RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 SEC22BO75396 215 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 B3GALNT1O75752 331 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 DCTN3O75935 186 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 PTTG1O95997 202 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 KLK1P06870 262 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 IL3P08700 152 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 ANXA4P09525 319 aaPredicted RBP1.05□□□□□ -2.24
LINC00643-201ENST00000334389 ZNF728P0DKX0 622 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 T-ENOLP0DO92 83 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 VDAC1P21796 283 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 SLC2A5P22732 501 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 CRABP1P29762 137 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 S100A7P31151 101 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 GNALP38405 381 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 GDF5P43026 501 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 NKX2-1P43699 371 aaPredicted RBP1.05□□□□□ -2.24
LINC00643-201ENST00000334389 SLC1A6P48664 564 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 ARF6P62330 175 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 SRPXP78539 464 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 PUDPQ08623 228 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 C2orf80Q0P641 193 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 EXOC3L2Q2M3D2 409 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 ZNF684Q5T5D7 378 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 THEMIS2Q5TEJ8 643 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 MEDAGQ5VYS4 303 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 BICRALQ6AI39 1079 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 ZNF773Q6PK81 442 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 CASP12Q6UXS9 341 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 ZNF767PQ75MW2 155 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 PDPNQ86YL7 162 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 SNX29P2Q8IUI4 249 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 APRG1Q8IVJ8 170 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 SKA3Q8IX90 412 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 OR8H2Q8N162 312 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 CLEC4FQ8N1N0 589 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 SYS1Q8N2H4 156 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 CLDN19Q8N6F1 224 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 OR56B2PQ8NGI1 322 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 R3HDM4Q96D70 268 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 MRPL53Q96EL3 112 aaKnown RBP1.05□□□□□ -2.24
LINC00643-201ENST00000334389 ZNF582Q96NG8 517 aaPredicted RBP1.05□□□□□ -2.24
LINC00643-201ENST00000334389 PRSS27Q9BQR3 290 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 C2orf88Q9BSF0 95 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 HCAR1Q9BXC0 346 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 SEMA6AQ9H2E6 1030 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 NMNAT1Q9HAN9 279 aaPredicted RBP1.05□□□□□ -2.24
LINC00643-201ENST00000334389 CACYBPQ9HB71 228 aaKnown RBP1.05□□□□□ -2.24
LINC00643-201ENST00000334389 IL1RAPQ9NPH3 570 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 CMTM6Q9NX76 183 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 CCDC59Q9P031 241 aaKnown RBP1.05□□□□□ -2.24
LINC00643-201ENST00000334389 NLKQ9UBE8 527 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 GIMAP2Q9UG22 337 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 KIF25Q9UIL4 384 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 JPT1Q9UK76 154 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 ELF5Q9UKW6 265 aaPredicted RBP1.05□□□□□ -2.24
LINC00643-201ENST00000334389 PAIP2BQ9ULR5 123 aaKnown RBP1.05□□□□□ -2.24
LINC00643-201ENST00000334389 DIMT1Q9UNQ2 313 aaKnown RBP1.05□□□□□ -2.24
LINC00643-201ENST00000334389 EXOGQ9Y2C4 368 aaKnown RBP1.05□□□□□ -2.24
LINC00643-201ENST00000334389 RNF11Q9Y3C5 154 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 FBXO7Q9Y3I1 522 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 CRYBG3Q68DQ2 2970 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 MYO15AQ9UKN7 3530 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 CELSR3Q9NYQ7 3312 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 TRIOO75962 3097 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 A0A087WTM6 91 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 OR4C46A6NHA9 309 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 CBY3A6NI87 242 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 NOTOA8MTQ0 251 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 F8VVB4 439 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 F8VWA3 439 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 GSTA4O15217 222 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 RBFOX2O43251 390 aaKnown RBP eCLIP1.04□□□□□ -2.24
LINC00643-201ENST00000334389 TPST1O60507 370 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 YPEL1O60688 119 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 MTX2O75431 263 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 SCAF4O95104 1147 aaKnown RBP1.04□□□□□ -2.24
LINC00643-201ENST00000334389 PPBPP02775 128 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 GAPDHP04406 335 aaKnown RBP1.04□□□□□ -2.24
LINC00643-201ENST00000334389 CLEC2LP0C7M8 214 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 SMIM6P0DI80 62 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 G6PDP11413 515 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 SCGB1A1P11684 91 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 PSMA1P25786 263 aaKnown RBP1.04□□□□□ -2.24
LINC00643-201ENST00000334389 MAPK3P27361 379 aaPredicted RBP1.04□□□□□ -2.24
LINC00643-201ENST00000334389 SSTR1P30872 391 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 YAP1P46937 504 aaKnown RBP1.04□□□□□ -2.24
LINC00643-201ENST00000334389 LGALS7P47929 136 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 RAB1AP62820 205 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 SELENOWP63302 87 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 FLI1Q01543 452 aaPredicted RBP1.04□□□□□ -2.24
LINC00643-201ENST00000334389 MALLQ13021 153 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 TRAM2Q15035 370 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 TRAM1Q15629 374 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 DNAL1Q4LDG9 190 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 SAMD4BQ5PRF9 694 aaKnown RBP1.04□□□□□ -2.24
LINC00643-201ENST00000334389 C12orf73Q69YU5 71 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 AADACL2Q6P093 401 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 C16orf89Q6UX73 402 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 TOMM20LQ6UXN7 152 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 RDH10Q8IZV5 341 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms