RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 FBXL17Q9UF56 701 aa24.89■■□□□ 1.57
PABPN1-201ENST00000216727 RBM7Q9Y580 266 aaKnown RBP24.89■■□□□ 1.57
PABPN1-201ENST00000216727 SHOXO15266 292 aa24.88■■□□□ 1.57
PABPN1-201ENST00000216727 ADAM20O43506 726 aa24.88■■□□□ 1.57
PABPN1-201ENST00000216727 ZNF737O75373 536 aa24.88■■□□□ 1.57
PABPN1-201ENST00000216727 TFF1P04155 84 aa24.88■■□□□ 1.57
PABPN1-201ENST00000216727 PTAFRP25105 342 aa24.88■■□□□ 1.57
PABPN1-201ENST00000216727 GNMTQ14749 295 aa24.88■■□□□ 1.57
PABPN1-201ENST00000216727 RPL7L1Q6DKI1 246 aaKnown RBP24.88■■□□□ 1.57
PABPN1-201ENST00000216727 CCDC28AQ8IWP9 274 aa24.88■■□□□ 1.57
PABPN1-201ENST00000216727 OR2S2Q9NQN1 319 aa24.88■■□□□ 1.57
PABPN1-201ENST00000216727 SH3BGRL2Q9UJC5 107 aa24.88■■□□□ 1.57
PABPN1-201ENST00000216727 RCL1Q9Y2P8 373 aaKnown RBP24.88■■□□□ 1.57
PABPN1-201ENST00000216727 SPRY3O43610 288 aa24.88■■□□□ 1.57
PABPN1-201ENST00000216727 GPR137BO60478 399 aa24.88■■□□□ 1.57
PABPN1-201ENST00000216727 LHBP01229 141 aa24.88■■□□□ 1.57
PABPN1-201ENST00000216727 OR8U9P0C7N5 309 aa24.88■■□□□ 1.57
PABPN1-201ENST00000216727 IL2RGP31785 369 aa24.88■■□□□ 1.57
PABPN1-201ENST00000216727 NKX2-1P43699 371 aaPredicted RBP24.88■■□□□ 1.57
PABPN1-201ENST00000216727 OR8U1Q8NH10 309 aa24.88■■□□□ 1.57
PABPN1-201ENST00000216727 OR51H1Q8NH63 302 aa24.88■■□□□ 1.57
PABPN1-201ENST00000216727 RNF141Q8WVD5 230 aa24.88■■□□□ 1.57
PABPN1-201ENST00000216727 PARP12Q9H0J9 701 aaKnown RBP24.88■■□□□ 1.57
PABPN1-201ENST00000216727 IGKV1D-17A0A075B6S4 117 aa24.87■■□□□ 1.57
PABPN1-201ENST00000216727 JTBO76095 146 aa24.87■■□□□ 1.57
PABPN1-201ENST00000216727 HBZP02008 142 aa24.87■■□□□ 1.57
PABPN1-201ENST00000216727 SERPINE2P07093 398 aa24.87■■□□□ 1.57
PABPN1-201ENST00000216727 MOGAT3Q86VF5 341 aa24.87■■□□□ 1.57
PABPN1-201ENST00000216727 TMED6Q8WW62 240 aa24.87■■□□□ 1.57
PABPN1-201ENST00000216727 C11orf1Q9H5F2 150 aa24.87■■□□□ 1.57
PABPN1-201ENST00000216727 ZDHHC8Q9ULC8 765 aa24.87■■□□□ 1.57
PABPN1-201ENST00000216727 GLIPR1P48060 266 aa24.86■■□□□ 1.57
PABPN1-201ENST00000216727 SPRNQ5BIV9 151 aa24.86■■□□□ 1.57
PABPN1-201ENST00000216727 EIF5AL1Q6IS14 154 aaKnown RBP24.86■■□□□ 1.57
PABPN1-201ENST00000216727 TRAT1Q6PIZ9 186 aa24.86■■□□□ 1.57
PABPN1-201ENST00000216727 KIAA2026Q5HYC2 2103 aa24.86■■□□□ 1.57
PABPN1-201ENST00000216727 ITLN1Q8WWA0 313 aa24.86■■□□□ 1.57
PABPN1-201ENST00000216727 SLC25A6P12236 298 aa24.85■■□□□ 1.57
PABPN1-201ENST00000216727 ZBTB34Q8NCN2 500 aa24.85■■□□□ 1.57
PABPN1-201ENST00000216727 MRGPRDQ8TDS7 321 aa24.85■■□□□ 1.57
PABPN1-201ENST00000216727 LIN7CQ9NUP9 197 aaKnown RBP24.85■■□□□ 1.57
PABPN1-201ENST00000216727 IL19Q9UHD0 177 aa24.85■■□□□ 1.57
PABPN1-201ENST00000216727 KCNS2Q9ULS6 477 aa24.85■■□□□ 1.57
PABPN1-201ENST00000216727 PPP1R3CQ9UQK1 317 aa24.85■■□□□ 1.57
PABPN1-201ENST00000216727 DRAM1Q8N682 238 aa24.85■■□□□ 1.57
PABPN1-201ENST00000216727 PPP1R35Q8TAP8 253 aa24.85■■□□□ 1.57
PABPN1-201ENST00000216727 ZP3P21754 424 aa24.84■■□□□ 1.57
PABPN1-201ENST00000216727 ID3Q02535 119 aa24.84■■□□□ 1.57
PABPN1-201ENST00000216727 ERGIC1Q969X5 290 aa24.84■■□□□ 1.57
PABPN1-201ENST00000216727 SNX22Q96L94 193 aa24.84■■□□□ 1.57
PABPN1-201ENST00000216727 PLEKHF2Q9H8W4 249 aa24.84■■□□□ 1.57
PABPN1-201ENST00000216727 RAXQ9Y2V3 346 aa24.84■■□□□ 1.57
PABPN1-201ENST00000216727 FAM157CP0CG43 387 aa24.83■■□□□ 1.57
PABPN1-201ENST00000216727 ZNF645Q8N7E2 425 aa24.83■■□□□ 1.57
PABPN1-201ENST00000216727 UBAC2Q8NBM4 344 aa24.83■■□□□ 1.57
PABPN1-201ENST00000216727 OR13A1Q8NGR1 328 aa24.83■■□□□ 1.57
PABPN1-201ENST00000216727 TEX46H3BTG2 121 aa24.83■■□□□ 1.56
PABPN1-201ENST00000216727 PVALBP20472 110 aaPredicted RBP24.83■■□□□ 1.56
PABPN1-201ENST00000216727 MSMO1Q15800 293 aa24.83■■□□□ 1.56
PABPN1-201ENST00000216727 WFDC8Q8IUA0 241 aa24.83■■□□□ 1.56
PABPN1-201ENST00000216727 NINJ1Q92982 152 aa24.83■■□□□ 1.56
PABPN1-201ENST00000216727 RNF212BA8MTL3 300 aa24.82■■□□□ 1.56
PABPN1-201ENST00000216727 KRBOX1C9JBD0 128 aa24.82■■□□□ 1.56
PABPN1-201ENST00000216727 IGHV1-46P01743 117 aa24.82■■□□□ 1.56
PABPN1-201ENST00000216727 THBDP07204 575 aa24.82■■□□□ 1.56
PABPN1-201ENST00000216727 OR52L2PQ8NGH6 319 aa24.82■■□□□ 1.56
PABPN1-201ENST00000216727 RND1Q92730 232 aa24.82■■□□□ 1.56
PABPN1-201ENST00000216727 LSM10Q969L4 123 aaKnown RBP24.82■■□□□ 1.56
PABPN1-201ENST00000216727 VKORC1Q9BQB6 163 aa24.82■■□□□ 1.56
PABPN1-201ENST00000216727 PLCE1Q9P212 2302 aa24.82■■□□□ 1.56
PABPN1-201ENST00000216727 TLN1Q9Y490 2541 aaKnown RBP24.81■■□□□ 1.56
PABPN1-201ENST00000216727 A0A1B0GU03 582 aa24.81■■□□□ 1.56
PABPN1-201ENST00000216727 DPRXA6NFQ7 191 aa24.81■■□□□ 1.56
PABPN1-201ENST00000216727 MGST3O14880 152 aa24.81■■□□□ 1.56
PABPN1-201ENST00000216727 MMP9P14780 707 aa24.81■■□□□ 1.56
PABPN1-201ENST00000216727 POLR2GP62487 172 aaKnown RBP eCLIP24.81■■□□□ 1.56
PABPN1-201ENST00000216727 CXorf66Q5JRM2 361 aaPredicted RBP24.81■■□□□ 1.56
PABPN1-201ENST00000216727 TPRX1Q8N7U7 411 aa24.81■■□□□ 1.56
PABPN1-201ENST00000216727 BOLLQ8N9W6 283 aaKnown RBP24.81■■□□□ 1.56
PABPN1-201ENST00000216727 PITX3O75364 302 aa24.81■■□□□ 1.56
PABPN1-201ENST00000216727 TNFSF4P23510 183 aa24.81■■□□□ 1.56
PABPN1-201ENST00000216727 TNFAIP6P98066 277 aaPredicted RBP24.81■■□□□ 1.56
PABPN1-201ENST00000216727 FAM222BQ8WU58 562 aa24.81■■□□□ 1.56
PABPN1-201ENST00000216727 ABCD4O14678 606 aa24.8■■□□□ 1.56
PABPN1-201ENST00000216727 HTD2P86397 168 aa24.8■■□□□ 1.56
PABPN1-201ENST00000216727 OR2C3Q8N628 320 aa24.8■■□□□ 1.56
PABPN1-201ENST00000216727 ARL11Q969Q4 196 aa24.8■■□□□ 1.56
PABPN1-201ENST00000216727 SMIM3Q9BZL3 60 aa24.8■■□□□ 1.56
PABPN1-201ENST00000216727 ARV1Q9H2C2 271 aa24.8■■□□□ 1.56
PABPN1-201ENST00000216727 GCM1Q9NP62 436 aa24.8■■□□□ 1.56
PABPN1-201ENST00000216727 C15orf65H3BRN8 121 aa24.79■■□□□ 1.56
PABPN1-201ENST00000216727 IGKV1-39P01597 117 aa24.79■■□□□ 1.56
PABPN1-201ENST00000216727 IGKV1D-39P04432 117 aa24.79■■□□□ 1.56
PABPN1-201ENST00000216727 SSTR5P35346 364 aa24.79■■□□□ 1.56
PABPN1-201ENST00000216727 CR1LQ2VPA4 569 aa24.79■■□□□ 1.56
PABPN1-201ENST00000216727 ZNF585BQ52M93 769 aa24.79■■□□□ 1.56
PABPN1-201ENST00000216727 GPR146Q96CH1 333 aa24.79■■□□□ 1.56
PABPN1-201ENST00000216727 TAS2R3Q9NYW6 316 aa24.79■■□□□ 1.56
PABPN1-201ENST00000216727 RNF7Q9UBF6 113 aa24.79■■□□□ 1.56
PABPN1-201ENST00000216727 SPINT2O43291 252 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms