RNA–Protein interactions for RNA: ENST00000302445.7

KARS-201, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best) BASIC

Gene KARS, Length 2,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-201ENST00000302445 KIAA1549Q9HCM3 1950 aa11.82□□□□□ -0.52
KARS-201ENST00000302445 TRAV9-1A0A075B6T8 112 aa11.82□□□□□ -0.52
KARS-201ENST00000302445 ZFAND5O76080 213 aa11.82□□□□□ -0.52
KARS-201ENST00000302445 PPP1CBP62140 327 aa11.82□□□□□ -0.52
KARS-201ENST00000302445 MRPS11P82912 194 aaKnown RBP11.82□□□□□ -0.52
KARS-201ENST00000302445 LMX1AQ8TE12 382 aa11.82□□□□□ -0.52
KARS-201ENST00000302445 RPUSD4Q96CM3 377 aaKnown RBP11.82□□□□□ -0.52
KARS-201ENST00000302445 NEIL1Q96FI4 390 aaPredicted RBP11.82□□□□□ -0.52
KARS-201ENST00000302445 ELOVL1Q9BW60 279 aa11.82□□□□□ -0.52
KARS-201ENST00000302445 IGHV3-20A0A0C4DH32 117 aa11.81□□□□□ -0.52
KARS-201ENST00000302445 A0A0G2JRQ6 117 aa11.81□□□□□ -0.52
KARS-201ENST00000302445 CD300LBA8K4G0 201 aa11.81□□□□□ -0.52
KARS-201ENST00000302445 NPIPB11E5RHQ5 1161 aa11.81□□□□□ -0.52
KARS-201ENST00000302445 H3BP45 60 aa11.81□□□□□ -0.52
KARS-201ENST00000302445 DNPH1O43598 174 aa11.81□□□□□ -0.52
KARS-201ENST00000302445 LCATP04180 440 aa11.81□□□□□ -0.52
KARS-201ENST00000302445 MMP7P09237 267 aaPredicted RBP11.81□□□□□ -0.52
KARS-201ENST00000302445 FGF12P61328 243 aa11.81□□□□□ -0.52
KARS-201ENST00000302445 TMEM183BQ1AE95 376 aa11.81□□□□□ -0.52
KARS-201ENST00000302445 TMEM249Q2WGJ8 235 aa11.81□□□□□ -0.52
KARS-201ENST00000302445 PLCXD3Q63HM9 321 aa11.81□□□□□ -0.52
KARS-201ENST00000302445 HAPLN4Q86UW8 402 aa11.81□□□□□ -0.52
KARS-201ENST00000302445 RPP25LQ8N5L8 163 aaKnown RBP11.81□□□□□ -0.52
KARS-201ENST00000302445 ZNF611Q8N823 705 aa11.81□□□□□ -0.52
KARS-201ENST00000302445 SPSB4Q96A44 273 aa11.81□□□□□ -0.52
KARS-201ENST00000302445 SF3B5Q9BWJ5 86 aaKnown RBP11.81□□□□□ -0.52
KARS-201ENST00000302445 GPR35Q9HC97 309 aa11.81□□□□□ -0.52
KARS-201ENST00000302445 OR2W1Q9Y3N9 320 aa11.81□□□□□ -0.52
KARS-201ENST00000302445 YPEL1O60688 119 aa11.81□□□□□ -0.52
KARS-201ENST00000302445 DKK1O94907 266 aa11.81□□□□□ -0.52
KARS-201ENST00000302445 SERPINA7P05543 415 aa11.81□□□□□ -0.52
KARS-201ENST00000302445 SCTP09683 121 aa11.81□□□□□ -0.52
KARS-201ENST00000302445 IL3RAP26951 378 aa11.81□□□□□ -0.52
KARS-201ENST00000302445 RPL29P47914 159 aaKnown RBP11.81□□□□□ -0.52
KARS-201ENST00000302445 YPEL3P61236 119 aaPredicted RBP11.81□□□□□ -0.52
KARS-201ENST00000302445 SELENOTP62341 195 aa11.81□□□□□ -0.52
KARS-201ENST00000302445 ARL16Q0P5N6 197 aa11.81□□□□□ -0.52
KARS-201ENST00000302445 FBXO46Q6PJ61 603 aaPredicted RBP11.81□□□□□ -0.52
KARS-201ENST00000302445 C7orf61Q8IZ16 206 aa11.81□□□□□ -0.52
KARS-201ENST00000302445 OR10G3Q8NGC4 313 aa11.81□□□□□ -0.52
KARS-201ENST00000302445 THAP3Q8WTV1 239 aaPredicted RBP11.81□□□□□ -0.52
KARS-201ENST00000302445 ZNF501Q96CX3 271 aaPredicted RBP11.81□□□□□ -0.52
KARS-201ENST00000302445 YPEL2Q96QA6 119 aa11.81□□□□□ -0.52
KARS-201ENST00000302445 UBE2ZQ9H832 354 aaPredicted RBP11.81□□□□□ -0.52
KARS-201ENST00000302445 TMEM106BQ9NUM4 274 aa11.81□□□□□ -0.52
KARS-201ENST00000302445 TRAPPC1Q9Y5R8 145 aa11.81□□□□□ -0.52
KARS-201ENST00000302445 CCDC163A0A0D9SF12 145 aa11.8□□□□□ -0.52
KARS-201ENST00000302445 TNFSF11O14788 317 aa11.8□□□□□ -0.52
KARS-201ENST00000302445 DUX1O43812 170 aa11.8□□□□□ -0.52
KARS-201ENST00000302445 SOX15O60248 233 aa11.8□□□□□ -0.52
KARS-201ENST00000302445 BRS3P32247 399 aa11.8□□□□□ -0.52
KARS-201ENST00000302445 TPPP2P59282 170 aa11.8□□□□□ -0.52
KARS-201ENST00000302445 RABEPKQ7Z6M1 372 aa11.8□□□□□ -0.52
KARS-201ENST00000302445 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.8□□□□□ -0.52
KARS-201ENST00000302445 AGBL5Q8NDL9 886 aa11.8□□□□□ -0.52
KARS-201ENST00000302445 SPACA9Q96E40 222 aaPredicted RBP11.8□□□□□ -0.52
KARS-201ENST00000302445 ZNF385AQ96PM9 386 aaKnown RBP11.8□□□□□ -0.52
KARS-201ENST00000302445 OR4C12Q96R67 309 aa11.8□□□□□ -0.52
KARS-201ENST00000302445 TBX15Q96SF7 602 aa11.8□□□□□ -0.52
KARS-201ENST00000302445 LMO7DNF2Z398 122 aa11.79□□□□□ -0.52
KARS-201ENST00000302445 PDE6DO43924 150 aa11.79□□□□□ -0.52
KARS-201ENST00000302445 PDGFBP01127 241 aaPredicted RBP11.79□□□□□ -0.52
KARS-201ENST00000302445 OPN1LWP04000 364 aa11.79□□□□□ -0.52
KARS-201ENST00000302445 JMJD7P0C870 316 aa11.79□□□□□ -0.52
KARS-201ENST00000302445 PCSK4Q6UW60 755 aa11.79□□□□□ -0.52
KARS-201ENST00000302445 TMEM14EPQ6UXP3 125 aa11.79□□□□□ -0.52
KARS-201ENST00000302445 GMPPAQ96IJ6 420 aaPredicted RBP11.79□□□□□ -0.52
KARS-201ENST00000302445 TXNDC17Q9BRA2 123 aa11.79□□□□□ -0.52
KARS-201ENST00000302445 LPAR2Q9HBW0 351 aa11.79□□□□□ -0.52
KARS-201ENST00000302445 CACNG5Q9UF02 275 aa11.79□□□□□ -0.52
KARS-201ENST00000302445 IL17BQ9UHF5 180 aa11.79□□□□□ -0.52
KARS-201ENST00000302445 KIAA0100Q14667 2235 aaKnown RBP11.79□□□□□ -0.52
KARS-201ENST00000302445 IGHV1OR21-1A0A087WYE8 117 aa11.79□□□□□ -0.52
KARS-201ENST00000302445 HS3ST1O14792 307 aa11.79□□□□□ -0.52
KARS-201ENST00000302445 DEGS1O15121 323 aa11.79□□□□□ -0.52
KARS-201ENST00000302445 NXPH3O95157 252 aa11.79□□□□□ -0.52
KARS-201ENST00000302445 CYC1P08574 325 aa11.79□□□□□ -0.52
KARS-201ENST00000302445 IL6RP08887 468 aaPredicted RBP11.79□□□□□ -0.52
KARS-201ENST00000302445 NPSP0C0P6 89 aa11.79□□□□□ -0.52
KARS-201ENST00000302445 SOX8P57073 446 aa11.79□□□□□ -0.52
KARS-201ENST00000302445 PCBD1P61457 104 aa11.79□□□□□ -0.52
KARS-201ENST00000302445 SLC38A11Q08AI6 406 aa11.79□□□□□ -0.52
KARS-201ENST00000302445 CDCP2Q5VXM1 449 aa11.79□□□□□ -0.52
KARS-201ENST00000302445 ZNF324BQ6AW86 544 aaPredicted RBP11.79□□□□□ -0.52
KARS-201ENST00000302445 ZNF705AQ6ZN79 300 aaPredicted RBP11.79□□□□□ -0.52
KARS-201ENST00000302445 CALHM1Q8IU99 346 aa11.79□□□□□ -0.52
KARS-201ENST00000302445 OR4F5Q8NH21 305 aa11.79□□□□□ -0.52
KARS-201ENST00000302445 CMTM2Q8TAZ6 248 aa11.79□□□□□ -0.52
KARS-201ENST00000302445 CPT1CQ8TCG5 803 aa11.79□□□□□ -0.52
KARS-201ENST00000302445 BADQ92934 168 aa11.79□□□□□ -0.52
KARS-201ENST00000302445 OR4F4Q96R69 305 aa11.79□□□□□ -0.52
KARS-201ENST00000302445 MTIF3Q9H2K0 278 aaKnown RBP11.79□□□□□ -0.52
KARS-201ENST00000302445 LIN7CQ9NUP9 197 aaKnown RBP11.79□□□□□ -0.52
KARS-201ENST00000302445 TMEM38BQ9NVV0 291 aa11.79□□□□□ -0.52
KARS-201ENST00000302445 RANBP2P49792 3224 aaKnown RBP11.79□□□□□ -0.52
KARS-201ENST00000302445 CHD3Q12873 2000 aaKnown RBP11.79□□□□□ -0.52
KARS-201ENST00000302445 IGKV1-6A0A0C4DH72 117 aa11.78□□□□□ -0.52
KARS-201ENST00000302445 ZNF705FA8MVS1 300 aaPredicted RBP11.78□□□□□ -0.52
KARS-201ENST00000302445 UMODP07911 640 aa11.78□□□□□ -0.52
KARS-201ENST00000302445 ZNF705DP0CH99 300 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms