RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 DNASE2O00115 360 aaPredicted RBP14.32□□□□□ -0.12
PHGDH-229ENST00000641891 CAV2P51636 162 aa14.32□□□□□ -0.12
PHGDH-229ENST00000641891 IZUMO4Q1ZYL8 232 aa14.32□□□□□ -0.12
PHGDH-229ENST00000641891 ALKBH2Q6NS38 261 aa14.32□□□□□ -0.12
PHGDH-229ENST00000641891 RPRMLQ8N4K4 120 aa14.32□□□□□ -0.12
PHGDH-229ENST00000641891 OR2C3Q8N628 320 aa14.32□□□□□ -0.12
PHGDH-229ENST00000641891 TSNAXQ99598 290 aaKnown RBP14.32□□□□□ -0.12
PHGDH-229ENST00000641891 SPIN2AQ99865 258 aa14.32□□□□□ -0.12
PHGDH-229ENST00000641891 SPIN2BQ9BPZ2 258 aa14.32□□□□□ -0.12
PHGDH-229ENST00000641891 NKX6-2Q9C056 277 aaPredicted RBP14.32□□□□□ -0.12
PHGDH-229ENST00000641891 HES4Q9HCC6 221 aa14.32□□□□□ -0.12
PHGDH-229ENST00000641891 UFSP2Q9NUQ7 469 aa14.32□□□□□ -0.12
PHGDH-229ENST00000641891 PPP1R3CQ9UQK1 317 aa14.32□□□□□ -0.12
PHGDH-229ENST00000641891 BORCS7-ASMTA0A0B4J1R7 106 aa14.31□□□□□ -0.12
PHGDH-229ENST00000641891 IGHV2OR16-5A0A0B4J2B6 119 aa14.31□□□□□ -0.12
PHGDH-229ENST00000641891 A6NLC8 198 aa14.31□□□□□ -0.12
PHGDH-229ENST00000641891 NUDT19A8MXV4 375 aa14.31□□□□□ -0.12
PHGDH-229ENST00000641891 NPIPB11E5RHQ5 1161 aa14.31□□□□□ -0.12
PHGDH-229ENST00000641891 K7EM74 188 aa14.31□□□□□ -0.12
PHGDH-229ENST00000641891 HSPA12AO43301 675 aa14.31□□□□□ -0.12
PHGDH-229ENST00000641891 F12P00748 615 aaPredicted RBP14.31□□□□□ -0.12
PHGDH-229ENST00000641891 EPHA1P21709 976 aa14.31□□□□□ -0.12
PHGDH-229ENST00000641891 VDAC1P21796 283 aa14.31□□□□□ -0.12
PHGDH-229ENST00000641891 OMGP23515 440 aa14.31□□□□□ -0.12
PHGDH-229ENST00000641891 MOB1BQ7L9L4 216 aa14.31□□□□□ -0.12
PHGDH-229ENST00000641891 BHLHA15Q7RTS1 189 aaPredicted RBP14.31□□□□□ -0.12
PHGDH-229ENST00000641891 HSD17B11Q8NBQ5 300 aa14.31□□□□□ -0.12
PHGDH-229ENST00000641891 GINS3Q9BRX5 216 aa14.31□□□□□ -0.12
PHGDH-229ENST00000641891 TAAR3PQ9P1P4 343 aa14.31□□□□□ -0.12
PHGDH-229ENST00000641891 F8W036 122 aa14.3□□□□□ -0.12
PHGDH-229ENST00000641891 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.3□□□□□ -0.12
PHGDH-229ENST00000641891 TMEM50AO95807 157 aa14.3□□□□□ -0.12
PHGDH-229ENST00000641891 IGLV1-44P01699 117 aa14.3□□□□□ -0.12
PHGDH-229ENST00000641891 OR8U9P0C7N5 309 aa14.3□□□□□ -0.12
PHGDH-229ENST00000641891 NUBP1P53384 320 aa14.3□□□□□ -0.12
PHGDH-229ENST00000641891 BLOC1S1P78537 153 aa14.3□□□□□ -0.12
PHGDH-229ENST00000641891 TAGLNQ01995 201 aaKnown RBP14.3□□□□□ -0.12
PHGDH-229ENST00000641891 CLINT1Q14677 625 aa14.3□□□□□ -0.12
PHGDH-229ENST00000641891 SHEQ5VZ18 495 aa14.3□□□□□ -0.12
PHGDH-229ENST00000641891 FAM53AQ6NSI3 398 aaPredicted RBP14.3□□□□□ -0.12
PHGDH-229ENST00000641891 PUSL1Q8N0Z8 303 aaKnown RBP14.3□□□□□ -0.12
PHGDH-229ENST00000641891 OR8U1Q8NH10 309 aa14.3□□□□□ -0.12
PHGDH-229ENST00000641891 CXXC4Q9H2H0 198 aa14.3□□□□□ -0.12
PHGDH-229ENST00000641891 ESRP2Q9H6T0 727 aaKnown RBP14.3□□□□□ -0.12
PHGDH-229ENST00000641891 PARP11Q9NR21 331 aa14.3□□□□□ -0.12
PHGDH-229ENST00000641891 MBNL3Q9NUK0 354 aaKnown RBP14.3□□□□□ -0.12
PHGDH-229ENST00000641891 KCNS2Q9ULS6 477 aa14.3□□□□□ -0.12
PHGDH-229ENST00000641891 RFNGQ9Y644 331 aa14.3□□□□□ -0.12
PHGDH-229ENST00000641891 DUXBA0A1W2PPF3 345 aa14.3□□□□□ -0.12
PHGDH-229ENST00000641891 CLEC18AA5D8T8 446 aa14.3□□□□□ -0.12
PHGDH-229ENST00000641891 C1QL1O75973 258 aa14.3□□□□□ -0.12
PHGDH-229ENST00000641891 ATF4P18848 351 aaPredicted RBP14.3□□□□□ -0.12
PHGDH-229ENST00000641891 FHITP49789 147 aa14.3□□□□□ -0.12
PHGDH-229ENST00000641891 ODF3L1Q8IXM7 274 aa14.3□□□□□ -0.12
PHGDH-229ENST00000641891 CLEC18CQ8NCF0 446 aa14.3□□□□□ -0.12
PHGDH-229ENST00000641891 TLNRD1Q9H1K6 362 aa14.3□□□□□ -0.12
PHGDH-229ENST00000641891 UQCC1Q9NVA1 299 aa14.3□□□□□ -0.12
PHGDH-229ENST00000641891 WIPI2Q9Y4P8 454 aa14.3□□□□□ -0.12
PHGDH-229ENST00000641891 INTS1Q8N201 2190 aaKnown RBP14.3□□□□□ -0.12
PHGDH-229ENST00000641891 GTF3C1Q12789 2109 aa14.29□□□□□ -0.12
PHGDH-229ENST00000641891 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.29□□□□□ -0.12
PHGDH-229ENST00000641891 MED19A0JLT2 244 aaPredicted RBP14.29□□□□□ -0.12
PHGDH-229ENST00000641891 MBD3L4A6NDZ8 208 aaPredicted RBP14.29□□□□□ -0.12
PHGDH-229ENST00000641891 MBD3L3A6NE82 208 aaPredicted RBP14.29□□□□□ -0.12
PHGDH-229ENST00000641891 MBD3L5A6NJ08 208 aaPredicted RBP14.29□□□□□ -0.12
PHGDH-229ENST00000641891 SPP1P10451 314 aa14.29□□□□□ -0.12
PHGDH-229ENST00000641891 CEACAM1P13688 526 aa14.29□□□□□ -0.12
PHGDH-229ENST00000641891 HMGN3Q15651 99 aa14.29□□□□□ -0.12
PHGDH-229ENST00000641891 SWI5Q1ZZU3 235 aa14.29□□□□□ -0.12
PHGDH-229ENST00000641891 MBD3L2Q8NHZ7 208 aaPredicted RBP14.29□□□□□ -0.12
PHGDH-229ENST00000641891 GPR146Q96CH1 333 aa14.29□□□□□ -0.12
PHGDH-229ENST00000641891 RBM7Q9Y580 266 aaKnown RBP14.29□□□□□ -0.12
PHGDH-229ENST00000641891 CACNA1GO43497 2377 aa14.29□□□□□ -0.12
PHGDH-229ENST00000641891 OR5H1A6NKK0 313 aa14.29□□□□□ -0.12
PHGDH-229ENST00000641891 C9JQL5 133 aa14.29□□□□□ -0.12
PHGDH-229ENST00000641891 IGKV1-39P01597 117 aa14.29□□□□□ -0.12
PHGDH-229ENST00000641891 IGKV1D-39P04432 117 aa14.29□□□□□ -0.12
PHGDH-229ENST00000641891 SERPINE2P07093 398 aa14.29□□□□□ -0.12
PHGDH-229ENST00000641891 KITLGP21583 273 aa14.29□□□□□ -0.12
PHGDH-229ENST00000641891 S100GP29377 79 aa14.29□□□□□ -0.12
PHGDH-229ENST00000641891 CEACAM6P40199 344 aa14.29□□□□□ -0.12
PHGDH-229ENST00000641891 ID3Q02535 119 aa14.29□□□□□ -0.12
PHGDH-229ENST00000641891 WDR82Q6UXN9 313 aa14.29□□□□□ -0.12
PHGDH-229ENST00000641891 OR1L1Q8NH94 360 aa14.29□□□□□ -0.12
PHGDH-229ENST00000641891 IL22RA2Q969J5 263 aa14.29□□□□□ -0.12
PHGDH-229ENST00000641891 FAM212BQ9NTI7 297 aaPredicted RBP14.29□□□□□ -0.12
PHGDH-229ENST00000641891 METRNQ9UJH8 293 aa14.29□□□□□ -0.12
PHGDH-229ENST00000641891 PTBP3O95758 552 aaKnown RBP14.28□□□□□ -0.12
PHGDH-229ENST00000641891 SEC11BP0C7V7 166 aa14.28□□□□□ -0.12
PHGDH-229ENST00000641891 PVALBP20472 110 aaPredicted RBP14.28□□□□□ -0.12
PHGDH-229ENST00000641891 F2RL1P55085 397 aa14.28□□□□□ -0.12
PHGDH-229ENST00000641891 VAMP2P63027 116 aa14.28□□□□□ -0.12
PHGDH-229ENST00000641891 AESQ08117 197 aa14.28□□□□□ -0.12
PHGDH-229ENST00000641891 RTP5Q14D33 572 aa14.28□□□□□ -0.12
PHGDH-229ENST00000641891 MSMPQ1L6U9 139 aa14.28□□□□□ -0.12
PHGDH-229ENST00000641891 C10orf91Q5T1B1 145 aa14.28□□□□□ -0.12
PHGDH-229ENST00000641891 ACP7Q6ZNF0 438 aa14.28□□□□□ -0.12
PHGDH-229ENST00000641891 TMEM252Q8N6L7 170 aa14.28□□□□□ -0.12
PHGDH-229ENST00000641891 TMEM171Q8WVE6 324 aa14.28□□□□□ -0.12
PHGDH-229ENST00000641891 LYRM2Q9NU23 88 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 226.9 ms