RNA–Protein interactions for RNA: ENST00000317201.6

HOXA3-201, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXA3, Length 2,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-201ENST00000317201 PCBD1P61457 104 aa12.63□□□□□ -0.39
HOXA3-201ENST00000317201 RND3P61587 244 aa12.63□□□□□ -0.39
HOXA3-201ENST00000317201 MPV17LQ2QL34 196 aa12.63□□□□□ -0.39
HOXA3-201ENST00000317201 OR51A2Q8NGJ7 313 aa12.63□□□□□ -0.39
HOXA3-201ENST00000317201 PPP1R14AQ96A00 147 aa12.63□□□□□ -0.39
HOXA3-201ENST00000317201 FOXB1Q99853 325 aa12.63□□□□□ -0.39
HOXA3-201ENST00000317201 PRRG4Q9BZD6 226 aa12.63□□□□□ -0.39
HOXA3-201ENST00000317201 CST9LQ9H4G1 147 aa12.63□□□□□ -0.39
HOXA3-201ENST00000317201 LOC100289279A0A1B0GTE1 492 aa12.63□□□□□ -0.39
HOXA3-201ENST00000317201 FAM221AA4D161 298 aa12.63□□□□□ -0.39
HOXA3-201ENST00000317201 AHRRA9YTQ3 701 aa12.63□□□□□ -0.39
HOXA3-201ENST00000317201 KLK10O43240 276 aa12.63□□□□□ -0.39
HOXA3-201ENST00000317201 CX3CR1P49238 355 aa12.63□□□□□ -0.39
HOXA3-201ENST00000317201 CYCSP99999 105 aaKnown RBP12.63□□□□□ -0.39
HOXA3-201ENST00000317201 MS4A10Q96PG2 267 aa12.63□□□□□ -0.39
HOXA3-201ENST00000317201 CDH20Q9HBT6 801 aa12.63□□□□□ -0.39
HOXA3-201ENST00000317201 ZNF319Q9P2F9 582 aa12.63□□□□□ -0.39
HOXA3-201ENST00000317201 LAMP3Q9UQV4 416 aa12.63□□□□□ -0.39
HOXA3-201ENST00000317201 GVINP1Q7Z2Y8 2422 aa12.62□□□□□ -0.39
HOXA3-201ENST00000317201 RBFOX3A6NFN3 312 aa12.62□□□□□ -0.39
HOXA3-201ENST00000317201 ERVS71-1P61550 626 aa12.62□□□□□ -0.39
HOXA3-201ENST00000317201 SLC25A26Q70HW3 274 aa12.62□□□□□ -0.39
HOXA3-201ENST00000317201 FNDC9Q8TBE3 224 aa12.62□□□□□ -0.39
HOXA3-201ENST00000317201 ZNF837Q96EG3 531 aaPredicted RBP12.62□□□□□ -0.39
HOXA3-201ENST00000317201 JTBO76095 146 aa12.62□□□□□ -0.39
HOXA3-201ENST00000317201 CEACAM16Q2WEN9 425 aa12.62□□□□□ -0.39
HOXA3-201ENST00000317201 KRTAP27-1Q3LI81 207 aa12.62□□□□□ -0.39
HOXA3-201ENST00000317201 ADGRE4PQ86SQ3 457 aa12.62□□□□□ -0.39
HOXA3-201ENST00000317201 TUSC5Q8IXB3 177 aa12.62□□□□□ -0.39
HOXA3-201ENST00000317201 SLC22A24Q8N4F4 322 aa12.62□□□□□ -0.39
HOXA3-201ENST00000317201 FUT9Q9Y231 359 aa12.62□□□□□ -0.39
HOXA3-201ENST00000317201 SCGB1D2O95969 90 aa12.61□□□□□ -0.39
HOXA3-201ENST00000317201 IGLV3-1P01715 115 aa12.61□□□□□ -0.39
HOXA3-201ENST00000317201 ZNF121P58317 390 aaPredicted RBP12.61□□□□□ -0.39
HOXA3-201ENST00000317201 ASPHD2Q6ICH7 369 aa12.61□□□□□ -0.39
HOXA3-201ENST00000317201 Q6ZSR3 168 aa12.61□□□□□ -0.39
HOXA3-201ENST00000317201 ZNF584Q8IVC4 421 aa12.61□□□□□ -0.39
HOXA3-201ENST00000317201 MCEMP1Q8IX19 187 aa12.61□□□□□ -0.39
HOXA3-201ENST00000317201 OR5D18Q8NGL1 313 aa12.61□□□□□ -0.39
HOXA3-201ENST00000317201 SPTSSAQ969W0 71 aa12.61□□□□□ -0.39
HOXA3-201ENST00000317201 SLC2A9Q9NRM0 540 aa12.61□□□□□ -0.39
HOXA3-201ENST00000317201 LSM5Q9Y4Y9 91 aaKnown RBP12.61□□□□□ -0.39
HOXA3-201ENST00000317201 P2RY10O00398 339 aa12.61□□□□□ -0.39
HOXA3-201ENST00000317201 SRP19P09132 144 aaKnown RBP12.61□□□□□ -0.39
HOXA3-201ENST00000317201 HINT1P49773 126 aaPredicted RBP12.61□□□□□ -0.39
HOXA3-201ENST00000317201 UCP2P55851 309 aa12.61□□□□□ -0.39
HOXA3-201ENST00000317201 VAMP3Q15836 100 aa12.61□□□□□ -0.39
HOXA3-201ENST00000317201 SAXO1Q8IYX7 474 aa12.61□□□□□ -0.39
HOXA3-201ENST00000317201 RIF1Q5UIP0 2472 aaKnown RBP12.6□□□□□ -0.39
HOXA3-201ENST00000317201 DCDC2BA2VCK2 349 aa12.6□□□□□ -0.39
HOXA3-201ENST00000317201 TAAR5O14804 337 aa12.6□□□□□ -0.39
HOXA3-201ENST00000317201 SYNGR3O43761 229 aa12.6□□□□□ -0.39
HOXA3-201ENST00000317201 NUPR1O60356 82 aa12.6□□□□□ -0.39
HOXA3-201ENST00000317201 TPTE2P1Q5T6R2 138 aa12.6□□□□□ -0.39
HOXA3-201ENST00000317201 TSPO2Q5TGU0 170 aa12.6□□□□□ -0.39
HOXA3-201ENST00000317201 FAM166AQ6J272 317 aa12.6□□□□□ -0.39
HOXA3-201ENST00000317201 DOK3Q7L591 496 aa12.6□□□□□ -0.39
HOXA3-201ENST00000317201 LINC01551Q86U37 167 aa12.6□□□□□ -0.39
HOXA3-201ENST00000317201 TMEM256Q8N2U0 113 aa12.6□□□□□ -0.39
HOXA3-201ENST00000317201 OR8B12Q8NGG6 310 aa12.6□□□□□ -0.39
HOXA3-201ENST00000317201 FAM3DQ96BQ1 224 aa12.6□□□□□ -0.39
HOXA3-201ENST00000317201 ZNF701Q9NV72 531 aaPredicted RBP12.6□□□□□ -0.39
HOXA3-201ENST00000317201 SLC22A20A6NK97 555 aa12.6□□□□□ -0.39
HOXA3-201ENST00000317201 CLDN34H7C241 214 aa12.6□□□□□ -0.39
HOXA3-201ENST00000317201 TNFSF13O75888 250 aa12.6□□□□□ -0.39
HOXA3-201ENST00000317201 NBEAP1P0C6P0 100 aa12.6□□□□□ -0.39
HOXA3-201ENST00000317201 CRYGSP22914 178 aa12.6□□□□□ -0.39
HOXA3-201ENST00000317201 HRH1P35367 487 aa12.6□□□□□ -0.39
HOXA3-201ENST00000317201 FAM3AP98173 230 aa12.6□□□□□ -0.39
HOXA3-201ENST00000317201 FOXC1Q12948 553 aa12.6□□□□□ -0.39
HOXA3-201ENST00000317201 ABHD12BQ7Z5M8 362 aaPredicted RBP12.6□□□□□ -0.39
HOXA3-201ENST00000317201 PLPP7Q8NBV4 271 aa12.6□□□□□ -0.39
HOXA3-201ENST00000317201 VN1R17PQ8TDU5 208 aa12.6□□□□□ -0.39
HOXA3-201ENST00000317201 APH1AQ96BI3 265 aa12.6□□□□□ -0.39
HOXA3-201ENST00000317201 PINX1Q96BK5 328 aaKnown RBP12.6□□□□□ -0.39
HOXA3-201ENST00000317201 RPUSD4Q96CM3 377 aaKnown RBP12.6□□□□□ -0.39
HOXA3-201ENST00000317201 CMBLQ96DG6 245 aa12.6□□□□□ -0.39
HOXA3-201ENST00000317201 SLC5A6Q9Y289 635 aa12.6□□□□□ -0.39
HOXA3-201ENST00000317201 OR6C6A6NF89 314 aa12.59□□□□□ -0.39
HOXA3-201ENST00000317201 SLC17A2O00624 439 aa12.59□□□□□ -0.39
HOXA3-201ENST00000317201 PSG1P11464 419 aa12.59□□□□□ -0.39
HOXA3-201ENST00000317201 CCKARP32238 428 aa12.59□□□□□ -0.39
HOXA3-201ENST00000317201 PMP22Q01453 160 aa12.59□□□□□ -0.39
HOXA3-201ENST00000317201 Q6ZS92 163 aa12.59□□□□□ -0.39
HOXA3-201ENST00000317201 ZNF709Q8N972 641 aa12.59□□□□□ -0.39
HOXA3-201ENST00000317201 MEGF9Q9H1U4 602 aa12.59□□□□□ -0.39
HOXA3-201ENST00000317201 WFDC1Q9HC57 220 aa12.59□□□□□ -0.39
HOXA3-201ENST00000317201 PLEK2Q9NYT0 353 aa12.59□□□□□ -0.39
HOXA3-201ENST00000317201 OR6C3Q9NZP0 311 aa12.59□□□□□ -0.39
HOXA3-201ENST00000317201 DKK4Q9UBT3 224 aa12.59□□□□□ -0.39
HOXA3-201ENST00000317201 C14orf166Q9Y224 244 aaKnown RBP12.59□□□□□ -0.39
HOXA3-201ENST00000317201 OSGIN2Q9Y236 505 aa12.59□□□□□ -0.39
HOXA3-201ENST00000317201 MRPS28Q9Y2Q9 187 aaKnown RBP12.59□□□□□ -0.39
HOXA3-201ENST00000317201 WSB1Q9Y6I7 421 aa12.59□□□□□ -0.39
HOXA3-201ENST00000317201 CNOT1A5YKK6 2376 aaKnown RBP12.59□□□□□ -0.39
HOXA3-201ENST00000317201 CTXN2P0C2S0 81 aa12.59□□□□□ -0.39
HOXA3-201ENST00000317201 HLA-DRB3P79483 266 aa12.59□□□□□ -0.39
HOXA3-201ENST00000317201 RSPO1Q2MKA7 263 aaPredicted RBP12.59□□□□□ -0.39
HOXA3-201ENST00000317201 ANKRD55Q3KP44 614 aa12.59□□□□□ -0.39
HOXA3-201ENST00000317201 SELENOHQ8IZQ5 122 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms