RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 ZNF680Q8NEM1 530 aa12.16□□□□□ -0.46
SHCBP1-201ENST00000303383 OR51H1Q8NH63 302 aa12.16□□□□□ -0.46
SHCBP1-201ENST00000303383 RNASE11Q8TAA1 199 aaKnown RBP12.16□□□□□ -0.46
SHCBP1-201ENST00000303383 BSNQ9UPA5 3926 aa12.16□□□□□ -0.46
SHCBP1-201ENST00000303383 C12orf77C9JDV5 145 aa12.16□□□□□ -0.46
SHCBP1-201ENST00000303383 HBZP02008 142 aa12.16□□□□□ -0.46
SHCBP1-201ENST00000303383 TESK1Q15569 626 aa12.16□□□□□ -0.46
SHCBP1-201ENST00000303383 TMEM65Q6PI78 240 aa12.16□□□□□ -0.46
SHCBP1-201ENST00000303383 LYZL2Q7Z4W2 148 aa12.16□□□□□ -0.46
SHCBP1-201ENST00000303383 ZNRF1Q8ND25 227 aa12.16□□□□□ -0.46
SHCBP1-201ENST00000303383 GLYATL2Q8WU03 294 aa12.16□□□□□ -0.46
SHCBP1-201ENST00000303383 TP53RKQ96S44 253 aa12.16□□□□□ -0.46
SHCBP1-201ENST00000303383 GPHA2Q96T91 129 aa12.16□□□□□ -0.46
SHCBP1-201ENST00000303383 UBQLN2Q9UHD9 624 aa12.16□□□□□ -0.46
SHCBP1-201ENST00000303383 OR2F2O95006 317 aa12.16□□□□□ -0.46
SHCBP1-201ENST00000303383 ADORA2A-AS1P86434 159 aa12.16□□□□□ -0.46
SHCBP1-201ENST00000303383 OR2F1Q13607 317 aa12.16□□□□□ -0.46
SHCBP1-201ENST00000303383 LTC4SQ16873 150 aa12.16□□□□□ -0.46
SHCBP1-201ENST00000303383 TRAT1Q6PIZ9 186 aa12.16□□□□□ -0.46
SHCBP1-201ENST00000303383 ACOT7LQ6ZUV0 252 aa12.16□□□□□ -0.46
SHCBP1-201ENST00000303383 C1orf87Q8N0U7 546 aa12.16□□□□□ -0.46
SHCBP1-201ENST00000303383 RFESDQ8TAC1 157 aa12.16□□□□□ -0.46
SHCBP1-201ENST00000303383 OR2S2Q9NQN1 319 aa12.16□□□□□ -0.46
SHCBP1-201ENST00000303383 RNF115Q9Y4L5 304 aa12.16□□□□□ -0.46
SHCBP1-201ENST00000303383 ANKHD1Q8IWZ3 2542 aaKnown RBP12.15□□□□□ -0.46
SHCBP1-201ENST00000303383 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.15□□□□□ -0.46
SHCBP1-201ENST00000303383 SERPINE2P07093 398 aa12.15□□□□□ -0.46
SHCBP1-201ENST00000303383 RND3P61587 244 aa12.15□□□□□ -0.46
SHCBP1-201ENST00000303383 RAB32Q13637 225 aa12.15□□□□□ -0.46
SHCBP1-201ENST00000303383 FBXL19-AS1Q494R0 122 aa12.15□□□□□ -0.46
SHCBP1-201ENST00000303383 GALNT11Q8NCW6 608 aa12.15□□□□□ -0.46
SHCBP1-201ENST00000303383 MS4A5Q9H3V2 200 aa12.15□□□□□ -0.46
SHCBP1-201ENST00000303383 LSM5Q9Y4Y9 91 aaKnown RBP12.15□□□□□ -0.46
SHCBP1-201ENST00000303383 NPIPB11E5RHQ5 1161 aa12.15□□□□□ -0.46
SHCBP1-201ENST00000303383 GRNP28799 593 aaKnown RBP12.15□□□□□ -0.46
SHCBP1-201ENST00000303383 OR5D13Q8NGL4 314 aa12.15□□□□□ -0.46
SHCBP1-201ENST00000303383 NEUROG1Q92886 237 aa12.15□□□□□ -0.46
SHCBP1-201ENST00000303383 TNFSF18Q9UNG2 199 aa12.15□□□□□ -0.46
SHCBP1-201ENST00000303383 APOBEC3AP31941 199 aaPredicted RBP12.14□□□□□ -0.47
SHCBP1-201ENST00000303383 C21orf62-AS1Q17RA5 79 aa12.14□□□□□ -0.47
SHCBP1-201ENST00000303383 OR13A1Q8NGR1 328 aa12.14□□□□□ -0.47
SHCBP1-201ENST00000303383 TMEM222Q9H0R3 208 aa12.14□□□□□ -0.47
SHCBP1-201ENST00000303383 CISD1Q9NZ45 108 aaKnown RBP12.14□□□□□ -0.47
SHCBP1-201ENST00000303383 SPTBN1Q01082 2364 aaKnown RBP12.14□□□□□ -0.47
SHCBP1-201ENST00000303383 SHISA9B4DS77 424 aa12.14□□□□□ -0.47
SHCBP1-201ENST00000303383 E7EQL1 145 aa12.14□□□□□ -0.47
SHCBP1-201ENST00000303383 ZZEF1O43149 2961 aa12.14□□□□□ -0.47
SHCBP1-201ENST00000303383 CCL17Q92583 94 aa12.14□□□□□ -0.47
SHCBP1-201ENST00000303383 LURAP1Q96LR2 239 aa12.14□□□□□ -0.47
SHCBP1-201ENST00000303383 SHARPINQ9H0F6 387 aa12.14□□□□□ -0.47
SHCBP1-201ENST00000303383 TMED3Q9Y3Q3 217 aa12.14□□□□□ -0.47
SHCBP1-201ENST00000303383 ODAMA1E959 279 aa12.14□□□□□ -0.47
SHCBP1-201ENST00000303383 PGLYRP1O75594 196 aaPredicted RBP12.14□□□□□ -0.47
SHCBP1-201ENST00000303383 LHBP01229 141 aa12.14□□□□□ -0.47
SHCBP1-201ENST00000303383 GZMHP20718 246 aa12.14□□□□□ -0.47
SHCBP1-201ENST00000303383 SSTR5P35346 364 aa12.14□□□□□ -0.47
SHCBP1-201ENST00000303383 EXOSC2Q13868 293 aaKnown RBP12.14□□□□□ -0.47
SHCBP1-201ENST00000303383 FAM122CQ6P4D5 195 aa12.14□□□□□ -0.47
SHCBP1-201ENST00000303383 FAM219AQ8IW50 185 aa12.14□□□□□ -0.47
SHCBP1-201ENST00000303383 SLC35G3Q8N808 338 aa12.14□□□□□ -0.47
SHCBP1-201ENST00000303383 OR52L2PQ8NGH6 319 aa12.14□□□□□ -0.47
SHCBP1-201ENST00000303383 MSI2Q96DH6 328 aaKnown RBP12.14□□□□□ -0.47
SHCBP1-201ENST00000303383 GNG12Q9UBI6 72 aa12.14□□□□□ -0.47
SHCBP1-201ENST00000303383 NKX6-3A6NJ46 265 aa12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 ZNF737O75373 536 aa12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 GYPAP02724 150 aa12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 HEXAP06865 529 aa12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 P2RX3P56373 397 aa12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 PRSS54Q6PEW0 395 aa12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 ZNF561Q8N587 486 aa12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 ANGPTL6Q8NI99 470 aa12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 SPIN2AQ99865 258 aa12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 SPIN2BQ9BPZ2 258 aa12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 ZNF471Q9BX82 626 aaPredicted RBP12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 ZNF665Q9H7R5 613 aa12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 HEXA-AS1Q9H8Q6 139 aa12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 RNF150Q9ULK6 438 aa12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 IGHV3-43A0A0B4J1X8 118 aa12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 PIGBOS1A0A0B4J2F0 54 aa12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 SPDEFO95238 335 aa12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 IGHV3-43DP0DP04 118 aa12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 AKR1E2Q96JD6 320 aa12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 DYSFO75923 2080 aa12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 F5H0A9 414 aaPredicted RBP12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 K7N7A8 449 aa12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 MUC1P15941 1255 aaPredicted RBP12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 M6PRP20645 277 aa12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 F2RP25116 425 aa12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 LRTM2Q8N967 370 aa12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 BVESQ8NE79 360 aa12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 Q8TCH9 128 aa12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 CCL13Q99616 98 aa12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 DCTN5Q9BTE1 182 aa12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 RAB9BQ9NP90 201 aa12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 ZFP57Q9NU63 452 aa12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 OR6C3Q9NZP0 311 aa12.13□□□□□ -0.47
SHCBP1-201ENST00000303383 ABCA4P78363 2273 aa12.12□□□□□ -0.47
SHCBP1-201ENST00000303383 PKD1L2Q7Z442 2459 aa12.12□□□□□ -0.47
SHCBP1-201ENST00000303383 B9A039 149 aa12.12□□□□□ -0.47
SHCBP1-201ENST00000303383 PPP1CCP36873 323 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms