RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 FA2HQ7L5A8 372 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 H1FOOQ8IZA3 346 aaPredicted RBP11.93□□□□□ -0.5
SPAST-201ENST00000315285 HSF4Q9ULV5 492 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 ZDBF2Q9HCK1 2354 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 Q56UQ5 140 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 DHRS7BQ6IAN0 325 aaPredicted RBP11.93□□□□□ -0.5
SPAST-201ENST00000315285 CRIPAKQ8N1N5 446 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 SAP25Q8TEE9 199 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 DNASE2BQ8WZ79 361 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 CLN8Q9UBY8 286 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 A0A0G2JMZ2 1700 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 LRRC37A2A6NM11 1700 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 TGFBR3LH3BV60 316 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 MMP7P09237 267 aaPredicted RBP11.93□□□□□ -0.5
SPAST-201ENST00000315285 TIPARPQ7Z3E1 657 aaKnown RBP11.93□□□□□ -0.5
SPAST-201ENST00000315285 RNF2Q99496 336 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 CHRNA10Q9GZZ6 450 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 A0A0B4J293 547 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 A0A1W2PQM1 296 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 FAM90A10PA6NDY2 464 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 FAM90A18PA6NE21 464 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 FAM90A16PA6NEW6 464 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 FAM90A20PA6NIJ5 464 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 FAM90A8PA6NJQ4 464 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 FAM90A7PA6NKC0 464 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 FAM74A7A6NL05 159 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 DHRS7CA6NNS2 312 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 FAM90A22PA8MWA6 464 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 FAM90A12PA8MX19 464 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 FAM90A5PA8MXJ8 464 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 FAM90A23PA8MXZ1 464 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 FAM90A15PP0C7V4 464 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 FAM90A13PP0C7W8 464 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 FAM90A14PP0C7W9 464 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 FAM90A24PP0C7X0 464 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 MMP9P14780 707 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 SERF2P84101 59 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 UBE2V2Q15819 145 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 CYB561D1Q8N8Q1 229 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 IL22RA2Q969J5 263 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 SPSB2Q99619 263 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 CASP8AP2Q9UKL3 1982 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 ZNHIT1O43257 154 aa11.92□□□□□ -0.5
SPAST-201ENST00000315285 FCER1GP30273 86 aa11.92□□□□□ -0.5
SPAST-201ENST00000315285 B2MP61769 119 aa11.92□□□□□ -0.5
SPAST-201ENST00000315285 RIPPLY2Q5TAB7 128 aa11.92□□□□□ -0.5
SPAST-201ENST00000315285 Q96M66 194 aa11.92□□□□□ -0.5
SPAST-201ENST00000315285 ZNF785A8K8V0 405 aa11.92□□□□□ -0.5
SPAST-201ENST00000315285 SYNGR1O43759 233 aa11.92□□□□□ -0.5
SPAST-201ENST00000315285 CRISP2P16562 243 aa11.92□□□□□ -0.5
SPAST-201ENST00000315285 ZP1P60852 638 aa11.92□□□□□ -0.5
SPAST-201ENST00000315285 VAMP3Q15836 100 aa11.92□□□□□ -0.5
SPAST-201ENST00000315285 MS4A3Q96HJ5 214 aa11.92□□□□□ -0.5
SPAST-201ENST00000315285 PACRGQ96M98 296 aaPredicted RBP11.92□□□□□ -0.5
SPAST-201ENST00000315285 PRNDQ9UKY0 176 aa11.92□□□□□ -0.5
SPAST-201ENST00000315285 FAM90A27PA6NNH2 459 aa11.92□□□□□ -0.5
SPAST-201ENST00000315285 PPIHO43447 177 aaKnown RBP11.92□□□□□ -0.5
SPAST-201ENST00000315285 BCL2P10415 239 aa11.92□□□□□ -0.5
SPAST-201ENST00000315285 SPNS3Q6ZMD2 512 aa11.92□□□□□ -0.5
SPAST-201ENST00000315285 LRRC3CA6NJW4 275 aa11.92□□□□□ -0.5
SPAST-201ENST00000315285 PDE6DO43924 150 aa11.92□□□□□ -0.5
SPAST-201ENST00000315285 NPY1RP25929 384 aa11.92□□□□□ -0.5
SPAST-201ENST00000315285 TNXAQ16473 311 aa11.92□□□□□ -0.5
SPAST-201ENST00000315285 TMEM183BQ1AE95 376 aa11.92□□□□□ -0.5
SPAST-201ENST00000315285 GVINP1Q7Z2Y8 2422 aa11.92□□□□□ -0.5
SPAST-201ENST00000315285 CAMPP49913 170 aa11.91□□□□□ -0.5
SPAST-201ENST00000315285 RPS11P62280 158 aaKnown RBP eCLIP11.91□□□□□ -0.5
SPAST-201ENST00000315285 CXorf66Q5JRM2 361 aaPredicted RBP11.91□□□□□ -0.5
SPAST-201ENST00000315285 ZNF362Q5T0B9 420 aaPredicted RBP11.91□□□□□ -0.5
SPAST-201ENST00000315285 VWCEQ96DN2 955 aa11.91□□□□□ -0.5
SPAST-201ENST00000315285 ZNF665Q9H7R5 613 aa11.91□□□□□ -0.5
SPAST-201ENST00000315285 SAP30LQ9HAJ7 183 aa11.91□□□□□ -0.5
SPAST-201ENST00000315285 YTHDF2Q9Y5A9 579 aaKnown RBP11.91□□□□□ -0.5
SPAST-201ENST00000315285 ZNF98A6NK75 572 aa11.91□□□□□ -0.5
SPAST-201ENST00000315285 AMTP48728 403 aa11.91□□□□□ -0.5
SPAST-201ENST00000315285 LINC00114Q6XXX2 140 aa11.91□□□□□ -0.5
SPAST-201ENST00000315285 MARVELD3Q96A59 401 aa11.91□□□□□ -0.5
SPAST-201ENST00000315285 PCOLCEQ15113 449 aa11.91□□□□□ -0.5
SPAST-201ENST00000315285 NR2C2APQ86WQ0 139 aa11.91□□□□□ -0.5
SPAST-201ENST00000315285 TPRX1Q8N7U7 411 aa11.91□□□□□ -0.5
SPAST-201ENST00000315285 TLNRD1Q9H1K6 362 aa11.91□□□□□ -0.5
SPAST-201ENST00000315285 ZNF71Q9NQZ8 489 aaPredicted RBP11.91□□□□□ -0.5
SPAST-201ENST00000315285 RECKO95980 971 aa11.91□□□□□ -0.5
SPAST-201ENST00000315285 COX6A1P12074 109 aa11.91□□□□□ -0.5
SPAST-201ENST00000315285 RPL29P47914 159 aaKnown RBP11.91□□□□□ -0.5
SPAST-201ENST00000315285 TCL1AP56279 114 aa11.91□□□□□ -0.5
SPAST-201ENST00000315285 STARD6P59095 220 aa11.91□□□□□ -0.5
SPAST-201ENST00000315285 PDPNQ86YL7 162 aa11.91□□□□□ -0.5
SPAST-201ENST00000315285 RSG1Q9BU20 258 aa11.91□□□□□ -0.5
SPAST-201ENST00000315285 FUT9Q9Y231 359 aa11.91□□□□□ -0.5
SPAST-201ENST00000315285 AMMECR1Q9Y4X0 333 aaPredicted RBP11.91□□□□□ -0.5
SPAST-201ENST00000315285 ICE1Q9Y2F5 2266 aa11.9□□□□□ -0.5
SPAST-201ENST00000315285 IGHV3OR15-7A0A075B7D8 119 aa11.9□□□□□ -0.5
SPAST-201ENST00000315285 K7ESF4 209 aa11.9□□□□□ -0.5
SPAST-201ENST00000315285 ADRA2AP08913 450 aa11.9□□□□□ -0.5
SPAST-201ENST00000315285 SPCS3P61009 180 aa11.9□□□□□ -0.5
SPAST-201ENST00000315285 LYZP61626 148 aa11.9□□□□□ -0.5
SPAST-201ENST00000315285 COL10A1Q03692 680 aa11.9□□□□□ -0.5
SPAST-201ENST00000315285 PIPOXQ9P0Z9 390 aa11.9□□□□□ -0.5
SPAST-201ENST00000315285 MIOXQ9UGB7 285 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms