf85-201ENST00000334731 IGHV1-3A0A0C4DH29 117 aa8.89□□□□□ -0.99
C9orf85-201ENST00000334731 HSD17B6O14756 317 aa8.89□□□□□ -0.99
C9orf85-201ENST00000334731 SPINT2O43291 252 aa8.89□□□□□ -0.99
C9orf85-201ENST00000334731 CA11O75493 328 aa8.89□□□□□ -0.99
C9orf85-201ENST00000334731 SC5DO75845 299 aa8.89□□□□□ -0.99
C9orf85-201ENST00000334731 GLAP06280 429 aa8.89□□□□□ -0.99
C9orf85-201ENST00000334731 TMEM11P17152 192 aa8.89□□□□□ -0.99
C9orf85-201ENST00000334731 RCC1P18754 421 aaPredicted RBP8.89□□□□□ -0.99
C9orf85-201ENST00000334731 FUT3P21217 361 aa8.89□□□□□ -0.99
C9orf85-201ENST00000334731 REG1BP48304 166 aa8.89□□□□□ -0.99
C9orf85-201ENST00000334731 ZNF134P52741 427 aa8.89□□□□□ -0.99
C9orf85-201ENST00000334731 GABARAPL2P60520 117 aa8.89□□□□□ -0.99
C9orf85-201ENST00000334731 EBI3Q14213 229 aa8.89□□□□□ -0.99
C9orf85-201ENST00000334731 SPHARQ15513 63 aa8.89□□□□□ -0.99
C9orf85-201ENST00000334731 Q3ZCU0 254 aa8.89□□□□□ -0.99
C9orf85-201ENST00000334731 FAM27D1Q5T7N8 215 aa8.89□□□□□ -0.99
C9orf85-201ENST00000334731 MOB3BQ86TA1 216 aa8.89□□□□□ -0.99
C9orf85-201ENST00000334731 LRRTM1Q86UE6 522 aa8.89□□□□□ -0.99
C9orf85-201ENST00000334731 C5orf56Q8N8D9 126 aa8.89□□□□□ -0.99
C9orf85-201ENST00000334731 OR4K15Q8NH41 348 aa8.89□□□□□ -0.99
C9orf85-201ENST00000334731 SGCDQ92629 289 aa8.89□□□□□ -0.99
C9orf85-201ENST00000334731 ST6GALNAC6Q969X2 333 aa8.89□□□□□ -0.99
C9orf85-201ENST00000334731 Q96M66 194 aa8.89□□□□□ -0.99
C9orf85-201ENST00000334731 GHRLQ9UBU3 117 aa8.89□□□□□ -0.99
C9orf85-201ENST00000334731 TRAPPC2LQ9UL33 140 aa8.89□□□□□ -0.99
C9orf85-201ENST00000334731 TSSC4Q9Y5U2 329 aaPredicted RBP8.89□□□□□ -0.99
C9orf85-201ENST00000334731 PRKDCP78527 4128 aaKnown RBP8.88□□□□□ -0.99
C9orf85-201ENST00000334731 IGHV3-72A0A0B4J1Y9 119 aa8.88□□□□□ -0.99
C9orf85-201ENST00000334731 UBE2QL1A1L167 161 aa8.88□□□□□ -0.99
C9orf85-201ENST00000334731 SLC31A2O15432 143 aa8.88□□□□□ -0.99
C9orf85-201ENST00000334731 FGF16O43320 207 aa8.88□□□□□ -0.99
C9orf85-201ENST00000334731 HBZP02008 142 aa8.88□□□□□ -0.99
C9orf85-201ENST00000334731 PRB2P02812 416 aaPredicted RBP8.88□□□□□ -0.99
C9orf85-201ENST00000334731 SLC35A2P78381 396 aa8.88□□□□□ -0.99
C9orf85-201ENST00000334731 GPR50Q13585 617 aa8.88□□□□□ -0.99
C9orf85-201ENST00000334731 IRF3Q14653 427 aa8.88□□□□□ -0.99
C9orf85-201ENST00000334731 OXA1LQ15070 435 aa8.88□□□□□ -0.99
C9orf85-201ENST00000334731 CT45A1Q5HYN5 189 aa8.88□□□□□ -0.99
C9orf85-201ENST00000334731 C6orf183Q5T699 404 aa8.88□□□□□ -0.99
C9orf85-201ENST00000334731 ZNF773Q6PK81 442 aa8.88□□□□□ -0.99
C9orf85-201ENST00000334731 SLC25A48Q6ZT89 311 aaKnown RBP8.88□□□□□ -0.99
C9orf85-201ENST00000334731 CEACAM19Q7Z692 300 aa8.88□□□□□ -0.99
C9orf85-201ENST00000334731 Q8N6K4 173 aa8.88□□□□□ -0.99
C9orf85-201ENST00000334731 ZNF439Q8NDP4 499 aa8.88□□□□□ -0.99
C9orf85-201ENST00000334731 OR4X2Q8NGF9 303 aa8.88□□□□□ -0.99
C9orf85-201ENST00000334731 OR1L1Q8NH94 360 aa8.88□□□□□ -0.99
C9orf85-201ENST00000334731 CT45A3Q8NHU0 189 aa8.88□□□□□ -0.99
C9orf85-201ENST00000334731 RTN4IP1Q8WWV3 396 aaPredicted RBP8.88□□□□□ -0.99
C9orf85-201ENST00000334731 PHYHIPQ92561 330 aa8.88□□□□□ -0.99
C9orf85-201ENST00000334731 FAM46BQ96A09 425 aa8.88□□□□□ -0.99
C9orf85-201ENST00000334731 EAF1Q96JC9 268 aaPredicted RBP8.88□□□□□ -0.99
C9orf85-201ENST00000334731 NOL4LQ96MY1 436 aaPredicted RBP8.88□□□□□ -0.99
C9orf85-201ENST00000334731 DCUN1D5Q9BTE7 237 aa8.88□□□□□ -0.99
C9orf85-201ENST00000334731 TMED9Q9BVK6 235 aa8.88□□□□□ -0.99
C9orf85-201ENST00000334731 SCN3BQ9NY72 215 aa8.88□□□□□ -0.99
C9orf85-201ENST00000334731 GNG12Q9UBI6 72 aa8.88□□□□□ -0.99
C9orf85-201ENST00000334731 NOTCH3Q9UM47 2321 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms