RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 MZT1Q08AG7 82 aa17.89■□□□□ 0.45
SOX17-201ENST00000297316 TMEM268Q5VZI3 342 aa17.89■□□□□ 0.45
SOX17-201ENST00000297316 FIP1L1Q6UN15 594 aaKnown RBP17.89■□□□□ 0.45
SOX17-201ENST00000297316 FAM185AQ8N0U4 392 aa17.89■□□□□ 0.45
SOX17-201ENST00000297316 OR52M1Q8NGK5 317 aa17.89■□□□□ 0.45
SOX17-201ENST00000297316 TMEM222Q9H0R3 208 aa17.89■□□□□ 0.45
SOX17-201ENST00000297316 GLS2Q9UI32 602 aa17.89■□□□□ 0.45
SOX17-201ENST00000297316 WIPI2Q9Y4P8 454 aa17.89■□□□□ 0.45
SOX17-201ENST00000297316 ANKHD1Q8IWZ3 2542 aaKnown RBP17.89■□□□□ 0.45
SOX17-201ENST00000297316 SPTBN1Q01082 2364 aaKnown RBP17.88■□□□□ 0.45
SOX17-201ENST00000297316 MOB1BQ7L9L4 216 aa17.88■□□□□ 0.45
SOX17-201ENST00000297316 DMRTC2Q8IXT2 367 aaPredicted RBP17.88■□□□□ 0.45
SOX17-201ENST00000297316 CD177Q8N6Q3 437 aa17.88■□□□□ 0.45
SOX17-201ENST00000297316 AQP10Q96PS8 301 aa17.88■□□□□ 0.45
SOX17-201ENST00000297316 LSM5Q9Y4Y9 91 aaKnown RBP17.88■□□□□ 0.45
SOX17-201ENST00000297316 MEX3AA1L020 520 aaKnown RBP17.88■□□□□ 0.45
SOX17-201ENST00000297316 SRRM5B3KS81 715 aa17.88■□□□□ 0.45
SOX17-201ENST00000297316 SHISA9B4DS77 424 aa17.88■□□□□ 0.45
SOX17-201ENST00000297316 MBPP02686 304 aaPredicted RBP17.88■□□□□ 0.45
SOX17-201ENST00000297316 TNFAIP6P98066 277 aaPredicted RBP17.88■□□□□ 0.45
SOX17-201ENST00000297316 COL10A1Q03692 680 aa17.88■□□□□ 0.45
SOX17-201ENST00000297316 ZNF273Q14593 569 aa17.88■□□□□ 0.45
SOX17-201ENST00000297316 TESK1Q15569 626 aa17.88■□□□□ 0.45
SOX17-201ENST00000297316 HMGN3Q15651 99 aa17.88■□□□□ 0.45
SOX17-201ENST00000297316 SMIM21Q3B7S5 101 aa17.88■□□□□ 0.45
SOX17-201ENST00000297316 LILRB1Q8NHL6 650 aaPredicted RBP17.88■□□□□ 0.45
SOX17-201ENST00000297316 COQ2Q96H96 371 aa17.88■□□□□ 0.45
SOX17-201ENST00000297316 TAF9BQ9HBM6 251 aa17.88■□□□□ 0.45
SOX17-201ENST00000297316 AESQ08117 197 aa17.87■□□□□ 0.45
SOX17-201ENST00000297316 NCMAPQ5T1S8 102 aa17.87■□□□□ 0.45
SOX17-201ENST00000297316 FAM53AQ6NSI3 398 aaPredicted RBP17.87■□□□□ 0.45
SOX17-201ENST00000297316 PRELID1Q9Y255 219 aa17.87■□□□□ 0.45
SOX17-201ENST00000297316 LRBAP50851 2863 aa17.87■□□□□ 0.45
SOX17-201ENST00000297316 NPIPB11E5RHQ5 1161 aa17.87■□□□□ 0.45
SOX17-201ENST00000297316 NUPL2O15504 423 aaKnown RBP17.87■□□□□ 0.45
SOX17-201ENST00000297316 PGLYRP1O75594 196 aaPredicted RBP17.87■□□□□ 0.45
SOX17-201ENST00000297316 DEDDO75618 318 aa17.87■□□□□ 0.45
SOX17-201ENST00000297316 IGLV2-14P01704 120 aa17.87■□□□□ 0.45
SOX17-201ENST00000297316 TPRX1Q8N7U7 411 aa17.87■□□□□ 0.45
SOX17-201ENST00000297316 RNASE6Q93091 150 aaKnown RBP17.87■□□□□ 0.45
SOX17-201ENST00000297316 BARX1Q9HBU1 254 aaPredicted RBP17.87■□□□□ 0.45
SOX17-201ENST00000297316 ABCA4P78363 2273 aa17.87■□□□□ 0.45
SOX17-201ENST00000297316 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.86■□□□□ 0.45
SOX17-201ENST00000297316 A0A1B0GW55 424 aa17.86■□□□□ 0.45
SOX17-201ENST00000297316 PLAUP00749 431 aa17.86■□□□□ 0.45
SOX17-201ENST00000297316 APOC3P02656 99 aa17.86■□□□□ 0.45
SOX17-201ENST00000297316 DUX4L2P0CJ85 424 aa17.86■□□□□ 0.45
SOX17-201ENST00000297316 DUX4L3P0CJ86 424 aa17.86■□□□□ 0.45
SOX17-201ENST00000297316 DUX4L4P0CJ87 422 aa17.86■□□□□ 0.45
SOX17-201ENST00000297316 DUX4L5P0CJ88 424 aa17.86■□□□□ 0.45
SOX17-201ENST00000297316 DUX4L6P0CJ89 424 aa17.86■□□□□ 0.45
SOX17-201ENST00000297316 DUX4L7P0CJ90 424 aa17.86■□□□□ 0.45
SOX17-201ENST00000297316 PET100P0DJ07 73 aa17.86■□□□□ 0.45
SOX17-201ENST00000297316 HKR1P10072 659 aa17.86■□□□□ 0.45
SOX17-201ENST00000297316 PSG2P11465 335 aa17.86■□□□□ 0.45
SOX17-201ENST00000297316 OR3A1P47881 315 aa17.86■□□□□ 0.45
SOX17-201ENST00000297316 CCL8P80075 99 aa17.86■□□□□ 0.45
SOX17-201ENST00000297316 FBXL19-AS1Q494R0 122 aa17.86■□□□□ 0.45
SOX17-201ENST00000297316 CA5BP1Q8WTZ4 195 aa17.86■□□□□ 0.45
SOX17-201ENST00000297316 GCM1Q9NP62 436 aa17.86■□□□□ 0.45
SOX17-201ENST00000297316 DCAF16Q9NXF7 216 aa17.86■□□□□ 0.45
SOX17-201ENST00000297316 DUX4Q9UBX2 424 aa17.86■□□□□ 0.45
SOX17-201ENST00000297316 UBE2J1Q9Y385 318 aaPredicted RBP17.86■□□□□ 0.45
SOX17-201ENST00000297316 RAI1Q7Z5J4 1906 aaPredicted RBP17.86■□□□□ 0.45
SOX17-201ENST00000297316 IGKV1D-17A0A075B6S4 117 aa17.86■□□□□ 0.45
SOX17-201ENST00000297316 TMEM8BA6NDV4 472 aa17.86■□□□□ 0.45
SOX17-201ENST00000297316 E7EQL1 145 aa17.86■□□□□ 0.45
SOX17-201ENST00000297316 IQCF2Q8IXL9 164 aa17.86■□□□□ 0.45
SOX17-201ENST00000297316 SELENOHQ8IZQ5 122 aaKnown RBP17.86■□□□□ 0.45
SOX17-201ENST00000297316 PRR7Q8TB68 274 aa17.86■□□□□ 0.45
SOX17-201ENST00000297316 TMEM56Q96MV1 263 aa17.86■□□□□ 0.45
SOX17-201ENST00000297316 FBXO9Q9UK97 447 aaPredicted RBP17.86■□□□□ 0.45
SOX17-201ENST00000297316 TMEM56-RWDD3S4R434 201 aa17.86■□□□□ 0.45
SOX17-201ENST00000297316 IGSF10Q6WRI0 2623 aa17.85■□□□□ 0.45
SOX17-201ENST00000297316 ARFGEF3Q5TH69 2177 aa17.85■□□□□ 0.45
SOX17-201ENST00000297316 K7EPK0 472 aa17.85■□□□□ 0.45
SOX17-201ENST00000297316 SIGLEC5O15389 551 aa17.85■□□□□ 0.45
SOX17-201ENST00000297316 SIAH2O43255 324 aa17.85■□□□□ 0.45
SOX17-201ENST00000297316 UQCRFS1P47985 274 aa17.85■□□□□ 0.45
SOX17-201ENST00000297316 ATRAIDQ6UW56 229 aa17.85■□□□□ 0.45
SOX17-201ENST00000297316 FAM71E2Q8N5Q1 922 aa17.85■□□□□ 0.45
SOX17-201ENST00000297316 OR10V1Q8NGI7 309 aa17.85■□□□□ 0.45
SOX17-201ENST00000297316 OR1L1Q8NH94 360 aa17.85■□□□□ 0.45
SOX17-201ENST00000297316 ESRP2Q9H6T0 727 aaKnown RBP17.85■□□□□ 0.45
SOX17-201ENST00000297316 NGBQ9NPG2 151 aa17.85■□□□□ 0.45
SOX17-201ENST00000297316 DNAJB11Q9UBS4 358 aa17.85■□□□□ 0.45
SOX17-201ENST00000297316 TMEM30CPA0ZSE6 113 aa17.84■□□□□ 0.45
SOX17-201ENST00000297316 CYB5R3P00387 301 aaPredicted RBP17.84■□□□□ 0.45
SOX17-201ENST00000297316 PRDX2P32119 198 aa17.84■□□□□ 0.45
SOX17-201ENST00000297316 CD80P33681 288 aa17.84■□□□□ 0.45
SOX17-201ENST00000297316 DNTTIP1Q9H147 329 aa17.84■□□□□ 0.45
SOX17-201ENST00000297316 IL19Q9UHD0 177 aa17.84■□□□□ 0.45
SOX17-201ENST00000297316 C12orf77C9JDV5 145 aa17.84■□□□□ 0.45
SOX17-201ENST00000297316 LHBP01229 141 aa17.84■□□□□ 0.45
SOX17-201ENST00000297316 SSX8Q7RTT4 187 aa17.84■□□□□ 0.45
SOX17-201ENST00000297316 OR10Z1Q8NGY1 313 aa17.84■□□□□ 0.45
SOX17-201ENST00000297316 TAS2R3Q9NYW6 316 aa17.84■□□□□ 0.45
SOX17-201ENST00000297316 CFAP46Q8IYW2 2715 aa17.84■□□□□ 0.45
SOX17-201ENST00000297316 HCFC1P51610 2035 aa17.84■□□□□ 0.45
SOX17-201ENST00000297316 HEXAP06865 529 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms