RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 FAM74A7A6NL05 159 aa9.21□□□□□ -0.94
GGPS1-201ENST00000282841 DEFB108AA8MXU0 73 aa9.21□□□□□ -0.94
GGPS1-201ENST00000282841 HSD17B6O14756 317 aa9.21□□□□□ -0.94
GGPS1-201ENST00000282841 OMGP23515 440 aa9.21□□□□□ -0.94
GGPS1-201ENST00000282841 PIGPP57054 158 aa9.21□□□□□ -0.94
GGPS1-201ENST00000282841 ZNF146Q15072 292 aa9.21□□□□□ -0.94
GGPS1-201ENST00000282841 FAM74A3Q4VXF1 159 aa9.21□□□□□ -0.94
GGPS1-201ENST00000282841 ACTBL2Q562R1 376 aa9.21□□□□□ -0.94
GGPS1-201ENST00000282841 SESN1Q9Y6P5 492 aa9.21□□□□□ -0.94
GGPS1-201ENST00000282841 TEX13DA0A0J9YY54 714 aaPredicted RBP9.2□□□□□ -0.94
GGPS1-201ENST00000282841 IFNA4P05014 189 aa9.2□□□□□ -0.94
GGPS1-201ENST00000282841 ZNF728P0DKX0 622 aa9.2□□□□□ -0.94
GGPS1-201ENST00000282841 SSTR5P35346 364 aa9.2□□□□□ -0.94
GGPS1-201ENST00000282841 SERPINF1P36955 418 aa9.2□□□□□ -0.94
GGPS1-201ENST00000282841 KCNJ3P48549 501 aa9.2□□□□□ -0.94
GGPS1-201ENST00000282841 ERVFRD-1P60508 538 aa9.2□□□□□ -0.94
GGPS1-201ENST00000282841 SORDQ00796 357 aa9.2□□□□□ -0.94
GGPS1-201ENST00000282841 FGL1Q08830 312 aa9.2□□□□□ -0.94
GGPS1-201ENST00000282841 ATRAIDQ6UW56 229 aa9.2□□□□□ -0.94
GGPS1-201ENST00000282841 ZDHHC22Q8N966 263 aa9.2□□□□□ -0.94
GGPS1-201ENST00000282841 OR1L1Q8NH94 360 aa9.2□□□□□ -0.94
GGPS1-201ENST00000282841 CCL17Q92583 94 aa9.2□□□□□ -0.94
GGPS1-201ENST00000282841 COQ2Q96H96 371 aa9.2□□□□□ -0.94
GGPS1-201ENST00000282841 PDCD10Q9BUL8 212 aa9.2□□□□□ -0.94
GGPS1-201ENST00000282841 KCNJ16Q9NPI9 418 aa9.2□□□□□ -0.94
GGPS1-201ENST00000282841 RNF150Q9ULK6 438 aa9.2□□□□□ -0.94
GGPS1-201ENST00000282841 RPS10-NUDT3A0A1W2PQS6 291 aa9.2□□□□□ -0.94
GGPS1-201ENST00000282841 TRDCB7Z8K6 153 aa9.2□□□□□ -0.94
GGPS1-201ENST00000282841 DNASE2O00115 360 aaPredicted RBP9.2□□□□□ -0.94
GGPS1-201ENST00000282841 CA11O75493 328 aa9.2□□□□□ -0.94
GGPS1-201ENST00000282841 PPYP01298 95 aa9.2□□□□□ -0.94
GGPS1-201ENST00000282841 FPR2P25090 351 aa9.2□□□□□ -0.94
GGPS1-201ENST00000282841 PRDX2P32119 198 aa9.2□□□□□ -0.94
GGPS1-201ENST00000282841 IL13RA2Q14627 380 aa9.2□□□□□ -0.94
GGPS1-201ENST00000282841 UTF1Q5T230 341 aa9.2□□□□□ -0.94
GGPS1-201ENST00000282841 FOXRED2Q8IWF2 684 aa9.2□□□□□ -0.94
GGPS1-201ENST00000282841 CNTNAP3BQ96NU0 1288 aa9.2□□□□□ -0.94
GGPS1-201ENST00000282841 CNTNAP3Q9BZ76 1288 aa9.2□□□□□ -0.94
GGPS1-201ENST00000282841 TAF9BQ9HBM6 251 aa9.2□□□□□ -0.94
GGPS1-201ENST00000282841 HES4Q9HCC6 221 aa9.2□□□□□ -0.94
GGPS1-201ENST00000282841 GAB2Q9UQC2 676 aa9.2□□□□□ -0.94
GGPS1-201ENST00000282841 PPP1R3CQ9UQK1 317 aa9.2□□□□□ -0.94
GGPS1-201ENST00000282841 FXYD6-FXYD2A0A087WZ82 144 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 C5orf51A6NDU8 294 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 FAM90A10PA6NDY2 464 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 FAM90A18PA6NE21 464 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 FAM90A16PA6NEW6 464 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 FAM90A20PA6NIJ5 464 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 FAM90A8PA6NJQ4 464 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 FAM90A7PA6NKC0 464 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 FAM90A22PA8MWA6 464 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 FAM90A12PA8MX19 464 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 FAM90A5PA8MXJ8 464 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 FAM90A23PA8MXZ1 464 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 GYPAP02724 150 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 FAM90A15PP0C7V4 464 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 FAM90A13PP0C7W8 464 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 FAM90A14PP0C7W9 464 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 FAM90A24PP0C7X0 464 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 TMEM128Q5BJH2 165 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 Q8IYB0 196 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 CCL28Q9NRJ3 127 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 CISD1Q9NZ45 108 aaKnown RBP9.19□□□□□ -0.94
GGPS1-201ENST00000282841 NDRG3Q9UGV2 375 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 C14orf166Q9Y224 244 aaKnown RBP9.19□□□□□ -0.94
GGPS1-201ENST00000282841 WIPI2Q9Y4P8 454 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 HSPA12AO43301 675 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 OR3A1P47881 315 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 EDDM3BP56851 147 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 RPS23P62266 143 aaKnown RBP9.19□□□□□ -0.94
GGPS1-201ENST00000282841 RBM39Q14498 530 aaKnown RBP9.19□□□□□ -0.94
GGPS1-201ENST00000282841 GNMTQ14749 295 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 SMIM21Q3B7S5 101 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 ABCA11PQ4W5N1 156 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 BEX5Q5H9J7 111 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 NCMAPQ5T1S8 102 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 DHRS11Q6UWP2 260 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 ZNF497Q6ZNH5 498 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 PEG10Q86TG7 708 aaKnown RBP9.19□□□□□ -0.94
GGPS1-201ENST00000282841 OR10V1Q8NGI7 309 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 RNASE6Q93091 150 aaKnown RBP9.19□□□□□ -0.94
GGPS1-201ENST00000282841 BBC3Q96PG8 261 aaPredicted RBP9.19□□□□□ -0.94
GGPS1-201ENST00000282841 CCL13Q99616 98 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 TLNRD1Q9H1K6 362 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 OPN4Q9UHM6 478 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 DOPEY1Q5JWR5 2465 aa9.19□□□□□ -0.94
GGPS1-201ENST00000282841 TK1P04183 234 aa9.18□□□□□ -0.94
GGPS1-201ENST00000282841 GLP1RP43220 463 aa9.18□□□□□ -0.94
GGPS1-201ENST00000282841 LINC00205P59089 165 aa9.18□□□□□ -0.94
GGPS1-201ENST00000282841 RAB4BP61018 213 aa9.18□□□□□ -0.94
GGPS1-201ENST00000282841 HERV-K104P61576 105 aa9.18□□□□□ -0.94
GGPS1-201ENST00000282841 MEX3BQ6ZN04 569 aaKnown RBP9.18□□□□□ -0.94
GGPS1-201ENST00000282841 ZNF818PQ6ZRF7 136 aa9.18□□□□□ -0.94
GGPS1-201ENST00000282841 FAM90A1Q86YD7 464 aa9.18□□□□□ -0.94
GGPS1-201ENST00000282841 TGIF2LXQ8IUE1 241 aa9.18□□□□□ -0.94
GGPS1-201ENST00000282841 ZFP82Q8N141 532 aa9.18□□□□□ -0.94
GGPS1-201ENST00000282841 C9orf62Q8N4C0 152 aa9.18□□□□□ -0.94
GGPS1-201ENST00000282841 FAM216BQ8N7L0 139 aa9.18□□□□□ -0.94
GGPS1-201ENST00000282841 NUP37Q8NFH4 326 aa9.18□□□□□ -0.94
GGPS1-201ENST00000282841 OR52L2PQ8NGH6 319 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms