RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 SYT8Q8NBV8 401 aa12.49□□□□□ -0.41
CUX2-201ENST00000261726 ADAMTS17Q8TE56 1095 aa12.49□□□□□ -0.41
CUX2-201ENST00000261726 MRPL13Q9BYD1 178 aaKnown RBP12.49□□□□□ -0.41
CUX2-201ENST00000261726 OR2W1Q9Y3N9 320 aa12.49□□□□□ -0.41
CUX2-201ENST00000261726 ZNHIT1O43257 154 aa12.49□□□□□ -0.41
CUX2-201ENST00000261726 CCL3P10147 92 aa12.49□□□□□ -0.41
CUX2-201ENST00000261726 PF4V1P10720 104 aa12.49□□□□□ -0.41
CUX2-201ENST00000261726 KRTCAP3Q53RY4 240 aa12.49□□□□□ -0.41
CUX2-201ENST00000261726 ZNF488Q96MN9 340 aa12.49□□□□□ -0.41
CUX2-201ENST00000261726 HDHD3Q9BSH5 251 aaPredicted RBP12.49□□□□□ -0.41
CUX2-201ENST00000261726 CTGFP29279 349 aa12.48□□□□□ -0.41
CUX2-201ENST00000261726 NUBP1P53384 320 aa12.48□□□□□ -0.41
CUX2-201ENST00000261726 COX19Q49B96 90 aa12.48□□□□□ -0.41
CUX2-201ENST00000261726 NUP37Q8NFH4 326 aa12.48□□□□□ -0.41
CUX2-201ENST00000261726 NEURL2Q9BR09 285 aa12.48□□□□□ -0.41
CUX2-201ENST00000261726 B4DEV8 164 aa12.48□□□□□ -0.41
CUX2-201ENST00000261726 IL9P15248 144 aa12.48□□□□□ -0.41
CUX2-201ENST00000261726 TMEM78Q5T7P6 136 aa12.48□□□□□ -0.41
CUX2-201ENST00000261726 SH2D5Q6ZV89 423 aa12.48□□□□□ -0.41
CUX2-201ENST00000261726 MS4A5Q9H3V2 200 aa12.48□□□□□ -0.41
CUX2-201ENST00000261726 CLDN14O95500 239 aa12.48□□□□□ -0.41
CUX2-201ENST00000261726 CRHP06850 196 aa12.48□□□□□ -0.41
CUX2-201ENST00000261726 MDP1Q86V88 176 aa12.48□□□□□ -0.41
CUX2-201ENST00000261726 RHBDD2Q6NTF9 364 aa12.48□□□□□ -0.41
CUX2-201ENST00000261726 MRAP2Q96G30 205 aa12.48□□□□□ -0.41
CUX2-201ENST00000261726 YBX2Q9Y2T7 364 aaKnown RBP12.48□□□□□ -0.41
CUX2-201ENST00000261726 RAXQ9Y2V3 346 aa12.48□□□□□ -0.41
CUX2-201ENST00000261726 CNTRLQ7Z7A1 2325 aa12.48□□□□□ -0.41
CUX2-201ENST00000261726 TMEM218A2RU14 115 aa12.48□□□□□ -0.41
CUX2-201ENST00000261726 C7orf77A4D0Y5 90 aa12.48□□□□□ -0.41
CUX2-201ENST00000261726 M0QZK8 103 aa12.48□□□□□ -0.41
CUX2-201ENST00000261726 ATXN7O15265 892 aaPredicted RBP12.48□□□□□ -0.41
CUX2-201ENST00000261726 GGCTO75223 188 aaKnown RBP12.48□□□□□ -0.41
CUX2-201ENST00000261726 ST6GAL2Q96JF0 529 aa12.48□□□□□ -0.41
CUX2-201ENST00000261726 SPAARA0A1B0GVQ0 90 aa12.48□□□□□ -0.41
CUX2-201ENST00000261726 C16orf97H3BN30 126 aa12.48□□□□□ -0.41
CUX2-201ENST00000261726 SIAH2O43255 324 aa12.48□□□□□ -0.41
CUX2-201ENST00000261726 COX6CP09669 75 aa12.48□□□□□ -0.41
CUX2-201ENST00000261726 PRR35P0CG20 571 aa12.48□□□□□ -0.41
CUX2-201ENST00000261726 MSRB3Q8IXL7 192 aa12.48□□□□□ -0.41
CUX2-201ENST00000261726 TPRX1Q8N7U7 411 aa12.48□□□□□ -0.41
CUX2-201ENST00000261726 BVESQ8NE79 360 aa12.48□□□□□ -0.41
CUX2-201ENST00000261726 TTC3P53804 2025 aa12.48□□□□□ -0.41
CUX2-201ENST00000261726 GPR6P46095 362 aaPredicted RBP12.47□□□□□ -0.41
CUX2-201ENST00000261726 RPL31P62899 125 aaKnown RBP12.47□□□□□ -0.41
CUX2-201ENST00000261726 OR2Y1Q8NGV0 311 aa12.47□□□□□ -0.41
CUX2-201ENST00000261726 MRPL30Q8TCC3 161 aaKnown RBP12.47□□□□□ -0.41
CUX2-201ENST00000261726 RAG2P55895 527 aa12.47□□□□□ -0.41
CUX2-201ENST00000261726 MRGPRGQ86SM5 289 aa12.47□□□□□ -0.41
CUX2-201ENST00000261726 GUCD1Q96NT3 240 aa12.47□□□□□ -0.41
CUX2-201ENST00000261726 SF3B5Q9BWJ5 86 aaKnown RBP12.47□□□□□ -0.41
CUX2-201ENST00000261726 COL11A1P12107 1806 aaPredicted RBP12.47□□□□□ -0.41
CUX2-201ENST00000261726 PLAUP00749 431 aa12.47□□□□□ -0.41
CUX2-201ENST00000261726 ADRA2AP08913 450 aa12.47□□□□□ -0.41
CUX2-201ENST00000261726 CCL8P80075 99 aa12.47□□□□□ -0.41
CUX2-201ENST00000261726 TEX30Q5JUR7 227 aa12.47□□□□□ -0.41
CUX2-201ENST00000261726 OVCH2Q7RTZ1 564 aa12.47□□□□□ -0.41
CUX2-201ENST00000261726 VN1R4Q7Z5H5 301 aa12.47□□□□□ -0.41
CUX2-201ENST00000261726 PPIAL4EA0A075B759 164 aa12.47□□□□□ -0.41
CUX2-201ENST00000261726 PPIAL4DF5H284 164 aa12.47□□□□□ -0.41
CUX2-201ENST00000261726 HRKO00198 91 aa12.47□□□□□ -0.41
CUX2-201ENST00000261726 PPIAL4FP0DN26 164 aa12.47□□□□□ -0.41
CUX2-201ENST00000261726 ID4P47928 161 aa12.47□□□□□ -0.41
CUX2-201ENST00000261726 LSM6P62312 80 aaKnown RBP12.47□□□□□ -0.41
CUX2-201ENST00000261726 FAM74A3Q4VXF1 159 aa12.47□□□□□ -0.41
CUX2-201ENST00000261726 STXBP6Q8NFX7 210 aa12.47□□□□□ -0.41
CUX2-201ENST00000261726 OIT3Q8WWZ8 545 aa12.47□□□□□ -0.41
CUX2-201ENST00000261726 MARVELD1Q9BSK0 173 aa12.47□□□□□ -0.41
CUX2-201ENST00000261726 PPIAL4AQ9Y536 164 aa12.47□□□□□ -0.41
CUX2-201ENST00000261726 NPIPB6E9PJ23 425 aa12.47□□□□□ -0.41
CUX2-201ENST00000261726 J3QT63 122 aa12.47□□□□□ -0.41
CUX2-201ENST00000261726 HYPMO75409 117 aa12.47□□□□□ -0.41
CUX2-201ENST00000261726 NUDT3O95989 172 aa12.47□□□□□ -0.41
CUX2-201ENST00000261726 CXCL3P19876 107 aa12.47□□□□□ -0.41
CUX2-201ENST00000261726 EMP1P54849 157 aa12.47□□□□□ -0.41
CUX2-201ENST00000261726 COL5A1-AS1Q5SY13 56 aa12.47□□□□□ -0.41
CUX2-201ENST00000261726 CCDC144NLQ6NUI1 221 aa12.47□□□□□ -0.41
CUX2-201ENST00000261726 GPA33Q99795 319 aa12.47□□□□□ -0.41
CUX2-201ENST00000261726 MFAP2P55001 183 aa12.46□□□□□ -0.41
CUX2-201ENST00000261726 KLRB1Q12918 225 aa12.46□□□□□ -0.41
CUX2-201ENST00000261726 LHX8Q68G74 356 aa12.46□□□□□ -0.41
CUX2-201ENST00000261726 TRAF4Q9BUZ4 470 aaPredicted RBP12.46□□□□□ -0.41
CUX2-201ENST00000261726 IL36RNQ9UBH0 155 aa12.46□□□□□ -0.41
CUX2-201ENST00000261726 RPL36A-HNRNPH2H7BZ11 118 aa12.46□□□□□ -0.41
CUX2-201ENST00000261726 CISD3P0C7P0 127 aa12.46□□□□□ -0.41
CUX2-201ENST00000261726 KLF9Q13886 244 aaPredicted RBP12.46□□□□□ -0.41
CUX2-201ENST00000261726 GCSAMLQ5JQS6 135 aa12.46□□□□□ -0.41
CUX2-201ENST00000261726 DMKNQ6E0U4 476 aaPredicted RBP12.46□□□□□ -0.41
CUX2-201ENST00000261726 OR4B1Q8NGF8 309 aa12.46□□□□□ -0.41
CUX2-201ENST00000261726 DDB2Q92466 427 aa12.46□□□□□ -0.41
CUX2-201ENST00000261726 PGLYRP3Q96LB9 341 aa12.46□□□□□ -0.41
CUX2-201ENST00000261726 KBTBD11O94819 623 aa12.46□□□□□ -0.42
CUX2-201ENST00000261726 WDR25Q64LD2 544 aaPredicted RBP12.46□□□□□ -0.42
CUX2-201ENST00000261726 SLC25A42Q86VD7 318 aa12.46□□□□□ -0.42
CUX2-201ENST00000261726 CCL13Q99616 98 aa12.46□□□□□ -0.42
CUX2-201ENST00000261726 FLRT3Q9NZU0 649 aa12.46□□□□□ -0.42
CUX2-201ENST00000261726 PPP1R17O96001 155 aa12.46□□□□□ -0.42
CUX2-201ENST00000261726 RCC1P18754 421 aaPredicted RBP12.46□□□□□ -0.42
CUX2-201ENST00000261726 KIAA0040Q15053 153 aa12.46□□□□□ -0.42
CUX2-201ENST00000261726 SURF2Q15527 256 aaPredicted RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms