RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 KCNK15Q9H427 330 aa10.25□□□□□ -0.77
CLNS1A-201ENST00000263309 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.25□□□□□ -0.77
CLNS1A-201ENST00000263309 CSPG4Q6UVK1 2322 aa10.25□□□□□ -0.77
CLNS1A-201ENST00000263309 HIVEP2P31629 2446 aa10.25□□□□□ -0.77
CLNS1A-201ENST00000263309 A0A087X0M5 115 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 A0A0B4J203 849 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 A0A0U1RQK1 487 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 A0A1B0GX30 115 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 C12orf77C9JDV5 145 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 RAB27BO00194 218 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 F2RL2O00254 374 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 YPEL1O60688 119 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 FCN3O75636 299 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 TPPPO94811 219 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 DIRAS3O95661 229 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 RCC1P18754 421 aaPredicted RBP10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 SSTR5P35346 364 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 CEACAM6P40199 344 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 OR3A3P47888 321 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 GNG10P50151 68 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 EFNB2P52799 333 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 TMEM50BP56557 158 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 RPL15P61313 204 aaKnown RBP10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 CBX3Q13185 183 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 KLRD1Q13241 179 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 SSX2Q16385 188 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 C17orf58Q2M2W7 97 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 LRRC75BQ2VPJ9 315 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 DEFB112Q30KQ8 113 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 RUSC1-AS1Q66K80 236 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 PRIMA1Q86XR5 153 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 FAM216AQ8WUB2 273 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 BORCS5Q969J3 196 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 TOMM40LQ969M1 308 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 YPEL2Q96QA6 119 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 MDFIQ99750 246 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 MEGF9Q9H1U4 602 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 Q9N2K0 584 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 GFOD1Q9NXC2 390 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 PIPOXQ9P0Z9 390 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 ZNF221Q9UK13 617 aa10.24□□□□□ -0.77
CLNS1A-201ENST00000263309 TLN2Q9Y4G6 2542 aa10.23□□□□□ -0.77
CLNS1A-201ENST00000263309 TRAV39A0A0B4J263 110 aa10.23□□□□□ -0.77
CLNS1A-201ENST00000263309 BUB1B-PAK6H3BSN5 160 aa10.23□□□□□ -0.77
CLNS1A-201ENST00000263309 CLDN34H7C241 214 aa10.23□□□□□ -0.77
CLNS1A-201ENST00000263309 SLC22A5O76082 557 aa10.23□□□□□ -0.77
CLNS1A-201ENST00000263309 NAPSAO96009 420 aa10.23□□□□□ -0.77
CLNS1A-201ENST00000263309 CGB3P0DN86 165 aa10.23□□□□□ -0.77
CLNS1A-201ENST00000263309 CGB7P0DN87 165 aa10.23□□□□□ -0.77
CLNS1A-201ENST00000263309 ACTG1P63261 375 aa10.23□□□□□ -0.77
CLNS1A-201ENST00000263309 HLA-DRB3P79483 266 aa10.23□□□□□ -0.77
CLNS1A-201ENST00000263309 HLA-DRB5Q30154 266 aa10.23□□□□□ -0.77
CLNS1A-201ENST00000263309 PLA1AQ53H76 456 aa10.23□□□□□ -0.77
CLNS1A-201ENST00000263309 ARSJQ5FYB0 599 aaPredicted RBP10.23□□□□□ -0.77
CLNS1A-201ENST00000263309 LY6G6FQ5SQ64 297 aa10.23□□□□□ -0.77
CLNS1A-201ENST00000263309 C16orf87Q6PH81 154 aa10.23□□□□□ -0.77
CLNS1A-201ENST00000263309 NR2C2APQ86WQ0 139 aa10.23□□□□□ -0.77
CLNS1A-201ENST00000263309 C11orf42Q8N5U0 333 aa10.23□□□□□ -0.77
CLNS1A-201ENST00000263309 DYRK2Q92630 601 aa10.23□□□□□ -0.77
CLNS1A-201ENST00000263309 SSX3Q99909 188 aa10.23□□□□□ -0.77
CLNS1A-201ENST00000263309 C6orf62Q9GZU0 229 aaPredicted RBP10.23□□□□□ -0.77
CLNS1A-201ENST00000263309 SLC23A1Q9UHI7 598 aa10.23□□□□□ -0.77
CLNS1A-201ENST00000263309 PSG11Q9UQ72 335 aa10.23□□□□□ -0.77
CLNS1A-201ENST00000263309 HILPDAQ9Y5L2 63 aa10.23□□□□□ -0.77
CLNS1A-201ENST00000263309 ZANQ9Y493 2812 aa10.22□□□□□ -0.77
CLNS1A-201ENST00000263309 FBN1P35555 2871 aaKnown RBP10.22□□□□□ -0.77
CLNS1A-201ENST00000263309 A0A0A6YYD4 124 aa10.22□□□□□ -0.77
CLNS1A-201ENST00000263309 MFNGO00587 321 aa10.22□□□□□ -0.77
CLNS1A-201ENST00000263309 RAB29O14966 203 aa10.22□□□□□ -0.77
CLNS1A-201ENST00000263309 BET1O15155 118 aa10.22□□□□□ -0.77
CLNS1A-201ENST00000263309 FABP7O15540 132 aa10.22□□□□□ -0.77
CLNS1A-201ENST00000263309 HOXA3O43365 443 aaPredicted RBP10.22□□□□□ -0.77
CLNS1A-201ENST00000263309 S100GP29377 79 aa10.22□□□□□ -0.77
CLNS1A-201ENST00000263309 MRPS10P82664 201 aaKnown RBP10.22□□□□□ -0.77
CLNS1A-201ENST00000263309 HMGN3Q15651 99 aa10.22□□□□□ -0.77
CLNS1A-201ENST00000263309 MORN2Q502X0 79 aa10.22□□□□□ -0.77
CLNS1A-201ENST00000263309 PLAC9Q5JTB6 97 aa10.22□□□□□ -0.77
CLNS1A-201ENST00000263309 CNIH2Q6PI25 160 aa10.22□□□□□ -0.77
CLNS1A-201ENST00000263309 LDLRAD3Q86YD5 345 aa10.22□□□□□ -0.77
CLNS1A-201ENST00000263309 OR8H3Q8N146 312 aa10.22□□□□□ -0.77
CLNS1A-201ENST00000263309 LYG1Q8N1E2 194 aa10.22□□□□□ -0.77
CLNS1A-201ENST00000263309 LINC00311Q8N616 119 aa10.22□□□□□ -0.77
CLNS1A-201ENST00000263309 OR5H6Q8NGV6 325 aa10.22□□□□□ -0.77
CLNS1A-201ENST00000263309 OR1L1Q8NH94 360 aa10.22□□□□□ -0.77
CLNS1A-201ENST00000263309 SCPEP1Q9HB40 452 aa10.22□□□□□ -0.77
CLNS1A-201ENST00000263309 NECAP2Q9NVZ3 263 aa10.22□□□□□ -0.77
CLNS1A-201ENST00000263309 TMEM235A6NFC5 223 aa10.21□□□□□ -0.77
CLNS1A-201ENST00000263309 C15orf65H3BRN8 121 aa10.21□□□□□ -0.77
CLNS1A-201ENST00000263309 SULT1C2O00338 296 aa10.21□□□□□ -0.77
CLNS1A-201ENST00000263309 PEX14O75381 377 aa10.21□□□□□ -0.77
CLNS1A-201ENST00000263309 RBBP9O75884 186 aa10.21□□□□□ -0.77
CLNS1A-201ENST00000263309 FCGR3AP08637 254 aa10.21□□□□□ -0.77
CLNS1A-201ENST00000263309 IER3P46695 156 aa10.21□□□□□ -0.77
CLNS1A-201ENST00000263309 TAS2R46P59540 309 aa10.21□□□□□ -0.77
CLNS1A-201ENST00000263309 HES1Q14469 280 aa10.21□□□□□ -0.77
CLNS1A-201ENST00000263309 ZNF846Q147U1 533 aa10.21□□□□□ -0.77
CLNS1A-201ENST00000263309 MOGAT2Q3SYC2 334 aa10.21□□□□□ -0.77
CLNS1A-201ENST00000263309 ZNF260Q3ZCT1 412 aa10.21□□□□□ -0.77
CLNS1A-201ENST00000263309 Q6ZS49 121 aa10.21□□□□□ -0.77
CLNS1A-201ENST00000263309 MOB3BQ86TA1 216 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms