RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 HIGD1AQ9Y241 93 aa11.62□□□□□ -0.55
NEK9-201ENST00000238616 WNT9BO14905 357 aa11.62□□□□□ -0.55
NEK9-201ENST00000238616 CKS2P33552 79 aa11.62□□□□□ -0.55
NEK9-201ENST00000238616 PMELP40967 661 aa11.62□□□□□ -0.55
NEK9-201ENST00000238616 ZNF56Q15929 161 aa11.62□□□□□ -0.55
NEK9-201ENST00000238616 CARFQ8N187 725 aa11.62□□□□□ -0.55
NEK9-201ENST00000238616 ABHD14BQ96IU4 210 aa11.62□□□□□ -0.55
NEK9-201ENST00000238616 DUXBA0A1W2PPF3 345 aa11.62□□□□□ -0.55
NEK9-201ENST00000238616 ATP5J2P56134 94 aa11.62□□□□□ -0.55
NEK9-201ENST00000238616 NXPH1P58417 271 aa11.62□□□□□ -0.55
NEK9-201ENST00000238616 TMEM255AQ5JRV8 349 aa11.62□□□□□ -0.55
NEK9-201ENST00000238616 CDX2Q99626 313 aaPredicted RBP11.62□□□□□ -0.55
NEK9-201ENST00000238616 RBFOX3A6NFN3 312 aa11.62□□□□□ -0.55
NEK9-201ENST00000238616 PRICKLE4Q2TBC4 344 aa11.62□□□□□ -0.55
NEK9-201ENST00000238616 CDCA4Q9BXL8 241 aa11.62□□□□□ -0.55
NEK9-201ENST00000238616 TRAV8-7A0A075B6U6 113 aa11.61□□□□□ -0.55
NEK9-201ENST00000238616 HIST1H1BP16401 226 aaKnown RBP11.61□□□□□ -0.55
NEK9-201ENST00000238616 PTOV1Q86YD1 416 aa11.61□□□□□ -0.55
NEK9-201ENST00000238616 GUCD1Q96NT3 240 aa11.61□□□□□ -0.55
NEK9-201ENST00000238616 PRRX2Q99811 253 aa11.61□□□□□ -0.55
NEK9-201ENST00000238616 DUSP21Q9H596 190 aa11.61□□□□□ -0.55
NEK9-201ENST00000238616 KIF26AQ9ULI4 1882 aaPredicted RBP11.61□□□□□ -0.55
NEK9-201ENST00000238616 SPNP16150 400 aa11.61□□□□□ -0.55
NEK9-201ENST00000238616 REG1AP05451 166 aa11.61□□□□□ -0.55
NEK9-201ENST00000238616 TTC32Q5I0X7 151 aa11.61□□□□□ -0.55
NEK9-201ENST00000238616 LAMTOR1Q6IAA8 161 aa11.61□□□□□ -0.55
NEK9-201ENST00000238616 NTNG2Q96CW9 530 aa11.61□□□□□ -0.55
NEK9-201ENST00000238616 EID2BQ96D98 161 aa11.61□□□□□ -0.55
NEK9-201ENST00000238616 ADTRPQ96IZ2 230 aa11.61□□□□□ -0.55
NEK9-201ENST00000238616 COX6CP09669 75 aa11.61□□□□□ -0.55
NEK9-201ENST00000238616 GZMKP49863 264 aa11.61□□□□□ -0.55
NEK9-201ENST00000238616 ISL1P61371 349 aa11.61□□□□□ -0.55
NEK9-201ENST00000238616 CALHM1Q8IU99 346 aa11.61□□□□□ -0.55
NEK9-201ENST00000238616 CLRN3Q8NCR9 226 aa11.61□□□□□ -0.55
NEK9-201ENST00000238616 TMEM191AQ9H0A3 160 aa11.61□□□□□ -0.55
NEK9-201ENST00000238616 J3QR06 171 aa11.61□□□□□ -0.55
NEK9-201ENST00000238616 ZNHIT1O43257 154 aa11.61□□□□□ -0.55
NEK9-201ENST00000238616 YBX1P67809 324 aaKnown RBP11.61□□□□□ -0.55
NEK9-201ENST00000238616 PMS2CLQ68D20 193 aa11.61□□□□□ -0.55
NEK9-201ENST00000238616 ANAPC16Q96DE5 110 aa11.61□□□□□ -0.55
NEK9-201ENST00000238616 MYEOVQ96EZ4 313 aa11.61□□□□□ -0.55
NEK9-201ENST00000238616 TSPAN32Q96QS1 320 aa11.61□□□□□ -0.55
NEK9-201ENST00000238616 PDCD6O75340 191 aa11.61□□□□□ -0.55
NEK9-201ENST00000238616 CCDC144NLQ6NUI1 221 aa11.61□□□□□ -0.55
NEK9-201ENST00000238616 OR2T10Q8NGZ9 312 aa11.61□□□□□ -0.55
NEK9-201ENST00000238616 SPNS1Q9H2V7 528 aa11.61□□□□□ -0.55
NEK9-201ENST00000238616 RNF7Q9UBF6 113 aa11.61□□□□□ -0.55
NEK9-201ENST00000238616 FUT9Q9Y231 359 aa11.61□□□□□ -0.55
NEK9-201ENST00000238616 CCL27Q9Y4X3 112 aa11.61□□□□□ -0.55
NEK9-201ENST00000238616 TET2Q6N021 2002 aaPredicted RBP11.61□□□□□ -0.55
NEK9-201ENST00000238616 HINT1P49773 126 aaPredicted RBP11.6□□□□□ -0.55
NEK9-201ENST00000238616 C21orf62-AS1Q17RA5 79 aa11.6□□□□□ -0.55
NEK9-201ENST00000238616 JMJD6Q6NYC1 403 aaPredicted RBP11.6□□□□□ -0.55
NEK9-201ENST00000238616 SLC35E3Q7Z769 313 aa11.6□□□□□ -0.55
NEK9-201ENST00000238616 ARRDC1Q8N5I2 433 aa11.6□□□□□ -0.55
NEK9-201ENST00000238616 GPBAR1Q8TDU6 330 aa11.6□□□□□ -0.55
NEK9-201ENST00000238616 NEU1Q99519 415 aa11.6□□□□□ -0.55
NEK9-201ENST00000238616 SUMO2P61956 95 aaKnown RBP11.6□□□□□ -0.55
NEK9-201ENST00000238616 HCP5Q6MZN7 132 aa11.6□□□□□ -0.55
NEK9-201ENST00000238616 DPPA3Q6W0C5 159 aa11.6□□□□□ -0.55
NEK9-201ENST00000238616 SLC25A42Q86VD7 318 aa11.6□□□□□ -0.55
NEK9-201ENST00000238616 ZDHHC22Q8N966 263 aa11.6□□□□□ -0.55
NEK9-201ENST00000238616 ASB10Q8WXI3 467 aa11.6□□□□□ -0.55
NEK9-201ENST00000238616 DNAJB12Q9NXW2 375 aaKnown RBP11.6□□□□□ -0.55
NEK9-201ENST00000238616 KIAA1549Q9HCM3 1950 aa11.6□□□□□ -0.55
NEK9-201ENST00000238616 SNURFLB1AK76 121 aa11.6□□□□□ -0.55
NEK9-201ENST00000238616 LMX1BO60663 402 aa11.6□□□□□ -0.55
NEK9-201ENST00000238616 MRPL58Q14197 206 aaKnown RBP11.6□□□□□ -0.55
NEK9-201ENST00000238616 WDR25Q64LD2 544 aaPredicted RBP11.6□□□□□ -0.55
NEK9-201ENST00000238616 SYS1Q8N2H4 156 aa11.6□□□□□ -0.55
NEK9-201ENST00000238616 ZCCHC14Q8WYQ9 949 aaKnown RBP11.6□□□□□ -0.55
NEK9-201ENST00000238616 STARD10Q9Y365 291 aa11.6□□□□□ -0.55
NEK9-201ENST00000238616 CXorf1O96002 111 aa11.6□□□□□ -0.55
NEK9-201ENST00000238616 SPNS2Q8IVW8 549 aa11.6□□□□□ -0.55
NEK9-201ENST00000238616 PDFQ9HBH1 243 aa11.6□□□□□ -0.55
NEK9-201ENST00000238616 PTP4A1Q93096 173 aa11.6□□□□□ -0.55
NEK9-201ENST00000238616 MRPS18BQ9Y676 258 aaKnown RBP11.6□□□□□ -0.55
NEK9-201ENST00000238616 FUCA1P04066 466 aa11.6□□□□□ -0.55
NEK9-201ENST00000238616 A0A087X0M5 115 aa11.6□□□□□ -0.55
NEK9-201ENST00000238616 A0A1B0GX30 115 aa11.6□□□□□ -0.55
NEK9-201ENST00000238616 CTAG2O75638 210 aa11.6□□□□□ -0.55
NEK9-201ENST00000238616 RAC3P60763 192 aa11.6□□□□□ -0.55
NEK9-201ENST00000238616 MUC20Q8N307 709 aaPredicted RBP11.6□□□□□ -0.55
NEK9-201ENST00000238616 OR5AU1Q8NGC0 362 aa11.6□□□□□ -0.55
NEK9-201ENST00000238616 SOX21Q9Y651 276 aaPredicted RBP11.6□□□□□ -0.55
NEK9-201ENST00000238616 NPFFO15130 113 aa11.59□□□□□ -0.55
NEK9-201ENST00000238616 CCL4P13236 92 aa11.59□□□□□ -0.55
NEK9-201ENST00000238616 B4GALNT1Q00973 533 aa11.59□□□□□ -0.55
NEK9-201ENST00000238616 F11RQ9Y624 299 aaKnown RBP11.59□□□□□ -0.55
NEK9-201ENST00000238616 K7N7A8 449 aa11.59□□□□□ -0.55
NEK9-201ENST00000238616 CDX1P47902 265 aaPredicted RBP11.59□□□□□ -0.55
NEK9-201ENST00000238616 SNRPEP62304 92 aaKnown RBP11.59□□□□□ -0.55
NEK9-201ENST00000238616 ST3GAL2Q16842 350 aa11.59□□□□□ -0.55
NEK9-201ENST00000238616 GAPTQ8N292 157 aa11.59□□□□□ -0.55
NEK9-201ENST00000238616 ISOC2Q96AB3 205 aa11.59□□□□□ -0.55
NEK9-201ENST00000238616 PAXXQ9BUH6 204 aa11.59□□□□□ -0.55
NEK9-201ENST00000238616 TSPAN2O60636 221 aa11.59□□□□□ -0.55
NEK9-201ENST00000238616 ZNF25P17030 456 aaPredicted RBP11.59□□□□□ -0.55
NEK9-201ENST00000238616 SRD5A2P31213 254 aa11.59□□□□□ -0.55
NEK9-201ENST00000238616 TMEM92Q6UXU6 159 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 264.2 ms