RNA–Protein interactions for RNA: ENST00000329629.8

FNDC1-202, Transcript of fibronectin type III domain containing 1, humanhuman

TSL 1 (best)

Gene FNDC1, Length 6,034 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-202ENST00000329629 PTP4A1Q93096 173 aa12.33□□□□□ -0.44
FNDC1-202ENST00000329629 WDR34Q96EX3 536 aa12.33□□□□□ -0.44
FNDC1-202ENST00000329629 MIEN1Q9BRT3 115 aa12.33□□□□□ -0.44
FNDC1-202ENST00000329629 COL4A5P29400 1685 aa12.33□□□□□ -0.44
FNDC1-202ENST00000329629 MFAP2P55001 183 aa12.33□□□□□ -0.44
FNDC1-202ENST00000329629 ECSCRQ19T08 205 aa12.33□□□□□ -0.44
FNDC1-202ENST00000329629 REG1BP48304 166 aa12.32□□□□□ -0.44
FNDC1-202ENST00000329629 ATG4DQ86TL0 474 aaPredicted RBP12.32□□□□□ -0.44
FNDC1-202ENST00000329629 HIGD1AQ9Y241 93 aa12.32□□□□□ -0.44
FNDC1-202ENST00000329629 LIPT2A6NK58 231 aa12.32□□□□□ -0.44
FNDC1-202ENST00000329629 VSIG8P0DPA2 414 aa12.32□□□□□ -0.44
FNDC1-202ENST00000329629 IL36RNQ9UBH0 155 aa12.32□□□□□ -0.44
FNDC1-202ENST00000329629 CES1P1Q9UKY3 287 aa12.32□□□□□ -0.44
FNDC1-202ENST00000329629 RPL36A-HNRNPH2H7BZ11 118 aa12.32□□□□□ -0.44
FNDC1-202ENST00000329629 ZNF345Q14585 488 aa12.32□□□□□ -0.44
FNDC1-202ENST00000329629 RHBDD2Q6NTF9 364 aa12.32□□□□□ -0.44
FNDC1-202ENST00000329629 VN1R4Q7Z5H5 301 aa12.32□□□□□ -0.44
FNDC1-202ENST00000329629 ADAMTS17Q8TE56 1095 aa12.32□□□□□ -0.44
FNDC1-202ENST00000329629 RND1Q92730 232 aa12.32□□□□□ -0.44
FNDC1-202ENST00000329629 LY75O60449 1722 aa12.32□□□□□ -0.44
FNDC1-202ENST00000329629 SHANK3Q9BYB0 1731 aa12.32□□□□□ -0.44
FNDC1-202ENST00000329629 A0A1W2PPC1 479 aa12.32□□□□□ -0.44
FNDC1-202ENST00000329629 CYB5R3P00387 301 aaPredicted RBP12.32□□□□□ -0.44
FNDC1-202ENST00000329629 SOX8P57073 446 aa12.32□□□□□ -0.44
FNDC1-202ENST00000329629 DCAF12L2Q5VW00 463 aa12.32□□□□□ -0.44
FNDC1-202ENST00000329629 OR5AC2Q9NZP5 309 aa12.32□□□□□ -0.44
FNDC1-202ENST00000329629 TCFL5Q9UL49 500 aa12.32□□□□□ -0.44
FNDC1-202ENST00000329629 PLXNB2O15031 1838 aa12.32□□□□□ -0.44
FNDC1-202ENST00000329629 TGIF2-C20orf24A0A0A6YYL0 155 aa12.32□□□□□ -0.44
FNDC1-202ENST00000329629 BCL2P10415 239 aa12.32□□□□□ -0.44
FNDC1-202ENST00000329629 CCL4P13236 92 aa12.32□□□□□ -0.44
FNDC1-202ENST00000329629 KLK2P20151 261 aa12.32□□□□□ -0.44
FNDC1-202ENST00000329629 WNT2BQ93097 391 aa12.32□□□□□ -0.44
FNDC1-202ENST00000329629 MS4A3Q96HJ5 214 aa12.32□□□□□ -0.44
FNDC1-202ENST00000329629 OR2H1Q9GZK4 316 aa12.32□□□□□ -0.44
FNDC1-202ENST00000329629 EMP1P54849 157 aa12.31□□□□□ -0.44
FNDC1-202ENST00000329629 RNF122Q9H9V4 155 aa12.31□□□□□ -0.44
FNDC1-202ENST00000329629 INSIG2Q9Y5U4 225 aa12.31□□□□□ -0.44
FNDC1-202ENST00000329629 TMEM189A5PLL7 270 aa12.31□□□□□ -0.44
FNDC1-202ENST00000329629 CXorf65A6NEN9 183 aa12.31□□□□□ -0.44
FNDC1-202ENST00000329629 SYNGR1O43759 233 aa12.31□□□□□ -0.44
FNDC1-202ENST00000329629 ZIC1Q15915 447 aa12.31□□□□□ -0.44
FNDC1-202ENST00000329629 RAB1CQ92928 201 aa12.31□□□□□ -0.44
FNDC1-202ENST00000329629 PCGF1Q9BSM1 259 aa12.31□□□□□ -0.44
FNDC1-202ENST00000329629 SCN4AP35499 1836 aa12.31□□□□□ -0.44
FNDC1-202ENST00000329629 PRR7Q8TB68 274 aa12.31□□□□□ -0.44
FNDC1-202ENST00000329629 NRIP2Q9BQI9 281 aa12.31□□□□□ -0.44
FNDC1-202ENST00000329629 ELF5Q9UKW6 265 aaPredicted RBP12.31□□□□□ -0.44
FNDC1-202ENST00000329629 HIKESHIQ53FT3 197 aa12.31□□□□□ -0.44
FNDC1-202ENST00000329629 TMEM91Q6ZNR0 172 aa12.31□□□□□ -0.44
FNDC1-202ENST00000329629 TRBV23-1A0A0A0MS06 115 aa12.31□□□□□ -0.44
FNDC1-202ENST00000329629 C21orf140B9A014 251 aa12.31□□□□□ -0.44
FNDC1-202ENST00000329629 KBTBD11O94819 623 aa12.31□□□□□ -0.44
FNDC1-202ENST00000329629 NDUFB4O95168 129 aa12.31□□□□□ -0.44
FNDC1-202ENST00000329629 CDS2O95674 445 aa12.31□□□□□ -0.44
FNDC1-202ENST00000329629 VSIG10L2P0DP72 767 aa12.31□□□□□ -0.44
FNDC1-202ENST00000329629 MMP16P51512 607 aa12.31□□□□□ -0.44
FNDC1-202ENST00000329629 FAM60AQ9NP50 221 aa12.31□□□□□ -0.44
FNDC1-202ENST00000329629 TMEM238LA0A1B0GVL6 79 aa12.3□□□□□ -0.44
FNDC1-202ENST00000329629 A6NJY4 79 aa12.3□□□□□ -0.44
FNDC1-202ENST00000329629 J3QR06 171 aa12.3□□□□□ -0.44
FNDC1-202ENST00000329629 MAGEA5P43359 124 aa12.3□□□□□ -0.44
FNDC1-202ENST00000329629 ZNF665Q9H7R5 613 aa12.3□□□□□ -0.44
FNDC1-202ENST00000329629 PPP1CCP36873 323 aaKnown RBP12.3□□□□□ -0.44
FNDC1-202ENST00000329629 STPG1Q5TH74 334 aa12.3□□□□□ -0.44
FNDC1-202ENST00000329629 PGLYRP3Q96LB9 341 aa12.3□□□□□ -0.44
FNDC1-202ENST00000329629 ZNF107Q9UII5 783 aaPredicted RBP12.3□□□□□ -0.44
FNDC1-202ENST00000329629 IGHV5-10-1A0A0J9YXX1 117 aa12.3□□□□□ -0.44
FNDC1-202ENST00000329629 OR4C45A6NMZ5 311 aa12.3□□□□□ -0.44
FNDC1-202ENST00000329629 HRKO00198 91 aa12.3□□□□□ -0.44
FNDC1-202ENST00000329629 LSM6P62312 80 aaKnown RBP12.3□□□□□ -0.44
FNDC1-202ENST00000329629 OR2Y1Q8NGV0 311 aa12.3□□□□□ -0.44
FNDC1-202ENST00000329629 OR1P1Q8NH06 330 aa12.3□□□□□ -0.44
FNDC1-202ENST00000329629 C10orf35Q96D05 121 aa12.3□□□□□ -0.44
FNDC1-202ENST00000329629 OR2V2Q96R30 315 aa12.3□□□□□ -0.44
FNDC1-202ENST00000329629 PLAC1Q9HBJ0 212 aa12.3□□□□□ -0.44
FNDC1-202ENST00000329629 RNF7Q9UBF6 113 aa12.3□□□□□ -0.44
FNDC1-202ENST00000329629 IL19Q9UHD0 177 aa12.3□□□□□ -0.44
FNDC1-202ENST00000329629 F11RQ9Y624 299 aaKnown RBP12.3□□□□□ -0.44
FNDC1-202ENST00000329629 HBZP02008 142 aa12.3□□□□□ -0.44
FNDC1-202ENST00000329629 CD3EP07766 207 aa12.3□□□□□ -0.44
FNDC1-202ENST00000329629 SOD3P08294 240 aa12.3□□□□□ -0.44
FNDC1-202ENST00000329629 GFRA1P56159 465 aa12.3□□□□□ -0.44
FNDC1-202ENST00000329629 RAC3P60763 192 aa12.3□□□□□ -0.44
FNDC1-202ENST00000329629 UBTD1Q9HAC8 227 aa12.3□□□□□ -0.44
FNDC1-202ENST00000329629 SAP30LQ9HAJ7 183 aa12.3□□□□□ -0.44
FNDC1-202ENST00000329629 PRSS8Q16651 343 aa12.3□□□□□ -0.44
FNDC1-202ENST00000329629 C1QTNF12Q5T7M4 302 aa12.3□□□□□ -0.44
FNDC1-202ENST00000329629 CALHM1Q8IU99 346 aa12.3□□□□□ -0.44
FNDC1-202ENST00000329629 H1FOOQ8IZA3 346 aaPredicted RBP12.3□□□□□ -0.44
FNDC1-202ENST00000329629 DYNLRB2Q8TF09 96 aa12.3□□□□□ -0.44
FNDC1-202ENST00000329629 ZNF488Q96MN9 340 aa12.3□□□□□ -0.44
FNDC1-202ENST00000329629 HIST1H4GQ99525 98 aa12.3□□□□□ -0.44
FNDC1-202ENST00000329629 MRPS18BQ9Y676 258 aaKnown RBP12.3□□□□□ -0.44
FNDC1-202ENST00000329629 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.29□□□□□ -0.44
FNDC1-202ENST00000329629 COL10A1Q03692 680 aa12.29□□□□□ -0.44
FNDC1-202ENST00000329629 PMS2CLQ68D20 193 aa12.29□□□□□ -0.44
FNDC1-202ENST00000329629 EID2BQ96D98 161 aa12.29□□□□□ -0.44
FNDC1-202ENST00000329629 PXMP4Q9Y6I8 212 aa12.29□□□□□ -0.44
FNDC1-202ENST00000329629 WDR25Q64LD2 544 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms