RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 LINC00205P59089 165 aa10.25□□□□□ -0.77
USHBP1-201ENST00000252597 RAC1P63000 192 aa10.25□□□□□ -0.77
USHBP1-201ENST00000252597 CLEC18CQ8NCF0 446 aa10.25□□□□□ -0.77
USHBP1-201ENST00000252597 CPT1CQ8TCG5 803 aa10.25□□□□□ -0.77
USHBP1-201ENST00000252597 IER2Q9BTL4 223 aa10.25□□□□□ -0.77
USHBP1-201ENST00000252597 ANGPTL4Q9BY76 406 aa10.25□□□□□ -0.77
USHBP1-201ENST00000252597 HES7Q9BYE0 225 aa10.25□□□□□ -0.77
USHBP1-201ENST00000252597 MRPS17Q9Y2R5 130 aaKnown RBP10.25□□□□□ -0.77
USHBP1-201ENST00000252597 IGHV3-43A0A0B4J1X8 118 aa10.24□□□□□ -0.77
USHBP1-201ENST00000252597 YKT6O15498 198 aa10.24□□□□□ -0.77
USHBP1-201ENST00000252597 SPINK4O60575 86 aa10.24□□□□□ -0.77
USHBP1-201ENST00000252597 RHBDL1O75783 438 aa10.24□□□□□ -0.77
USHBP1-201ENST00000252597 IGHV3-43DP0DP04 118 aa10.24□□□□□ -0.77
USHBP1-201ENST00000252597 GLIPR1P48060 266 aa10.24□□□□□ -0.77
USHBP1-201ENST00000252597 TAS2R30P59541 319 aa10.24□□□□□ -0.77
USHBP1-201ENST00000252597 SRPXP78539 464 aa10.24□□□□□ -0.77
USHBP1-201ENST00000252597 H3F3AP84243 136 aa10.24□□□□□ -0.77
USHBP1-201ENST00000252597 EIF3IQ13347 325 aaKnown RBP10.24□□□□□ -0.77
USHBP1-201ENST00000252597 HERPUD1Q15011 391 aa10.24□□□□□ -0.77
USHBP1-201ENST00000252597 C16orf82Q7Z2V1 217 aa10.24□□□□□ -0.77
USHBP1-201ENST00000252597 CLDN23Q96B33 292 aa10.24□□□□□ -0.77
USHBP1-201ENST00000252597 C14orf144Q96I85 54 aa10.24□□□□□ -0.77
USHBP1-201ENST00000252597 CLN8Q9UBY8 286 aa10.24□□□□□ -0.77
USHBP1-201ENST00000252597 DEGS1O15121 323 aa10.24□□□□□ -0.77
USHBP1-201ENST00000252597 CBR3O75828 277 aa10.24□□□□□ -0.77
USHBP1-201ENST00000252597 PDGFBP01127 241 aaPredicted RBP10.24□□□□□ -0.77
USHBP1-201ENST00000252597 ARL16Q0P5N6 197 aa10.24□□□□□ -0.77
USHBP1-201ENST00000252597 P2RY6Q15077 328 aa10.24□□□□□ -0.77
USHBP1-201ENST00000252597 C17orf82Q86X59 251 aaPredicted RBP10.24□□□□□ -0.77
USHBP1-201ENST00000252597 TUSC5Q8IXB3 177 aa10.24□□□□□ -0.77
USHBP1-201ENST00000252597 DMRTC2Q8IXT2 367 aaPredicted RBP10.24□□□□□ -0.77
USHBP1-201ENST00000252597 OR10V1Q8NGI7 309 aa10.24□□□□□ -0.77
USHBP1-201ENST00000252597 IFI44Q8TCB0 444 aa10.24□□□□□ -0.77
USHBP1-201ENST00000252597 SSC4DQ8WTU2 575 aa10.24□□□□□ -0.77
USHBP1-201ENST00000252597 OR4C12Q96R67 309 aa10.24□□□□□ -0.77
USHBP1-201ENST00000252597 GPR87Q9BY21 358 aa10.24□□□□□ -0.77
USHBP1-201ENST00000252597 MTCH1Q9NZJ7 389 aa10.24□□□□□ -0.77
USHBP1-201ENST00000252597 LRP4O75096 1905 aa10.24□□□□□ -0.77
USHBP1-201ENST00000252597 A0A1B0GUS0 222 aa10.23□□□□□ -0.77
USHBP1-201ENST00000252597 OR6C6A6NF89 314 aa10.23□□□□□ -0.77
USHBP1-201ENST00000252597 PGPEP1LA6NFU8 196 aa10.23□□□□□ -0.77
USHBP1-201ENST00000252597 DFFBO76075 338 aa10.23□□□□□ -0.77
USHBP1-201ENST00000252597 CELA3AP09093 270 aa10.23□□□□□ -0.77
USHBP1-201ENST00000252597 BCL2P10415 239 aa10.23□□□□□ -0.77
USHBP1-201ENST00000252597 CXCL12P48061 93 aa10.23□□□□□ -0.77
USHBP1-201ENST00000252597 PLGLB1Q02325 96 aa10.23□□□□□ -0.77
USHBP1-201ENST00000252597 PRSS8Q16651 343 aa10.23□□□□□ -0.77
USHBP1-201ENST00000252597 HIST3H3Q16695 136 aa10.23□□□□□ -0.77
USHBP1-201ENST00000252597 WDR74Q6RFH5 385 aaPredicted RBP10.23□□□□□ -0.77
USHBP1-201ENST00000252597 SSX7Q7RTT5 188 aa10.23□□□□□ -0.77
USHBP1-201ENST00000252597 HIST3H2BBQ8N257 126 aa10.23□□□□□ -0.77
USHBP1-201ENST00000252597 OR13D1Q8NGV5 346 aa10.23□□□□□ -0.77
USHBP1-201ENST00000252597 RCC1LQ96I51 464 aaKnown RBP10.23□□□□□ -0.77
USHBP1-201ENST00000252597 HINT2Q9BX68 163 aa10.23□□□□□ -0.77
USHBP1-201ENST00000252597 RPL36A-HNRNPH2H7BZ11 118 aa10.23□□□□□ -0.77
USHBP1-201ENST00000252597 SYNGR2O43760 224 aa10.23□□□□□ -0.77
USHBP1-201ENST00000252597 F2RP25116 425 aa10.23□□□□□ -0.77
USHBP1-201ENST00000252597 FOLR3P41439 243 aa10.23□□□□□ -0.77
USHBP1-201ENST00000252597 PLP2Q04941 152 aa10.23□□□□□ -0.77
USHBP1-201ENST00000252597 PCOLCEQ15113 449 aa10.23□□□□□ -0.77
USHBP1-201ENST00000252597 GPR35Q9HC97 309 aa10.23□□□□□ -0.77
USHBP1-201ENST00000252597 hCG_38984A0A1B0GV85 526 aa10.23□□□□□ -0.77
USHBP1-201ENST00000252597 IL2RGP31785 369 aa10.23□□□□□ -0.77
USHBP1-201ENST00000252597 RAC3P60763 192 aa10.23□□□□□ -0.77
USHBP1-201ENST00000252597 ZNF709Q8N972 641 aa10.23□□□□□ -0.77
USHBP1-201ENST00000252597 LYPD6BQ8NI32 183 aa10.23□□□□□ -0.77
USHBP1-201ENST00000252597 TMEM54Q969K7 222 aa10.23□□□□□ -0.77
USHBP1-201ENST00000252597 CUL9Q8IWT3 2517 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 KIR2DS1A0A191URI9 304 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 ANKRD30BLA7E2S9 258 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 PTBP3O95758 552 aaKnown RBP10.22□□□□□ -0.77
USHBP1-201ENST00000252597 G6PCP35575 357 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 CEACAM6P40199 344 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 KIR2DS4P43632 304 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 GALR1P47211 349 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 CASP6P55212 293 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 STARD6P59095 220 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 COL10A1Q03692 680 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 KIR2DS1Q14954 304 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 KCNMB1Q16558 191 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 C10orf128Q5T292 105 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 LYSMD4Q5XG99 296 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 TMEM211Q6ICI0 200 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 MISP3Q96FF7 219 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 FZR1Q9UM11 496 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 IGKV1-6A0A0C4DH72 117 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 LRRC3CA6NJW4 275 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 GJE1A6NN92 205 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 HSPB1P04792 205 aaKnown RBP10.22□□□□□ -0.77
USHBP1-201ENST00000252597 CRYGSP22914 178 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 PCBD1P61457 104 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 TGIF2LXQ8IUE1 241 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 HIST1H2BLQ99880 126 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 PATZ1Q9HBE1 687 aaKnown RBP10.22□□□□□ -0.77
USHBP1-201ENST00000252597 TAAR3PQ9P1P4 343 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 PRSS50Q9UI38 385 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 PKDREJQ9NTG1 2253 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 PAGE4O60829 102 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 IFNA1P01562 189 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 HIST1H1BP16401 226 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms