RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 FBP1P09467 338 aa13.35□□□□□ -0.27
GCFC2-201ENST00000321027 G0S2P27469 103 aa13.35□□□□□ -0.27
GCFC2-201ENST00000321027 RPL29P47914 159 aaKnown RBP13.35□□□□□ -0.27
GCFC2-201ENST00000321027 VMA21Q3ZAQ7 101 aa13.35□□□□□ -0.27
GCFC2-201ENST00000321027 CXorf66Q5JRM2 361 aaPredicted RBP13.35□□□□□ -0.27
GCFC2-201ENST00000321027 LY6G6FQ5SQ64 297 aa13.35□□□□□ -0.27
GCFC2-201ENST00000321027 ACTL6AO96019 429 aa13.35□□□□□ -0.27
GCFC2-201ENST00000321027 TMEM50BP56557 158 aa13.35□□□□□ -0.27
GCFC2-201ENST00000321027 ERVS71-1P61550 626 aa13.35□□□□□ -0.27
GCFC2-201ENST00000321027 VPS25Q9BRG1 176 aa13.35□□□□□ -0.27
GCFC2-201ENST00000321027 CACFD1Q9UGQ2 172 aa13.35□□□□□ -0.27
GCFC2-201ENST00000321027 TIMM9Q9Y5J7 89 aa13.35□□□□□ -0.27
GCFC2-201ENST00000321027 PKDREJQ9NTG1 2253 aa13.35□□□□□ -0.27
GCFC2-201ENST00000321027 HNRNPA3P51991 378 aaKnown RBP13.35□□□□□ -0.27
GCFC2-201ENST00000321027 LRRC10Q5BKY1 277 aa13.35□□□□□ -0.27
GCFC2-201ENST00000321027 DHRS11Q6UWP2 260 aa13.35□□□□□ -0.27
GCFC2-201ENST00000321027 NUFIP2Q7Z417 695 aaKnown RBP13.35□□□□□ -0.27
GCFC2-201ENST00000321027 GBF1Q92538 1859 aa13.34□□□□□ -0.27
GCFC2-201ENST00000321027 XKRY2A2RUG3 117 aa13.34□□□□□ -0.27
GCFC2-201ENST00000321027 EIF3GO75821 320 aaKnown RBP eCLIP13.34□□□□□ -0.27
GCFC2-201ENST00000321027 RBP4P02753 201 aa13.34□□□□□ -0.27
GCFC2-201ENST00000321027 PRF1P14222 555 aa13.34□□□□□ -0.27
GCFC2-201ENST00000321027 MDKP21741 143 aaPredicted RBP13.34□□□□□ -0.27
GCFC2-201ENST00000321027 RBM11P57052 281 aaKnown RBP13.34□□□□□ -0.27
GCFC2-201ENST00000321027 TPPP2P59282 170 aa13.34□□□□□ -0.27
GCFC2-201ENST00000321027 PMS2P11Q13670 270 aa13.34□□□□□ -0.27
GCFC2-201ENST00000321027 COL19A1Q14993 1142 aa13.34□□□□□ -0.27
GCFC2-201ENST00000321027 TMEM252Q8N6L7 170 aa13.34□□□□□ -0.27
GCFC2-201ENST00000321027 ADAMTS17Q8TE56 1095 aa13.34□□□□□ -0.27
GCFC2-201ENST00000321027 TMEM56Q96MV1 263 aa13.34□□□□□ -0.27
GCFC2-201ENST00000321027 HEATR5AQ86XA9 2040 aa13.34□□□□□ -0.27
GCFC2-201ENST00000321027 IGKV3D-11A0A0A0MRZ8 115 aa13.34□□□□□ -0.27
GCFC2-201ENST00000321027 IGHV1-45A0A0A0MS14 117 aa13.34□□□□□ -0.27
GCFC2-201ENST00000321027 FCN1O00602 326 aa13.34□□□□□ -0.27
GCFC2-201ENST00000321027 GDF9O60383 454 aa13.34□□□□□ -0.27
GCFC2-201ENST00000321027 SCTP09683 121 aa13.34□□□□□ -0.27
GCFC2-201ENST00000321027 BSXQ3C1V8 233 aa13.34□□□□□ -0.27
GCFC2-201ENST00000321027 OR1L4Q8NGR5 311 aa13.34□□□□□ -0.27
GCFC2-201ENST00000321027 MISP3Q96FF7 219 aa13.34□□□□□ -0.27
GCFC2-201ENST00000321027 MS4A10Q96PG2 267 aa13.34□□□□□ -0.27
GCFC2-201ENST00000321027 ATP5SQ99766 215 aa13.34□□□□□ -0.27
GCFC2-201ENST00000321027 MPC1Q9Y5U8 109 aa13.34□□□□□ -0.27
GCFC2-201ENST00000321027 GAPDHP04406 335 aaKnown RBP13.34□□□□□ -0.27
GCFC2-201ENST00000321027 CYC1P08574 325 aa13.34□□□□□ -0.27
GCFC2-201ENST00000321027 TGIF1Q15583 401 aa13.34□□□□□ -0.27
GCFC2-201ENST00000321027 FAM78BQ5VT40 261 aa13.34□□□□□ -0.27
GCFC2-201ENST00000321027 VAMP8Q9BV40 100 aa13.34□□□□□ -0.27
GCFC2-201ENST00000321027 NCBP2LA6PVI3 153 aaKnown RBP13.33□□□□□ -0.27
GCFC2-201ENST00000321027 PPP1CCP36873 323 aaKnown RBP13.33□□□□□ -0.27
GCFC2-201ENST00000321027 CAMPP49913 170 aa13.33□□□□□ -0.27
GCFC2-201ENST00000321027 FOXC1Q12948 553 aa13.33□□□□□ -0.27
GCFC2-201ENST00000321027 CYB561D1Q8N8Q1 229 aa13.33□□□□□ -0.27
GCFC2-201ENST00000321027 OR52M1Q8NGK5 317 aa13.33□□□□□ -0.27
GCFC2-201ENST00000321027 SNX22Q96L94 193 aa13.33□□□□□ -0.27
GCFC2-201ENST00000321027 TIMP4Q99727 224 aa13.33□□□□□ -0.27
GCFC2-201ENST00000321027 E9PQ18 207 aa13.33□□□□□ -0.28
GCFC2-201ENST00000321027 PSG2P11465 335 aa13.33□□□□□ -0.28
GCFC2-201ENST00000321027 ZNF708P17019 499 aa13.33□□□□□ -0.28
GCFC2-201ENST00000321027 SOX8P57073 446 aa13.33□□□□□ -0.28
GCFC2-201ENST00000321027 HIKESHIQ53FT3 197 aa13.33□□□□□ -0.28
GCFC2-201ENST00000321027 FGF11Q92914 225 aa13.33□□□□□ -0.28
GCFC2-201ENST00000321027 IL22RA2Q969J5 263 aa13.33□□□□□ -0.28
GCFC2-201ENST00000321027 NEIL1Q96FI4 390 aaPredicted RBP13.33□□□□□ -0.28
GCFC2-201ENST00000321027 CHRDL1Q9BU40 450 aa13.33□□□□□ -0.28
GCFC2-201ENST00000321027 PARD6AQ9NPB6 346 aa13.33□□□□□ -0.28
GCFC2-201ENST00000321027 TREM2Q9NZC2 230 aa13.33□□□□□ -0.28
GCFC2-201ENST00000321027 ZNF880Q6PDB4 577 aa13.33□□□□□ -0.28
GCFC2-201ENST00000321027 KLHDC1Q8N7A1 406 aa13.33□□□□□ -0.28
GCFC2-201ENST00000321027 LINC00518Q8N0U6 118 aa13.33□□□□□ -0.28
GCFC2-201ENST00000321027 BLNKQ8WV28 456 aa13.33□□□□□ -0.28
GCFC2-201ENST00000321027 NOL4LQ96MY1 436 aaPredicted RBP13.33□□□□□ -0.28
GCFC2-201ENST00000321027 SH3BGRL3Q9H299 93 aa13.33□□□□□ -0.28
GCFC2-201ENST00000321027 KLK2P20151 261 aa13.32□□□□□ -0.28
GCFC2-201ENST00000321027 OR2M7Q8NG81 312 aa13.32□□□□□ -0.28
GCFC2-201ENST00000321027 BCL2L2Q92843 193 aaPredicted RBP13.32□□□□□ -0.28
GCFC2-201ENST00000321027 OR2J3O76001 311 aa13.32□□□□□ -0.28
GCFC2-201ENST00000321027 HLA-GP17693 338 aa13.32□□□□□ -0.28
GCFC2-201ENST00000321027 FNDC7Q5VTL7 733 aa13.32□□□□□ -0.28
GCFC2-201ENST00000321027 SSMEM1Q8WWF3 244 aa13.32□□□□□ -0.28
GCFC2-201ENST00000321027 TMEM147Q9BVK8 224 aa13.32□□□□□ -0.28
GCFC2-201ENST00000321027 RPL36A-HNRNPH2H7BZ11 118 aa13.32□□□□□ -0.28
GCFC2-201ENST00000321027 COX7A1P24310 79 aa13.32□□□□□ -0.28
GCFC2-201ENST00000321027 TCL1AP56279 114 aa13.32□□□□□ -0.28
GCFC2-201ENST00000321027 SPNS3Q6ZMD2 512 aa13.32□□□□□ -0.28
GCFC2-201ENST00000321027 MYPOPQ86VE0 399 aaPredicted RBP13.32□□□□□ -0.28
GCFC2-201ENST00000321027 LY86O95711 162 aa13.31□□□□□ -0.28
GCFC2-201ENST00000321027 CRYABP02511 175 aaKnown RBP13.31□□□□□ -0.28
GCFC2-201ENST00000321027 SLC25A5P05141 298 aaKnown RBP13.31□□□□□ -0.28
GCFC2-201ENST00000321027 GNG4P50150 75 aa13.31□□□□□ -0.28
GCFC2-201ENST00000321027 RHOBP62745 196 aa13.31□□□□□ -0.28
GCFC2-201ENST00000321027 TNFAIP6P98066 277 aaPredicted RBP13.31□□□□□ -0.28
GCFC2-201ENST00000321027 IQCJQ1A5X6 159 aa13.31□□□□□ -0.28
GCFC2-201ENST00000321027 IZUMO4Q1ZYL8 232 aa13.31□□□□□ -0.28
GCFC2-201ENST00000321027 RNASEKQ6P5S7 137 aaKnown RBP13.31□□□□□ -0.28
GCFC2-201ENST00000321027 RSG1Q9BU20 258 aa13.31□□□□□ -0.28
GCFC2-201ENST00000321027 AURKAIP1Q9NWT8 199 aaPredicted RBP13.31□□□□□ -0.28
GCFC2-201ENST00000321027 OR2W1Q9Y3N9 320 aa13.31□□□□□ -0.28
GCFC2-201ENST00000321027 PCNTO95613 3336 aa13.31□□□□□ -0.28
GCFC2-201ENST00000321027 SCN8AQ9UQD0 1980 aa13.31□□□□□ -0.28
GCFC2-201ENST00000321027 ST8SIA5O15466 376 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms