RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 DNAJC4Q9NNZ3 241 aa12.06□□□□□ -0.48
SF1-201ENST00000227503 ST3GAL6Q9Y274 331 aa12.06□□□□□ -0.48
SF1-201ENST00000227503 PGPEP1LA6NFU8 196 aa12.05□□□□□ -0.48
SF1-201ENST00000227503 IGKV1D-33P01593 117 aa12.05□□□□□ -0.48
SF1-201ENST00000227503 IGKV1-33P01594 117 aa12.05□□□□□ -0.48
SF1-201ENST00000227503 C11orf42Q8N5U0 333 aa12.05□□□□□ -0.48
SF1-201ENST00000227503 OR2T10Q8NGZ9 312 aa12.05□□□□□ -0.48
SF1-201ENST00000227503 OR2V1Q8NHB1 315 aa12.05□□□□□ -0.48
SF1-201ENST00000227503 ACY3Q96HD9 319 aa12.05□□□□□ -0.48
SF1-201ENST00000227503 RBM24Q9BX46 236 aaKnown RBP12.05□□□□□ -0.48
SF1-201ENST00000227503 ANGPTL4Q9BY76 406 aa12.05□□□□□ -0.48
SF1-201ENST00000227503 DEFB126Q9BYW3 111 aa12.05□□□□□ -0.48
SF1-201ENST00000227503 CTDSP1Q9GZU7 261 aa12.05□□□□□ -0.48
SF1-201ENST00000227503 PARLQ9H300 379 aa12.05□□□□□ -0.48
SF1-201ENST00000227503 CCL28Q9NRJ3 127 aa12.05□□□□□ -0.48
SF1-201ENST00000227503 IGHV3-15A0A0B4J1V0 119 aa12.05□□□□□ -0.48
SF1-201ENST00000227503 IGHV5-10-1A0A0J9YXX1 117 aa12.05□□□□□ -0.48
SF1-201ENST00000227503 A0A0U1RQK1 487 aa12.05□□□□□ -0.48
SF1-201ENST00000227503 A0A0U1RQV5 110 aa12.05□□□□□ -0.48
SF1-201ENST00000227503 OR7C1O76099 320 aaPredicted RBP12.05□□□□□ -0.48
SF1-201ENST00000227503 MSR1P21757 451 aa12.05□□□□□ -0.48
SF1-201ENST00000227503 C10orf128Q5T292 105 aa12.05□□□□□ -0.48
SF1-201ENST00000227503 TMPRSS7Q7RTY8 843 aa12.05□□□□□ -0.48
SF1-201ENST00000227503 OR10G4Q8NGN3 311 aa12.05□□□□□ -0.48
SF1-201ENST00000227503 OR51H1Q8NH63 302 aa12.05□□□□□ -0.48
SF1-201ENST00000227503 NABP1Q96AH0 204 aa12.05□□□□□ -0.48
SF1-201ENST00000227503 OR2J1Q9GZK6 312 aa12.05□□□□□ -0.48
SF1-201ENST00000227503 OR51I2Q9H344 312 aa12.05□□□□□ -0.48
SF1-201ENST00000227503 OR6C3Q9NZP0 311 aa12.05□□□□□ -0.48
SF1-201ENST00000227503 LY6G6EA0A0G2JKS1 128 aa12.04□□□□□ -0.48
SF1-201ENST00000227503 TLX3O43711 291 aaPredicted RBP12.04□□□□□ -0.48
SF1-201ENST00000227503 HRASP01112 189 aa12.04□□□□□ -0.48
SF1-201ENST00000227503 SCTP09683 121 aa12.04□□□□□ -0.48
SF1-201ENST00000227503 FKBP2P26885 142 aaKnown RBP12.04□□□□□ -0.48
SF1-201ENST00000227503 CCL7P80098 99 aa12.04□□□□□ -0.48
SF1-201ENST00000227503 ETFRF1Q6IPR1 90 aa12.04□□□□□ -0.48
SF1-201ENST00000227503 Q6ZSR3 168 aa12.04□□□□□ -0.48
SF1-201ENST00000227503 FOXL2NBQ6ZUU3 175 aa12.04□□□□□ -0.48
SF1-201ENST00000227503 OR4F5Q8NH21 305 aa12.04□□□□□ -0.48
SF1-201ENST00000227503 SCGB1C1Q8TD33 95 aa12.04□□□□□ -0.48
SF1-201ENST00000227503 LHX4Q969G2 390 aa12.04□□□□□ -0.48
SF1-201ENST00000227503 TMEM54Q969K7 222 aa12.04□□□□□ -0.48
SF1-201ENST00000227503 OR4F4Q96R69 305 aa12.04□□□□□ -0.48
SF1-201ENST00000227503 FOXJ2Q9P0K8 574 aa12.04□□□□□ -0.48
SF1-201ENST00000227503 MRPS17Q9Y2R5 130 aaKnown RBP12.04□□□□□ -0.48
SF1-201ENST00000227503 U3KQA8 63 aa12.04□□□□□ -0.48
SF1-201ENST00000227503 C1QTNF9BB2RNN3 333 aa12.04□□□□□ -0.48
SF1-201ENST00000227503 PATE4P0C8F1 98 aa12.04□□□□□ -0.48
SF1-201ENST00000227503 IGFBP4P22692 258 aa12.04□□□□□ -0.48
SF1-201ENST00000227503 HIST1H3AP68431 136 aa12.04□□□□□ -0.48
SF1-201ENST00000227503 ID3Q02535 119 aa12.04□□□□□ -0.48
SF1-201ENST00000227503 NMSQ5H8A3 153 aa12.04□□□□□ -0.48
SF1-201ENST00000227503 TIPARPQ7Z3E1 657 aaKnown RBP12.04□□□□□ -0.48
SF1-201ENST00000227503 GJC3Q8NFK1 279 aa12.04□□□□□ -0.48
SF1-201ENST00000227503 VN1R17PQ8TDU5 208 aa12.04□□□□□ -0.48
SF1-201ENST00000227503 ZNF837Q96EG3 531 aaPredicted RBP12.04□□□□□ -0.48
SF1-201ENST00000227503 C19orf25Q9UFG5 118 aaPredicted RBP12.04□□□□□ -0.48
SF1-201ENST00000227503 RNF115Q9Y4L5 304 aa12.04□□□□□ -0.48
SF1-201ENST00000227503 ZNF320A2RRD8 509 aa12.04□□□□□ -0.48
SF1-201ENST00000227503 IL3RAP26951 378 aa12.04□□□□□ -0.48
SF1-201ENST00000227503 OR10J1P30954 320 aa12.04□□□□□ -0.48
SF1-201ENST00000227503 OTX1P32242 354 aaPredicted RBP12.04□□□□□ -0.48
SF1-201ENST00000227503 MDH2P40926 338 aaKnown RBP12.04□□□□□ -0.48
SF1-201ENST00000227503 Q6ZRM9 215 aa12.04□□□□□ -0.48
SF1-201ENST00000227503 NEK7Q8TDX7 302 aa12.04□□□□□ -0.48
SF1-201ENST00000227503 ZNF845Q96IR2 970 aaPredicted RBP12.04□□□□□ -0.48
SF1-201ENST00000227503 ZNF385AQ96PM9 386 aaKnown RBP12.04□□□□□ -0.48
SF1-201ENST00000227503 IMMP2LQ96T52 175 aa12.04□□□□□ -0.48
SF1-201ENST00000227503 HNF1AP20823 631 aa12.03□□□□□ -0.48
SF1-201ENST00000227503 CCKARP32238 428 aa12.03□□□□□ -0.48
SF1-201ENST00000227503 MRPL14Q6P1L8 145 aaKnown RBP12.03□□□□□ -0.48
SF1-201ENST00000227503 CYP2G1PQ6ZSU1 146 aa12.03□□□□□ -0.48
SF1-201ENST00000227503 Q6ZWC4 215 aa12.03□□□□□ -0.48
SF1-201ENST00000227503 PP6455Q8WZ26 134 aa12.03□□□□□ -0.48
SF1-201ENST00000227503 ASCL3Q9NQ33 180 aa12.03□□□□□ -0.48
SF1-201ENST00000227503 PLEK2Q9NYT0 353 aa12.03□□□□□ -0.48
SF1-201ENST00000227503 CELA2AP08217 269 aa12.03□□□□□ -0.48
SF1-201ENST00000227503 DTYMKP23919 212 aa12.03□□□□□ -0.48
SF1-201ENST00000227503 CD82P27701 267 aa12.03□□□□□ -0.48
SF1-201ENST00000227503 MEF2BQ02080 365 aaPredicted RBP12.03□□□□□ -0.48
SF1-201ENST00000227503 IL24Q13007 206 aa12.03□□□□□ -0.48
SF1-201ENST00000227503 DPPA3Q6W0C5 159 aa12.03□□□□□ -0.48
SF1-201ENST00000227503 HAPLN4Q86UW8 402 aa12.03□□□□□ -0.48
SF1-201ENST00000227503 ZDHHC23Q8IYP9 409 aa12.03□□□□□ -0.48
SF1-201ENST00000227503 ARL6IP6Q8N6S5 226 aa12.03□□□□□ -0.48
SF1-201ENST00000227503 MRPL30Q8TCC3 161 aaKnown RBP12.03□□□□□ -0.48
SF1-201ENST00000227503 CCDC74BQ96LY2 380 aa12.03□□□□□ -0.48
SF1-201ENST00000227503 SPIN2AQ99865 258 aa12.03□□□□□ -0.48
SF1-201ENST00000227503 SPIN2BQ9BPZ2 258 aa12.03□□□□□ -0.48
SF1-201ENST00000227503 MANBALQ9NQG1 85 aa12.03□□□□□ -0.48
SF1-201ENST00000227503 TRAPPC1Q9Y5R8 145 aa12.03□□□□□ -0.48
SF1-201ENST00000227503 TRAV1-1A0A0B4J248 108 aa12.02□□□□□ -0.48
SF1-201ENST00000227503 UBE2L5PA0A1B0GUS4 154 aa12.02□□□□□ -0.48
SF1-201ENST00000227503 M0R135 149 aa12.02□□□□□ -0.48
SF1-201ENST00000227503 KBTBD11O94819 623 aa12.02□□□□□ -0.48
SF1-201ENST00000227503 GYPAP02724 150 aa12.02□□□□□ -0.48
SF1-201ENST00000227503 IL6RP08887 468 aaPredicted RBP12.02□□□□□ -0.48
SF1-201ENST00000227503 LINC00614P0C842 121 aa12.02□□□□□ -0.48
SF1-201ENST00000227503 NPBWR2P48146 333 aa12.02□□□□□ -0.48
SF1-201ENST00000227503 GAGE1Q13065 139 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms