RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 IGKV1-12A0A0C4DH73 117 aa17.68■□□□□ 0.42
CMTM4-201ENST00000330687 IGKV1D-12P01611 117 aa17.68■□□□□ 0.42
CMTM4-201ENST00000330687 SPINK9Q5DT21 86 aa17.68■□□□□ 0.42
CMTM4-201ENST00000330687 COA6Q5JTJ3 125 aaKnown RBP17.68■□□□□ 0.42
CMTM4-201ENST00000330687 TGIF2LYQ8IUE0 185 aa17.68■□□□□ 0.42
CMTM4-201ENST00000330687 DNASE2BQ8WZ79 361 aa17.68■□□□□ 0.42
CMTM4-201ENST00000330687 WNT10AQ9GZT5 417 aa17.68■□□□□ 0.42
CMTM4-201ENST00000330687 PNRC2Q9NPJ4 139 aaKnown RBP17.68■□□□□ 0.42
CMTM4-201ENST00000330687 TCFL5Q9UL49 500 aa17.68■□□□□ 0.42
CMTM4-201ENST00000330687 DUXBA0A1W2PPF3 345 aa17.67■□□□□ 0.42
CMTM4-201ENST00000330687 HNRNPA3P51991 378 aaKnown RBP17.67■□□□□ 0.42
CMTM4-201ENST00000330687 ID3Q02535 119 aa17.67■□□□□ 0.42
CMTM4-201ENST00000330687 CISD2Q8N5K1 135 aaKnown RBP17.67■□□□□ 0.42
CMTM4-201ENST00000330687 GJC3Q8NFK1 279 aa17.67■□□□□ 0.42
CMTM4-201ENST00000330687 ZFP30Q9Y2G7 519 aa17.67■□□□□ 0.42
CMTM4-201ENST00000330687 F2Z2F3 143 aa17.67■□□□□ 0.42
CMTM4-201ENST00000330687 ETV2O00321 342 aaPredicted RBP17.67■□□□□ 0.42
CMTM4-201ENST00000330687 CCL25O15444 150 aa17.67■□□□□ 0.42
CMTM4-201ENST00000330687 IL6RP08887 468 aaPredicted RBP17.67■□□□□ 0.42
CMTM4-201ENST00000330687 SAPCD1Q5SSQ6 148 aa17.67■□□□□ 0.42
CMTM4-201ENST00000330687 MRGPRX4Q96LA9 322 aa17.67■□□□□ 0.42
CMTM4-201ENST00000330687 RASL10BQ96S79 203 aa17.67■□□□□ 0.42
CMTM4-201ENST00000330687 TAAR3PQ9P1P4 343 aa17.67■□□□□ 0.42
CMTM4-201ENST00000330687 IGKV1D-33P01593 117 aa17.66■□□□□ 0.42
CMTM4-201ENST00000330687 IGKV1-33P01594 117 aa17.66■□□□□ 0.42
CMTM4-201ENST00000330687 C17orf67Q0P5P2 114 aa17.66■□□□□ 0.42
CMTM4-201ENST00000330687 FFAR4Q5NUL3 377 aa17.66■□□□□ 0.42
CMTM4-201ENST00000330687 C9orf50Q5SZB4 431 aa17.66■□□□□ 0.42
CMTM4-201ENST00000330687 OR5AU1Q8NGC0 362 aa17.66■□□□□ 0.42
CMTM4-201ENST00000330687 TECTBQ96PL2 329 aa17.66■□□□□ 0.42
CMTM4-201ENST00000330687 MRPL13Q9BYD1 178 aaKnown RBP17.66■□□□□ 0.42
CMTM4-201ENST00000330687 KIR2DS5A0A0G2JLQ3 304 aa17.66■□□□□ 0.42
CMTM4-201ENST00000330687 A0A0G2JNG1 304 aa17.66■□□□□ 0.42
CMTM4-201ENST00000330687 KIAA1324LA8MWY0 1029 aaPredicted RBP17.66■□□□□ 0.42
CMTM4-201ENST00000330687 G3V3Y1 287 aa17.66■□□□□ 0.42
CMTM4-201ENST00000330687 KIR2DS3K7RE56 304 aa17.66■□□□□ 0.42
CMTM4-201ENST00000330687 SIRPB1O00241 398 aa17.66■□□□□ 0.42
CMTM4-201ENST00000330687 IFI6P09912 130 aa17.66■□□□□ 0.42
CMTM4-201ENST00000330687 CRISP2P16562 243 aa17.66■□□□□ 0.42
CMTM4-201ENST00000330687 BLKP51451 505 aa17.66■□□□□ 0.42
CMTM4-201ENST00000330687 SLC35B1P78383 322 aa17.66■□□□□ 0.42
CMTM4-201ENST00000330687 KIR2DS5Q14953 304 aa17.66■□□□□ 0.42
CMTM4-201ENST00000330687 KIAA1644Q3SXP7 199 aa17.66■□□□□ 0.42
CMTM4-201ENST00000330687 ZNF552Q9H707 407 aaPredicted RBP17.66■□□□□ 0.42
CMTM4-201ENST00000330687 DECR2Q9NUI1 292 aa17.66■□□□□ 0.42
CMTM4-201ENST00000330687 SELENOKQ9Y6D0 94 aa17.66■□□□□ 0.42
CMTM4-201ENST00000330687 TNFSF13O75888 250 aa17.66■□□□□ 0.42
CMTM4-201ENST00000330687 NRASP01111 189 aa17.66■□□□□ 0.42
CMTM4-201ENST00000330687 NTF3P20783 257 aa17.66■□□□□ 0.42
CMTM4-201ENST00000330687 SUMO1P63165 101 aaKnown RBP17.66■□□□□ 0.42
CMTM4-201ENST00000330687 SLC22A18ASQ8N1D0 253 aa17.66■□□□□ 0.42
CMTM4-201ENST00000330687 OR1N1Q8NGS0 311 aa17.66■□□□□ 0.42
CMTM4-201ENST00000330687 PDCD6O75340 191 aa17.65■□□□□ 0.42
CMTM4-201ENST00000330687 HBG1P69891 147 aa17.65■□□□□ 0.42
CMTM4-201ENST00000330687 HBG2P69892 147 aa17.65■□□□□ 0.42
CMTM4-201ENST00000330687 OR4C5Q8NGB2 326 aa17.65■□□□□ 0.42
CMTM4-201ENST00000330687 ZNF837Q96EG3 531 aaPredicted RBP17.65■□□□□ 0.42
CMTM4-201ENST00000330687 P2RX4Q99571 388 aa17.65■□□□□ 0.42
CMTM4-201ENST00000330687 NDUFB4O95168 129 aa17.65■□□□□ 0.42
CMTM4-201ENST00000330687 MSR1P21757 451 aa17.65■□□□□ 0.42
CMTM4-201ENST00000330687 Q6ZRM9 215 aa17.65■□□□□ 0.42
CMTM4-201ENST00000330687 OR10G4Q8NGN3 311 aa17.65■□□□□ 0.42
CMTM4-201ENST00000330687 APH1AQ96BI3 265 aa17.65■□□□□ 0.42
CMTM4-201ENST00000330687 TRAF3IP2O43734 574 aaPredicted RBP17.65■□□□□ 0.42
CMTM4-201ENST00000330687 IGHEP01854 428 aa17.65■□□□□ 0.42
CMTM4-201ENST00000330687 ZNF90Q03938 601 aa17.65■□□□□ 0.42
CMTM4-201ENST00000330687 SPATA45Q537H7 98 aa17.65■□□□□ 0.42
CMTM4-201ENST00000330687 OR5L2Q8NGL0 311 aa17.65■□□□□ 0.42
CMTM4-201ENST00000330687 IL36RNQ9UBH0 155 aa17.65■□□□□ 0.42
CMTM4-201ENST00000330687 C11orf94C9JXX5 98 aa17.64■□□□□ 0.41
CMTM4-201ENST00000330687 SYNGR2O43760 224 aa17.64■□□□□ 0.41
CMTM4-201ENST00000330687 FBLP22087 321 aaKnown RBP17.64■□□□□ 0.41
CMTM4-201ENST00000330687 SIGLECL1Q8N7X8 197 aa17.64■□□□□ 0.41
CMTM4-201ENST00000330687 OR10G9Q8NGN4 311 aa17.64■□□□□ 0.41
CMTM4-201ENST00000330687 OR10G7Q8NGN6 311 aa17.64■□□□□ 0.41
CMTM4-201ENST00000330687 STARD4Q96DR4 205 aa17.64■□□□□ 0.41
CMTM4-201ENST00000330687 GPR35Q9HC97 309 aa17.64■□□□□ 0.41
CMTM4-201ENST00000330687 CHD9Q3L8U1 2897 aa17.64■□□□□ 0.41
CMTM4-201ENST00000330687 DOCK7Q96N67 2140 aa17.64■□□□□ 0.41
CMTM4-201ENST00000330687 DIRC3C9JPN6 131 aa17.64■□□□□ 0.41
CMTM4-201ENST00000330687 M0QZ24 198 aa17.64■□□□□ 0.41
CMTM4-201ENST00000330687 HS3ST1O14792 307 aa17.64■□□□□ 0.41
CMTM4-201ENST00000330687 CA3P07451 260 aa17.64■□□□□ 0.41
CMTM4-201ENST00000330687 MSMO1Q15800 293 aa17.64■□□□□ 0.41
CMTM4-201ENST00000330687 VAMP3Q15836 100 aa17.64■□□□□ 0.41
CMTM4-201ENST00000330687 Q6ZPA2 131 aa17.64■□□□□ 0.41
CMTM4-201ENST00000330687 RDH5Q92781 318 aa17.64■□□□□ 0.41
CMTM4-201ENST00000330687 TM4SF4P48230 202 aa17.63■□□□□ 0.41
CMTM4-201ENST00000330687 ZP4Q12836 540 aa17.63■□□□□ 0.41
CMTM4-201ENST00000330687 PSMF1Q92530 271 aa17.63■□□□□ 0.41
CMTM4-201ENST00000330687 SPTSSAQ969W0 71 aa17.63■□□□□ 0.41
CMTM4-201ENST00000330687 TWSG1Q9GZX9 223 aa17.63■□□□□ 0.41
CMTM4-201ENST00000330687 REV3LO60673 3130 aa17.63■□□□□ 0.41
CMTM4-201ENST00000330687 SH2D1BO14796 132 aa17.63■□□□□ 0.41
CMTM4-201ENST00000330687 WDR1O75083 606 aa17.63■□□□□ 0.41
CMTM4-201ENST00000330687 KITLGP21583 273 aa17.63■□□□□ 0.41
CMTM4-201ENST00000330687 S100GP29377 79 aa17.63■□□□□ 0.41
CMTM4-201ENST00000330687 SLC38A11Q08AI6 406 aa17.63■□□□□ 0.41
CMTM4-201ENST00000330687 SYT13Q7L8C5 426 aa17.63■□□□□ 0.41
CMTM4-201ENST00000330687 ZNF525Q8N782 197 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms