RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 SP6Q3SY56 376 aa14.87□□□□□ -0.03
RAB39A-201ENST00000320578 TMUB2Q71RG4 321 aa14.87□□□□□ -0.03
RAB39A-201ENST00000320578 NEUROG1Q92886 237 aa14.87□□□□□ -0.03
RAB39A-201ENST00000320578 TMEM178BH3BS89 294 aa14.87□□□□□ -0.03
RAB39A-201ENST00000320578 HSD17B6O14756 317 aa14.87□□□□□ -0.03
RAB39A-201ENST00000320578 SIGLEC5O15389 551 aa14.87□□□□□ -0.03
RAB39A-201ENST00000320578 F2RP25116 425 aa14.87□□□□□ -0.03
RAB39A-201ENST00000320578 SSTR2P30874 369 aa14.87□□□□□ -0.03
RAB39A-201ENST00000320578 IAH1Q2TAA2 248 aaPredicted RBP14.87□□□□□ -0.03
RAB39A-201ENST00000320578 TEX261Q6UWH6 196 aa14.87□□□□□ -0.03
RAB39A-201ENST00000320578 ACOT7LQ6ZUV0 252 aa14.87□□□□□ -0.03
RAB39A-201ENST00000320578 PRR18Q8N4B5 295 aa14.87□□□□□ -0.03
RAB39A-201ENST00000320578 NINJ1Q92982 152 aa14.87□□□□□ -0.03
RAB39A-201ENST00000320578 ARL11Q969Q4 196 aa14.87□□□□□ -0.03
RAB39A-201ENST00000320578 C14orf79Q96F83 325 aa14.87□□□□□ -0.03
RAB39A-201ENST00000320578 GAFA1Q96PS6 74 aa14.87□□□□□ -0.03
RAB39A-201ENST00000320578 ZFP57Q9NU63 452 aa14.87□□□□□ -0.03
RAB39A-201ENST00000320578 UBE2J1Q9Y385 318 aaPredicted RBP14.87□□□□□ -0.03
RAB39A-201ENST00000320578 U3KQ87 197 aa14.87□□□□□ -0.03
RAB39A-201ENST00000320578 MPTX1A8MV57 137 aa14.86□□□□□ -0.03
RAB39A-201ENST00000320578 CLDN14O95500 239 aa14.86□□□□□ -0.03
RAB39A-201ENST00000320578 IGLV2-14P01704 120 aa14.86□□□□□ -0.03
RAB39A-201ENST00000320578 CGB3P0DN86 165 aa14.86□□□□□ -0.03
RAB39A-201ENST00000320578 CGB7P0DN87 165 aa14.86□□□□□ -0.03
RAB39A-201ENST00000320578 FAM201AQ5SY85 155 aa14.86□□□□□ -0.03
RAB39A-201ENST00000320578 PRSS54Q6PEW0 395 aa14.86□□□□□ -0.03
RAB39A-201ENST00000320578 KCNRGQ8N5I3 272 aa14.86□□□□□ -0.03
RAB39A-201ENST00000320578 ZNRF1Q8ND25 227 aa14.86□□□□□ -0.03
RAB39A-201ENST00000320578 RNF126Q9BV68 326 aa14.86□□□□□ -0.03
RAB39A-201ENST00000320578 TMEM106BQ9NUM4 274 aa14.86□□□□□ -0.03
RAB39A-201ENST00000320578 F2RL2O00254 374 aa14.85□□□□□ -0.03
RAB39A-201ENST00000320578 FSTL3O95633 263 aa14.85□□□□□ -0.03
RAB39A-201ENST00000320578 PLAUP00749 431 aa14.85□□□□□ -0.03
RAB39A-201ENST00000320578 SNTB1Q13884 538 aaKnown RBP14.85□□□□□ -0.03
RAB39A-201ENST00000320578 JPT1Q9UK76 154 aa14.85□□□□□ -0.03
RAB39A-201ENST00000320578 PPIAL4EA0A075B759 164 aa14.85□□□□□ -0.03
RAB39A-201ENST00000320578 NKX6-3A6NJ46 265 aa14.85□□□□□ -0.03
RAB39A-201ENST00000320578 PPIAL4DF5H284 164 aa14.85□□□□□ -0.03
RAB39A-201ENST00000320578 TSC22D2O75157 780 aa14.85□□□□□ -0.03
RAB39A-201ENST00000320578 PPIAL4FP0DN26 164 aa14.85□□□□□ -0.03
RAB39A-201ENST00000320578 EDDM3AQ14507 147 aa14.85□□□□□ -0.03
RAB39A-201ENST00000320578 TMEM30BQ3MIR4 351 aa14.85□□□□□ -0.03
RAB39A-201ENST00000320578 LRRC37A5PQ49AS3 106 aa14.85□□□□□ -0.03
RAB39A-201ENST00000320578 PKD1L2Q7Z442 2459 aa14.85□□□□□ -0.03
RAB39A-201ENST00000320578 LYZL2Q7Z4W2 148 aa14.85□□□□□ -0.03
RAB39A-201ENST00000320578 SELENOHQ8IZQ5 122 aaKnown RBP14.85□□□□□ -0.03
RAB39A-201ENST00000320578 MUC15Q8N387 334 aa14.85□□□□□ -0.03
RAB39A-201ENST00000320578 ZNF645Q8N7E2 425 aa14.85□□□□□ -0.03
RAB39A-201ENST00000320578 OR8H1Q8NGG4 311 aa14.85□□□□□ -0.03
RAB39A-201ENST00000320578 LHFPL5Q8TAF8 219 aa14.85□□□□□ -0.03
RAB39A-201ENST00000320578 CORO2AQ92828 525 aa14.85□□□□□ -0.03
RAB39A-201ENST00000320578 LINC00574Q9H8X3 128 aa14.85□□□□□ -0.03
RAB39A-201ENST00000320578 MBD2Q9UBB5 411 aa14.85□□□□□ -0.03
RAB39A-201ENST00000320578 PPIAL4AQ9Y536 164 aa14.85□□□□□ -0.03
RAB39A-201ENST00000320578 RBM7Q9Y580 266 aaKnown RBP14.85□□□□□ -0.03
RAB39A-201ENST00000320578 RNF212BA8MTL3 300 aa14.84□□□□□ -0.03
RAB39A-201ENST00000320578 ITGB1BP1O14713 200 aa14.84□□□□□ -0.03
RAB39A-201ENST00000320578 TNFRSF13BO14836 293 aaPredicted RBP14.84□□□□□ -0.03
RAB39A-201ENST00000320578 IFNA7P01567 189 aa14.84□□□□□ -0.03
RAB39A-201ENST00000320578 OR8U9P0C7N5 309 aa14.84□□□□□ -0.03
RAB39A-201ENST00000320578 PPOXP50336 477 aa14.84□□□□□ -0.03
RAB39A-201ENST00000320578 ZNF695Q8IW36 515 aa14.84□□□□□ -0.03
RAB39A-201ENST00000320578 TPRX1Q8N7U7 411 aa14.84□□□□□ -0.03
RAB39A-201ENST00000320578 INO80EQ8NBZ0 244 aaPredicted RBP14.84□□□□□ -0.03
RAB39A-201ENST00000320578 ZNF680Q8NEM1 530 aa14.84□□□□□ -0.03
RAB39A-201ENST00000320578 OR52L2PQ8NGH6 319 aa14.84□□□□□ -0.03
RAB39A-201ENST00000320578 OR8U1Q8NH10 309 aa14.84□□□□□ -0.03
RAB39A-201ENST00000320578 CNTNAP3BQ96NU0 1288 aa14.84□□□□□ -0.03
RAB39A-201ENST00000320578 CNTNAP3Q9BZ76 1288 aa14.84□□□□□ -0.03
RAB39A-201ENST00000320578 ARL6Q9H0F7 186 aa14.84□□□□□ -0.03
RAB39A-201ENST00000320578 OR2S2Q9NQN1 319 aa14.84□□□□□ -0.03
RAB39A-201ENST00000320578 CLEC18AA5D8T8 446 aa14.83□□□□□ -0.04
RAB39A-201ENST00000320578 RNF222A6NCQ9 220 aa14.83□□□□□ -0.04
RAB39A-201ENST00000320578 H0YIZ8 118 aa14.83□□□□□ -0.04
RAB39A-201ENST00000320578 YPEL1O60688 119 aa14.83□□□□□ -0.04
RAB39A-201ENST00000320578 SSTR5P35346 364 aa14.83□□□□□ -0.04
RAB39A-201ENST00000320578 TMEM268Q5VZI3 342 aa14.83□□□□□ -0.04
RAB39A-201ENST00000320578 ZCCHC24Q8N2G6 241 aaKnown RBP14.83□□□□□ -0.04
RAB39A-201ENST00000320578 SLC35G3Q8N808 338 aa14.83□□□□□ -0.04
RAB39A-201ENST00000320578 CLEC18CQ8NCF0 446 aa14.83□□□□□ -0.04
RAB39A-201ENST00000320578 ITLN2Q8WWU7 325 aaPredicted RBP14.83□□□□□ -0.04
RAB39A-201ENST00000320578 EDARADDQ8WWZ3 215 aa14.83□□□□□ -0.04
RAB39A-201ENST00000320578 RBPMSQ93062 196 aaKnown RBP14.83□□□□□ -0.04
RAB39A-201ENST00000320578 YPEL2Q96QA6 119 aa14.83□□□□□ -0.04
RAB39A-201ENST00000320578 SPIN2AQ99865 258 aa14.83□□□□□ -0.04
RAB39A-201ENST00000320578 SPIN2BQ9BPZ2 258 aa14.83□□□□□ -0.04
RAB39A-201ENST00000320578 FAM212BQ9NTI7 297 aaPredicted RBP14.83□□□□□ -0.04
RAB39A-201ENST00000320578 NDUFA2O43678 99 aa14.82□□□□□ -0.04
RAB39A-201ENST00000320578 RP2O75695 350 aa14.82□□□□□ -0.04
RAB39A-201ENST00000320578 GYPAP02724 150 aa14.82□□□□□ -0.04
RAB39A-201ENST00000320578 VDAC1P21796 283 aa14.82□□□□□ -0.04
RAB39A-201ENST00000320578 GNLYP22749 145 aa14.82□□□□□ -0.04
RAB39A-201ENST00000320578 RAB32Q13637 225 aa14.82□□□□□ -0.04
RAB39A-201ENST00000320578 DRAM1Q8N682 238 aa14.82□□□□□ -0.04
RAB39A-201ENST00000320578 TCTEX1D1Q8N7M0 179 aa14.82□□□□□ -0.04
RAB39A-201ENST00000320578 UBALD1Q8TB05 177 aa14.82□□□□□ -0.04
RAB39A-201ENST00000320578 CCL13Q99616 98 aa14.82□□□□□ -0.04
RAB39A-201ENST00000320578 LIN7CQ9NUP9 197 aaKnown RBP14.82□□□□□ -0.04
RAB39A-201ENST00000320578 GSKIPQ9P0R6 139 aa14.82□□□□□ -0.04
RAB39A-201ENST00000320578 RLN2P04090 185 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms