RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 FAM90A15PP0C7V4 464 aa19.27■□□□□ 0.68
MCF2L-201ENST00000261963 FAM90A13PP0C7W8 464 aa19.27■□□□□ 0.68
MCF2L-201ENST00000261963 FAM90A14PP0C7W9 464 aa19.27■□□□□ 0.68
MCF2L-201ENST00000261963 FAM90A24PP0C7X0 464 aa19.27■□□□□ 0.68
MCF2L-201ENST00000261963 PLGLB1Q02325 96 aa19.27■□□□□ 0.68
MCF2L-201ENST00000261963 TNFRSF9Q07011 255 aa19.27■□□□□ 0.68
MCF2L-201ENST00000261963 CEACAM21Q3KPI0 293 aa19.27■□□□□ 0.68
MCF2L-201ENST00000261963 SP5Q6BEB4 398 aaPredicted RBP19.27■□□□□ 0.68
MCF2L-201ENST00000261963 LGI3Q8N145 548 aa19.27■□□□□ 0.68
MCF2L-201ENST00000261963 CLDND2Q8NHS1 167 aa19.27■□□□□ 0.68
MCF2L-201ENST00000261963 POM121L2Q96KW2 1035 aa19.27■□□□□ 0.68
MCF2L-201ENST00000261963 FAM24AA6NFZ4 105 aa19.27■□□□□ 0.68
MCF2L-201ENST00000261963 HERV-K104P61576 105 aa19.27■□□□□ 0.68
MCF2L-201ENST00000261963 ZDHHC23Q8IYP9 409 aa19.27■□□□□ 0.68
MCF2L-201ENST00000261963 MTCH1Q9NZJ7 389 aa19.27■□□□□ 0.68
MCF2L-201ENST00000261963 OR14J1Q9UGF5 321 aa19.27■□□□□ 0.68
MCF2L-201ENST00000261963 PITX3O75364 302 aa19.26■□□□□ 0.67
MCF2L-201ENST00000261963 CD200P41217 278 aa19.26■□□□□ 0.67
MCF2L-201ENST00000261963 FGF12P61328 243 aa19.26■□□□□ 0.67
MCF2L-201ENST00000261963 SLC10A1Q14973 349 aa19.26■□□□□ 0.67
MCF2L-201ENST00000261963 SAXO1Q8IYX7 474 aa19.26■□□□□ 0.67
MCF2L-201ENST00000261963 SYT3Q9BQG1 590 aa19.26■□□□□ 0.67
MCF2L-201ENST00000261963 PLSCR2Q9NRY7 297 aa19.26■□□□□ 0.67
MCF2L-201ENST00000261963 EREGO14944 169 aa19.26■□□□□ 0.67
MCF2L-201ENST00000261963 AMBPP02760 352 aa19.26■□□□□ 0.67
MCF2L-201ENST00000261963 MEOX1P50221 254 aa19.26■□□□□ 0.67
MCF2L-201ENST00000261963 Q6ZS49 121 aa19.26■□□□□ 0.67
MCF2L-201ENST00000261963 OR4D5Q8NGN0 318 aa19.26■□□□□ 0.67
MCF2L-201ENST00000261963 TP53RKQ96S44 253 aa19.26■□□□□ 0.67
MCF2L-201ENST00000261963 ZNF705GA8MUZ8 300 aaPredicted RBP19.25■□□□□ 0.67
MCF2L-201ENST00000261963 ZNF732B4DXR9 585 aa19.25■□□□□ 0.67
MCF2L-201ENST00000261963 PHF1O43189 567 aaPredicted RBP19.25■□□□□ 0.67
MCF2L-201ENST00000261963 NAPSAO96009 420 aa19.25■□□□□ 0.67
MCF2L-201ENST00000261963 NOVA1P51513 510 aaKnown RBP19.25■□□□□ 0.67
MCF2L-201ENST00000261963 ATG101Q9BSB4 218 aa19.25■□□□□ 0.67
MCF2L-201ENST00000261963 ZNF552Q9H707 407 aaPredicted RBP19.25■□□□□ 0.67
MCF2L-201ENST00000261963 CYB5R3P00387 301 aaPredicted RBP19.25■□□□□ 0.67
MCF2L-201ENST00000261963 SP1P08047 785 aa19.25■□□□□ 0.67
MCF2L-201ENST00000261963 PNRC1Q12796 327 aaPredicted RBP19.25■□□□□ 0.67
MCF2L-201ENST00000261963 CYB5R2Q6BCY4 276 aa19.25■□□□□ 0.67
MCF2L-201ENST00000261963 MDS2Q8NDY4 140 aa19.25■□□□□ 0.67
MCF2L-201ENST00000261963 OR10G4Q8NGN3 311 aa19.25■□□□□ 0.67
MCF2L-201ENST00000261963 CDH20Q9HBT6 801 aa19.25■□□□□ 0.67
MCF2L-201ENST00000261963 Q9N2K0 584 aa19.25■□□□□ 0.67
MCF2L-201ENST00000261963 TRBV24-1A0A075B6N3 115 aa19.24■□□□□ 0.67
MCF2L-201ENST00000261963 IGSF23A1L1A6 192 aa19.24■□□□□ 0.67
MCF2L-201ENST00000261963 M0R296 226 aa19.24■□□□□ 0.67
MCF2L-201ENST00000261963 HBE1P02100 147 aa19.24■□□□□ 0.67
MCF2L-201ENST00000261963 G0S2P27469 103 aa19.24■□□□□ 0.67
MCF2L-201ENST00000261963 APLNRP35414 380 aa19.24■□□□□ 0.67
MCF2L-201ENST00000261963 TLE4Q04727 773 aa19.24■□□□□ 0.67
MCF2L-201ENST00000261963 P4HA3Q7Z4N8 544 aa19.24■□□□□ 0.67
MCF2L-201ENST00000261963 DOCK7Q96N67 2140 aa19.24■□□□□ 0.67
MCF2L-201ENST00000261963 TNRC6AQ8NDV7 1962 aaKnown RBP19.24■□□□□ 0.67
MCF2L-201ENST00000261963 DFFBO76075 338 aa19.24■□□□□ 0.67
MCF2L-201ENST00000261963 OMGP23515 440 aa19.24■□□□□ 0.67
MCF2L-201ENST00000261963 GNRHRP30968 328 aa19.24■□□□□ 0.67
MCF2L-201ENST00000261963 ARR3P36575 388 aa19.24■□□□□ 0.67
MCF2L-201ENST00000261963 DHRS13Q6UX07 377 aa19.24■□□□□ 0.67
MCF2L-201ENST00000261963 CCDC71LQ8N9Z2 235 aa19.24■□□□□ 0.67
MCF2L-201ENST00000261963 GNPNAT1Q96EK6 184 aaPredicted RBP19.24■□□□□ 0.67
MCF2L-201ENST00000261963 A0A1B0GU03 582 aa19.23■□□□□ 0.67
MCF2L-201ENST00000261963 GCGP01275 180 aa19.23■□□□□ 0.67
MCF2L-201ENST00000261963 RNPS1Q15287 305 aaKnown RBP19.23■□□□□ 0.67
MCF2L-201ENST00000261963 SLC35G3Q8N808 338 aa19.23■□□□□ 0.67
MCF2L-201ENST00000261963 OR4X1Q8NH49 305 aa19.23■□□□□ 0.67
MCF2L-201ENST00000261963 CABLES2Q9BTV7 478 aa19.23■□□□□ 0.67
MCF2L-201ENST00000261963 PRSS50Q9UI38 385 aa19.23■□□□□ 0.67
MCF2L-201ENST00000261963 CD300LBA8K4G0 201 aa19.23■□□□□ 0.67
MCF2L-201ENST00000261963 MPPED1O15442 326 aa19.23■□□□□ 0.67
MCF2L-201ENST00000261963 SYNGR1O43759 233 aa19.23■□□□□ 0.67
MCF2L-201ENST00000261963 LILRA1O75019 489 aa19.23■□□□□ 0.67
MCF2L-201ENST00000261963 OPN1MWP04001 364 aa19.23■□□□□ 0.67
MCF2L-201ENST00000261963 SCTP09683 121 aa19.23■□□□□ 0.67
MCF2L-201ENST00000261963 OPN1MW2P0DN77 364 aa19.23■□□□□ 0.67
MCF2L-201ENST00000261963 OPN1MW3P0DN78 364 aa19.23■□□□□ 0.67
MCF2L-201ENST00000261963 WNT5AP41221 380 aa19.23■□□□□ 0.67
MCF2L-201ENST00000261963 OR1P1Q8NH06 330 aa19.23■□□□□ 0.67
MCF2L-201ENST00000261963 PLEKHF2Q9H8W4 249 aa19.23■□□□□ 0.67
MCF2L-201ENST00000261963 IL18BPO95998 194 aa19.22■□□□□ 0.67
MCF2L-201ENST00000261963 HERPUD1Q15011 391 aa19.22■□□□□ 0.67
MCF2L-201ENST00000261963 SRSF7Q16629 238 aaKnown RBP eCLIP19.22■□□□□ 0.67
MCF2L-201ENST00000261963 TMEM171Q8WVE6 324 aa19.22■□□□□ 0.67
MCF2L-201ENST00000261963 C11orf1Q9H5F2 150 aa19.22■□□□□ 0.67
MCF2L-201ENST00000261963 KLF13Q9Y2Y9 288 aaPredicted RBP19.22■□□□□ 0.67
MCF2L-201ENST00000261963 C3orf85A0A1B0GTC6 90 aa19.22■□□□□ 0.67
MCF2L-201ENST00000261963 LOC102723971A0A1B0GUV8 181 aa19.22■□□□□ 0.67
MCF2L-201ENST00000261963 RAB4AP20338 218 aa19.22■□□□□ 0.67
MCF2L-201ENST00000261963 RAB11AP62491 216 aa19.22■□□□□ 0.67
MCF2L-201ENST00000261963 MEX3BQ6ZN04 569 aaKnown RBP19.22■□□□□ 0.67
MCF2L-201ENST00000261963 CMTM1Q8IZ96 169 aa19.22■□□□□ 0.67
MCF2L-201ENST00000261963 OR10A7Q8NGE5 316 aa19.22■□□□□ 0.67
MCF2L-201ENST00000261963 OR5A2Q8NGI9 324 aa19.22■□□□□ 0.67
MCF2L-201ENST00000261963 LOXL4Q96JB6 756 aa19.22■□□□□ 0.67
MCF2L-201ENST00000261963 HSPB6O14558 160 aa19.21■□□□□ 0.67
MCF2L-201ENST00000261963 TNFSF15O95150 251 aa19.21■□□□□ 0.67
MCF2L-201ENST00000261963 SPINK2P20155 84 aa19.21■□□□□ 0.67
MCF2L-201ENST00000261963 MDKP21741 143 aaPredicted RBP19.21■□□□□ 0.67
MCF2L-201ENST00000261963 MCEMP1Q8IX19 187 aa19.21■□□□□ 0.67
MCF2L-201ENST00000261963 TRAPPC2LH3BP13 241 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms