RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 OR2AK2Q8NG84 335 aa13.65□□□□□ -0.22
PDLIM1-201ENST00000329399 DYRK2Q92630 601 aa13.65□□□□□ -0.22
PDLIM1-201ENST00000329399 HYLS1Q96M11 299 aa13.65□□□□□ -0.22
PDLIM1-201ENST00000329399 FAM234AQ9H0X4 552 aa13.65□□□□□ -0.22
PDLIM1-201ENST00000329399 ZNF222Q9UK12 451 aa13.65□□□□□ -0.22
PDLIM1-201ENST00000329399 TRAPPC2LQ9UL33 140 aa13.65□□□□□ -0.22
PDLIM1-201ENST00000329399 OOEPA6NGQ2 149 aa13.64□□□□□ -0.23
PDLIM1-201ENST00000329399 OR5H14A6NHG9 310 aa13.64□□□□□ -0.23
PDLIM1-201ENST00000329399 A8MV72 311 aaPredicted RBP13.64□□□□□ -0.23
PDLIM1-201ENST00000329399 MGST3O14880 152 aa13.64□□□□□ -0.23
PDLIM1-201ENST00000329399 OR2A4O95047 310 aa13.64□□□□□ -0.23
PDLIM1-201ENST00000329399 FSTL3O95633 263 aa13.64□□□□□ -0.23
PDLIM1-201ENST00000329399 TGFAP01135 160 aa13.64□□□□□ -0.23
PDLIM1-201ENST00000329399 ZNF728P0DKX0 622 aa13.64□□□□□ -0.23
PDLIM1-201ENST00000329399 PSG2P11465 335 aa13.64□□□□□ -0.23
PDLIM1-201ENST00000329399 FCGR2CP31995 323 aa13.64□□□□□ -0.23
PDLIM1-201ENST00000329399 FAM201AQ5SY85 155 aa13.64□□□□□ -0.23
PDLIM1-201ENST00000329399 TEX36Q5VZQ5 186 aa13.64□□□□□ -0.23
PDLIM1-201ENST00000329399 NOXA1Q86UR1 476 aa13.64□□□□□ -0.23
PDLIM1-201ENST00000329399 PRIMA1Q86XR5 153 aa13.64□□□□□ -0.23
PDLIM1-201ENST00000329399 CCDC71LQ8N9Z2 235 aa13.64□□□□□ -0.23
PDLIM1-201ENST00000329399 DRAXINQ8NBI3 349 aaPredicted RBP13.64□□□□□ -0.23
PDLIM1-201ENST00000329399 OR11H7Q8NGC8 314 aa13.64□□□□□ -0.23
PDLIM1-201ENST00000329399 C1orf159Q96HA4 380 aa13.64□□□□□ -0.23
PDLIM1-201ENST00000329399 OR2A7Q96R45 310 aa13.64□□□□□ -0.23
PDLIM1-201ENST00000329399 C5orf66Q9H5L9 145 aa13.64□□□□□ -0.23
PDLIM1-201ENST00000329399 TMEM106BQ9NUM4 274 aa13.64□□□□□ -0.23
PDLIM1-201ENST00000329399 KCNIP3Q9Y2W7 256 aa13.64□□□□□ -0.23
PDLIM1-201ENST00000329399 TANC2Q9HCD6 1990 aa13.63□□□□□ -0.23
PDLIM1-201ENST00000329399 TRBV6-7A0A0A0MS04 114 aa13.63□□□□□ -0.23
PDLIM1-201ENST00000329399 TUSC2O75896 110 aa13.63□□□□□ -0.23
PDLIM1-201ENST00000329399 SFT2D2O95562 160 aa13.63□□□□□ -0.23
PDLIM1-201ENST00000329399 GZMHP20718 246 aa13.63□□□□□ -0.23
PDLIM1-201ENST00000329399 CD34P28906 385 aa13.63□□□□□ -0.23
PDLIM1-201ENST00000329399 S100GP29377 79 aa13.63□□□□□ -0.23
PDLIM1-201ENST00000329399 GZMKP49863 264 aa13.63□□□□□ -0.23
PDLIM1-201ENST00000329399 COL10A1Q03692 680 aa13.63□□□□□ -0.23
PDLIM1-201ENST00000329399 OR10J5Q8NHC4 309 aa13.63□□□□□ -0.23
PDLIM1-201ENST00000329399 COQ8AQ8NI60 647 aa13.63□□□□□ -0.23
PDLIM1-201ENST00000329399 SDSLQ96GA7 329 aa13.63□□□□□ -0.23
PDLIM1-201ENST00000329399 RTBDNQ9BSG5 229 aaPredicted RBP13.63□□□□□ -0.23
PDLIM1-201ENST00000329399 LPAR2Q9HBW0 351 aa13.63□□□□□ -0.23
PDLIM1-201ENST00000329399 MGAT4CQ9UBM8 478 aa13.63□□□□□ -0.23
PDLIM1-201ENST00000329399 TRAV38-1A0A0B4J264 116 aa13.62□□□□□ -0.23
PDLIM1-201ENST00000329399 FAM172BPA6NC97 362 aa13.62□□□□□ -0.23
PDLIM1-201ENST00000329399 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.62□□□□□ -0.23
PDLIM1-201ENST00000329399 HSPB6O14558 160 aa13.62□□□□□ -0.23
PDLIM1-201ENST00000329399 CRLF1O75462 422 aa13.62□□□□□ -0.23
PDLIM1-201ENST00000329399 B3GALNT1O75752 331 aa13.62□□□□□ -0.23
PDLIM1-201ENST00000329399 SLC22A5O76082 557 aa13.62□□□□□ -0.23
PDLIM1-201ENST00000329399 CYB5R3P00387 301 aaPredicted RBP13.62□□□□□ -0.23
PDLIM1-201ENST00000329399 PPYP01298 95 aa13.62□□□□□ -0.23
PDLIM1-201ENST00000329399 AKR1C4P17516 323 aa13.62□□□□□ -0.23
PDLIM1-201ENST00000329399 CD300CQ08708 224 aa13.62□□□□□ -0.23
PDLIM1-201ENST00000329399 PPP1R1AQ13522 171 aa13.62□□□□□ -0.23
PDLIM1-201ENST00000329399 HMGN3Q15651 99 aa13.62□□□□□ -0.23
PDLIM1-201ENST00000329399 ABCA11PQ4W5N1 156 aa13.62□□□□□ -0.23
PDLIM1-201ENST00000329399 IL17RELQ6ZVW7 336 aa13.62□□□□□ -0.23
PDLIM1-201ENST00000329399 SGPP2Q8IWX5 399 aa13.62□□□□□ -0.23
PDLIM1-201ENST00000329399 ANGPTL6Q8NI99 470 aa13.62□□□□□ -0.23
PDLIM1-201ENST00000329399 PLPPR1Q8TBJ4 325 aa13.62□□□□□ -0.23
PDLIM1-201ENST00000329399 CAPSLQ8WWF8 208 aa13.62□□□□□ -0.23
PDLIM1-201ENST00000329399 KIRREL1Q96J84 757 aa13.62□□□□□ -0.23
PDLIM1-201ENST00000329399 FYTTD1Q96QD9 318 aaKnown RBP13.62□□□□□ -0.23
PDLIM1-201ENST00000329399 RSRP1Q9BUV0 290 aa13.62□□□□□ -0.23
PDLIM1-201ENST00000329399 COL6A5A8TX70 2615 aa13.62□□□□□ -0.23
PDLIM1-201ENST00000329399 C3orf80F5H4A9 247 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 TMEM178BH3BS89 294 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 K7N7A8 449 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 NDUFA2O43678 99 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 PSPNO60542 156 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 ZNF737O75373 536 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 IGHV2-70P01814 119 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 OR3A1P47881 315 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 RND3P61587 244 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 CYCSP99999 105 aaKnown RBP13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 SRSF4Q08170 494 aaKnown RBP13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 CR1LQ2VPA4 569 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 Q6ZPA2 131 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 C17orf107Q6ZR85 190 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 KCTD9Q7L273 389 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 GALNT14Q96FL9 552 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 TOLLIPQ9H0E2 274 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 ZNF665Q9H7R5 613 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 IGKV1D-17A0A075B6S4 117 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 LGALS8O00214 317 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 SCTP09683 121 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 CXCL3P19876 107 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 VAMP1P23763 118 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 GMFBP60983 142 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 FGL1Q08830 312 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 MSMO1Q15800 293 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 TMEM30BQ3MIR4 351 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 IGSF11Q5DX21 431 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 KRBOX4Q5JUW0 171 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 STUMQ69YW2 141 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 CD177Q8N6Q3 437 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 ZNF565Q8N9K5 539 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 LINC01356Q8N9X3 169 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 OR5T2Q8NGG2 359 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms