RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 IGKV1-13P0DP09 117 aa15.49■□□□□ 0.07
CLSTN3-202ENST00000331148 RBM11P57052 281 aaKnown RBP15.49■□□□□ 0.07
CLSTN3-202ENST00000331148 PRSS8Q16651 343 aa15.49■□□□□ 0.07
CLSTN3-202ENST00000331148 EXPH5Q8NEV8 1989 aa15.49■□□□□ 0.07
CLSTN3-202ENST00000331148 A0A0G2JRQ6 117 aa15.48■□□□□ 0.07
CLSTN3-202ENST00000331148 RPLP1P05386 114 aaKnown RBP15.48■□□□□ 0.07
CLSTN3-202ENST00000331148 CST2P09228 141 aa15.48■□□□□ 0.07
CLSTN3-202ENST00000331148 PTGDSP41222 190 aa15.48■□□□□ 0.07
CLSTN3-202ENST00000331148 RPS18P62269 152 aaKnown RBP15.48■□□□□ 0.07
CLSTN3-202ENST00000331148 TMEM41BQ5BJD5 291 aa15.48■□□□□ 0.07
CLSTN3-202ENST00000331148 FAM180AQ6UWF9 173 aa15.48■□□□□ 0.07
CLSTN3-202ENST00000331148 IL22RA2Q969J5 263 aa15.48■□□□□ 0.07
CLSTN3-202ENST00000331148 RPUSD4Q96CM3 377 aaKnown RBP15.48■□□□□ 0.07
CLSTN3-202ENST00000331148 WFIKKN1Q96NZ8 548 aa15.48■□□□□ 0.07
CLSTN3-202ENST00000331148 OR51I2Q9H344 312 aa15.48■□□□□ 0.07
CLSTN3-202ENST00000331148 IL17BQ9UHF5 180 aa15.48■□□□□ 0.07
CLSTN3-202ENST00000331148 LOC102725191A0A1B0GVB3 256 aa15.48■□□□□ 0.07
CLSTN3-202ENST00000331148 SLC22A20A6NK97 555 aa15.48■□□□□ 0.07
CLSTN3-202ENST00000331148 MEF2BQ02080 365 aaPredicted RBP15.48■□□□□ 0.07
CLSTN3-202ENST00000331148 GAGE1Q13065 139 aa15.48■□□□□ 0.07
CLSTN3-202ENST00000331148 DAZAP2Q15038 168 aaPredicted RBP15.48■□□□□ 0.07
CLSTN3-202ENST00000331148 RNPS1Q15287 305 aaKnown RBP15.48■□□□□ 0.07
CLSTN3-202ENST00000331148 ZNF525Q8N782 197 aa15.48■□□□□ 0.07
CLSTN3-202ENST00000331148 TMEM54Q969K7 222 aa15.48■□□□□ 0.07
CLSTN3-202ENST00000331148 OR6C3Q9NZP0 311 aa15.48■□□□□ 0.07
CLSTN3-202ENST00000331148 NCOA6Q14686 2063 aaPredicted RBP15.48■□□□□ 0.07
CLSTN3-202ENST00000331148 IGLV3-32A0A0A0MS00 114 aa15.47■□□□□ 0.07
CLSTN3-202ENST00000331148 H0Y980 276 aa15.47■□□□□ 0.07
CLSTN3-202ENST00000331148 M0QZK8 103 aa15.47■□□□□ 0.07
CLSTN3-202ENST00000331148 GGCTO75223 188 aaKnown RBP15.47■□□□□ 0.07
CLSTN3-202ENST00000331148 OR7C1O76099 320 aaPredicted RBP15.47■□□□□ 0.07
CLSTN3-202ENST00000331148 TYMSP04818 313 aa15.47■□□□□ 0.07
CLSTN3-202ENST00000331148 NPSP0C0P6 89 aa15.47■□□□□ 0.07
CLSTN3-202ENST00000331148 BTNL3Q6UXE8 466 aa15.47■□□□□ 0.07
CLSTN3-202ENST00000331148 OR2T10Q8NGZ9 312 aa15.47■□□□□ 0.07
CLSTN3-202ENST00000331148 RAB40CQ96S21 281 aa15.47■□□□□ 0.07
CLSTN3-202ENST00000331148 PLK3Q9H4B4 646 aa15.47■□□□□ 0.07
CLSTN3-202ENST00000331148 NAGKQ9UJ70 344 aa15.47■□□□□ 0.07
CLSTN3-202ENST00000331148 A6NNC1 897 aa15.47■□□□□ 0.07
CLSTN3-202ENST00000331148 KIAA1324LA8MWY0 1029 aaPredicted RBP15.47■□□□□ 0.07
CLSTN3-202ENST00000331148 GDF9O60383 454 aa15.47■□□□□ 0.07
CLSTN3-202ENST00000331148 NRASP01111 189 aa15.47■□□□□ 0.07
CLSTN3-202ENST00000331148 CRYABP02511 175 aaKnown RBP15.47■□□□□ 0.07
CLSTN3-202ENST00000331148 RPL29P47914 159 aaKnown RBP15.47■□□□□ 0.07
CLSTN3-202ENST00000331148 CISD2Q8N5K1 135 aaKnown RBP15.47■□□□□ 0.07
CLSTN3-202ENST00000331148 RBM24Q9BX46 236 aaKnown RBP15.47■□□□□ 0.07
CLSTN3-202ENST00000331148 METTL7AQ9H8H3 244 aa15.47■□□□□ 0.07
CLSTN3-202ENST00000331148 CCL28Q9NRJ3 127 aa15.47■□□□□ 0.07
CLSTN3-202ENST00000331148 CRYGSP22914 178 aa15.46■□□□□ 0.07
CLSTN3-202ENST00000331148 OR3A1P47881 315 aa15.46■□□□□ 0.07
CLSTN3-202ENST00000331148 CNN1P51911 297 aaKnown RBP15.46■□□□□ 0.07
CLSTN3-202ENST00000331148 SERF2P84101 59 aa15.46■□□□□ 0.07
CLSTN3-202ENST00000331148 ARL16Q0P5N6 197 aa15.46■□□□□ 0.07
CLSTN3-202ENST00000331148 TMEM42Q69YG0 159 aa15.46■□□□□ 0.07
CLSTN3-202ENST00000331148 ZNF774Q6NX45 483 aa15.46■□□□□ 0.07
CLSTN3-202ENST00000331148 ZNF573Q86YE8 665 aa15.46■□□□□ 0.07
CLSTN3-202ENST00000331148 NFAM1Q8NET5 270 aaPredicted RBP15.46■□□□□ 0.07
CLSTN3-202ENST00000331148 GPR146Q96CH1 333 aa15.46■□□□□ 0.07
CLSTN3-202ENST00000331148 DHHO43323 396 aa15.46■□□□□ 0.06
CLSTN3-202ENST00000331148 GALR2O43603 387 aaPredicted RBP15.46■□□□□ 0.06
CLSTN3-202ENST00000331148 CNOT4O95628 575 aaKnown RBP15.46■□□□□ 0.06
CLSTN3-202ENST00000331148 CCL4P13236 92 aa15.46■□□□□ 0.06
CLSTN3-202ENST00000331148 LRRC75BQ2VPJ9 315 aa15.46■□□□□ 0.06
CLSTN3-202ENST00000331148 Q6ZS49 121 aa15.46■□□□□ 0.06
CLSTN3-202ENST00000331148 ANKRD37Q7Z713 158 aa15.46■□□□□ 0.06
CLSTN3-202ENST00000331148 OR2M3Q8NG83 312 aa15.46■□□□□ 0.06
CLSTN3-202ENST00000331148 OR10G3Q8NGC4 313 aa15.46■□□□□ 0.06
CLSTN3-202ENST00000331148 EXTL1Q92935 676 aa15.46■□□□□ 0.06
CLSTN3-202ENST00000331148 LHX4Q969G2 390 aa15.46■□□□□ 0.06
CLSTN3-202ENST00000331148 PARLQ9H300 379 aa15.46■□□□□ 0.06
CLSTN3-202ENST00000331148 TRBV11-1A0A0K0K1C0 115 aa15.45■□□□□ 0.06
CLSTN3-202ENST00000331148 SCTP09683 121 aa15.45■□□□□ 0.06
CLSTN3-202ENST00000331148 OR10J1P30954 320 aa15.45■□□□□ 0.06
CLSTN3-202ENST00000331148 TLE1Q04724 770 aa15.45■□□□□ 0.06
CLSTN3-202ENST00000331148 MRPL52Q86TS9 123 aaKnown RBP15.45■□□□□ 0.06
CLSTN3-202ENST00000331148 BATF2Q8N1L9 274 aa15.45■□□□□ 0.06
CLSTN3-202ENST00000331148 ANAPC16Q96DE5 110 aa15.45■□□□□ 0.06
CLSTN3-202ENST00000331148 ZNF385AQ96PM9 386 aaKnown RBP15.45■□□□□ 0.06
CLSTN3-202ENST00000331148 REPIN1Q9BWE0 567 aaKnown RBP15.45■□□□□ 0.06
CLSTN3-202ENST00000331148 TMEM250H0YL14 139 aa15.45■□□□□ 0.06
CLSTN3-202ENST00000331148 TUSC2O75896 110 aa15.45■□□□□ 0.06
CLSTN3-202ENST00000331148 SRP14P37108 136 aaKnown RBP15.45■□□□□ 0.06
CLSTN3-202ENST00000331148 ZNF92Q03936 586 aa15.45■□□□□ 0.06
CLSTN3-202ENST00000331148 HAPLN4Q86UW8 402 aa15.45■□□□□ 0.06
CLSTN3-202ENST00000331148 OR10J5Q8NHC4 309 aa15.45■□□□□ 0.06
CLSTN3-202ENST00000331148 PINX1Q96BK5 328 aaKnown RBP15.45■□□□□ 0.06
CLSTN3-202ENST00000331148 RALGAPA1Q6GYQ0 2036 aa15.45■□□□□ 0.06
CLSTN3-202ENST00000331148 WDR87Q6ZQQ6 2873 aa15.44■□□□□ 0.06
CLSTN3-202ENST00000331148 KMT2EQ8IZD2 1858 aa15.44■□□□□ 0.06
CLSTN3-202ENST00000331148 CDX4O14627 284 aaPredicted RBP15.44■□□□□ 0.06
CLSTN3-202ENST00000331148 ZNF705AQ6ZN79 300 aaPredicted RBP15.44■□□□□ 0.06
CLSTN3-202ENST00000331148 MRPL30Q8TCC3 161 aaKnown RBP15.44■□□□□ 0.06
CLSTN3-202ENST00000331148 RTTNQ86VV8 2226 aa15.44■□□□□ 0.06
CLSTN3-202ENST00000331148 PGLYRP1O75594 196 aaPredicted RBP15.43■□□□□ 0.06
CLSTN3-202ENST00000331148 LINC00614P0C842 121 aa15.43■□□□□ 0.06
CLSTN3-202ENST00000331148 IAPPP10997 89 aa15.43■□□□□ 0.06
CLSTN3-202ENST00000331148 CD59P13987 128 aa15.43■□□□□ 0.06
CLSTN3-202ENST00000331148 FUT6P51993 359 aa15.43■□□□□ 0.06
CLSTN3-202ENST00000331148 IZUMO4Q1ZYL8 232 aa15.43■□□□□ 0.06
CLSTN3-202ENST00000331148 AKIRIN1Q9H9L7 192 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms