RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 PSMB11A5LHX3 300 aa9.1□□□□□ -0.95
CLIP1-201ENST00000302528 IL4P05112 153 aa9.1□□□□□ -0.95
CLIP1-201ENST00000302528 CTLA4P16410 223 aa9.1□□□□□ -0.95
CLIP1-201ENST00000302528 Q6ZS52 159 aa9.1□□□□□ -0.95
CLIP1-201ENST00000302528 OR6X1Q8NH79 312 aa9.1□□□□□ -0.95
CLIP1-201ENST00000302528 FAM216AQ8WUB2 273 aa9.1□□□□□ -0.95
CLIP1-201ENST00000302528 GALNT14Q96FL9 552 aa9.1□□□□□ -0.95
CLIP1-201ENST00000302528 DMRTA2Q96SC8 542 aa9.1□□□□□ -0.95
CLIP1-201ENST00000302528 NTMQ9P121 344 aa9.1□□□□□ -0.95
CLIP1-201ENST00000302528 EXOGQ9Y2C4 368 aaKnown RBP9.1□□□□□ -0.95
CLIP1-201ENST00000302528 SF3B6Q9Y3B4 125 aaKnown RBP9.1□□□□□ -0.95
CLIP1-201ENST00000302528 A0A1W2PPE3 182 aa9.1□□□□□ -0.95
CLIP1-201ENST00000302528 HAX1O00165 279 aa9.1□□□□□ -0.95
CLIP1-201ENST00000302528 SOCS1O15524 211 aa9.1□□□□□ -0.95
CLIP1-201ENST00000302528 HYAL3O43820 417 aaPredicted RBP9.1□□□□□ -0.95
CLIP1-201ENST00000302528 LEPROTL1O95214 131 aa9.1□□□□□ -0.95
CLIP1-201ENST00000302528 C3AR1Q16581 482 aa9.1□□□□□ -0.95
CLIP1-201ENST00000302528 CLEC2AQ6UVW9 174 aa9.1□□□□□ -0.95
CLIP1-201ENST00000302528 PDFQ9HBH1 243 aa9.1□□□□□ -0.95
CLIP1-201ENST00000302528 C7orf71A4D174 169 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 J3QT63 122 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 CRYBB2P43320 205 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 RAC3P60763 192 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 ZNF56Q15929 161 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 STPG2Q8N412 459 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 APOBEC4Q8WW27 367 aaKnown RBP9.09□□□□□ -0.95
CLIP1-201ENST00000302528 WDFY2Q96P53 400 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 GPR82Q96P67 336 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 RNF122Q9H9V4 155 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 TCRBV16S1A1N1A0A5B0 115 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 MT-ND6P03923 174 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 PSG2P11465 335 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 CX3CL1P78423 397 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 B4GALNT1Q00973 533 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 GGTLC2Q14390 218 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 PMCHL1Q16048 86 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 KRTCAP3Q53RY4 240 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 IBA57Q5T440 356 aaKnown RBP9.09□□□□□ -0.95
CLIP1-201ENST00000302528 OR10AC1Q8NH08 325 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 HILPDAQ9Y5L2 63 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 MOSPD3O75425 235 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 ANOS1P23352 680 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 RPL27AP46776 148 aaKnown RBP9.09□□□□□ -0.95
CLIP1-201ENST00000302528 TEX30Q5JUR7 227 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 FAM74A4Q5TZK3 123 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 TRAF4Q9BUZ4 470 aaPredicted RBP9.09□□□□□ -0.95
CLIP1-201ENST00000302528 DPH3P1Q9H4G8 78 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 PPIAL4EA0A075B759 164 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 CEACAM18A8MTB9 384 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 PPIAL4DF5H284 164 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 FAM106CPP0CH98 169 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 PPIAL4FP0DN26 164 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 RPL31P62899 125 aaKnown RBP9.09□□□□□ -0.95
CLIP1-201ENST00000302528 THSD4Q6ZMP0 1018 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 MDP1Q86V88 176 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 RGP1Q92546 391 aaPredicted RBP9.09□□□□□ -0.95
CLIP1-201ENST00000302528 DUX5Q96PT3 197 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 CHODLQ9H9P2 273 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 PPIAL4AQ9Y536 164 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 OTX1P32242 354 aaPredicted RBP9.09□□□□□ -0.95
CLIP1-201ENST00000302528 ZNF506Q5JVG8 444 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 ASB10Q8WXI3 467 aa9.09□□□□□ -0.95
CLIP1-201ENST00000302528 IGHV5-51A0A0C4DH38 117 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.08□□□□□ -0.96
CLIP1-201ENST00000302528 NPFFO15130 113 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 PPM1DO15297 605 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 FCGR2BP31994 310 aaPredicted RBP9.08□□□□□ -0.96
CLIP1-201ENST00000302528 SLC25A34Q6PIV7 304 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 C16orf47Q6ZP98 133 aaPredicted RBP9.08□□□□□ -0.96
CLIP1-201ENST00000302528 LYZL2Q7Z4W2 148 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 TEX29Q8N6K0 151 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 ZG16BQ96DA0 208 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 SLIRPQ9GZT3 109 aaKnown RBP9.08□□□□□ -0.96
CLIP1-201ENST00000302528 TBX21Q9UL17 535 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 R4GN57 208 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 LOXHD1Q8IVV2 1947 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 NRAPQ86VF7 1730 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 C17orf51A8MQB3 221 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 OR2A4O95047 310 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 CDS2O95674 445 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 MDKP21741 143 aaPredicted RBP9.08□□□□□ -0.96
CLIP1-201ENST00000302528 TMEM50BP56557 158 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 PSG6Q00889 435 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 PLPPR5Q32ZL2 321 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 ZNF658BQ4V348 819 aaPredicted RBP9.08□□□□□ -0.96
CLIP1-201ENST00000302528 PAPPA-AS1Q5QFB9 102 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 ZNF324BQ6AW86 544 aaPredicted RBP9.08□□□□□ -0.96
CLIP1-201ENST00000302528 C17orf47Q8NEP4 570 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 OR2A7Q96R45 310 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 PRSS27Q9BQR3 290 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 ALKBH7Q9BT30 221 aaPredicted RBP9.08□□□□□ -0.96
CLIP1-201ENST00000302528 JKAMPQ9P055 326 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 LAMB2P55268 1798 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 LINC01565O15544 149 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 NSUN5P2Q63ZY6 315 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 CADM4Q8NFZ8 388 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 OR10S1Q8NGN2 331 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 C10orf35Q96D05 121 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 OPN4Q9UHM6 478 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 NEU3Q9UQ49 428 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms