RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 MICBQ29980 383 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 MPV17LQ2QL34 196 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 NHLRC3Q5JS37 347 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 C11orf87Q6NUJ2 197 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 LINC00299Q6ZSB3 139 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 REC114Q7Z4M0 266 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 Q8NFD4 153 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 OR5R1Q8NH85 324 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 ARHGAP5-AS1Q96IT6 56 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 SSX3Q99909 188 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 DCTN5Q9BTE1 182 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 HES4Q9HCC6 221 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 PLEKHJ1Q9NW61 149 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 ZNF581Q9P0T4 197 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 UBE2QL1A1L167 161 aa8.12□□□□□ -1.11
PHGDH-222ENST00000641587 RFPL4AA6NLU0 287 aa8.12□□□□□ -1.11
PHGDH-222ENST00000641587 OR2AT4A6NND4 320 aa8.12□□□□□ -1.11
PHGDH-222ENST00000641587 RFPL4AL1F8VTS6 287 aa8.12□□□□□ -1.11
PHGDH-222ENST00000641587 H3BUI4 141 aa8.12□□□□□ -1.11
PHGDH-222ENST00000641587 RAB27BO00194 218 aa8.12□□□□□ -1.11
PHGDH-222ENST00000641587 CHST1O43916 411 aa8.12□□□□□ -1.11
PHGDH-222ENST00000641587 OR2H2O95918 312 aa8.12□□□□□ -1.11
PHGDH-222ENST00000641587 PSG2P11465 335 aa8.12□□□□□ -1.11
PHGDH-222ENST00000641587 HIST1H1DP16402 221 aaKnown RBP8.12□□□□□ -1.11
PHGDH-222ENST00000641587 GNB3P16520 340 aa8.12□□□□□ -1.11
PHGDH-222ENST00000641587 FUT3P21217 361 aa8.12□□□□□ -1.11
PHGDH-222ENST00000641587 ETV6P41212 452 aa8.12□□□□□ -1.11
PHGDH-222ENST00000641587 GNG2P59768 71 aa8.12□□□□□ -1.11
PHGDH-222ENST00000641587 MRPS15P82914 257 aaKnown RBP8.12□□□□□ -1.11
PHGDH-222ENST00000641587 ARFRP1Q13795 201 aa8.12□□□□□ -1.11
PHGDH-222ENST00000641587 CDNFQ49AH0 187 aa8.12□□□□□ -1.11
PHGDH-222ENST00000641587 PAN3Q58A45 887 aaKnown RBP8.12□□□□□ -1.11
PHGDH-222ENST00000641587 STUMQ69YW2 141 aa8.12□□□□□ -1.11
PHGDH-222ENST00000641587 PYHIN1Q6K0P9 492 aa8.12□□□□□ -1.11
PHGDH-222ENST00000641587 HCP5Q6MZN7 132 aa8.12□□□□□ -1.11
PHGDH-222ENST00000641587 SLC36A1Q7Z2H8 476 aa8.12□□□□□ -1.11
PHGDH-222ENST00000641587 C6orf201Q7Z4U5 140 aa8.12□□□□□ -1.11
PHGDH-222ENST00000641587 MFSD4AQ8N468 514 aa8.12□□□□□ -1.11
PHGDH-222ENST00000641587 FAM89BQ8N5H3 189 aa8.12□□□□□ -1.11
PHGDH-222ENST00000641587 ASCC1Q8N9N2 400 aaKnown RBP8.12□□□□□ -1.11
PHGDH-222ENST00000641587 BEND2Q8NDZ0 799 aa8.12□□□□□ -1.11
PHGDH-222ENST00000641587 C15orf40Q8WUR7 153 aa8.12□□□□□ -1.11
PHGDH-222ENST00000641587 AJUBAQ96IF1 538 aa8.12□□□□□ -1.11
PHGDH-222ENST00000641587 PECRQ9BY49 303 aa8.12□□□□□ -1.11
PHGDH-222ENST00000641587 MMP28Q9H239 520 aa8.12□□□□□ -1.11
PHGDH-222ENST00000641587 SPACA1Q9HBV2 294 aa8.12□□□□□ -1.11
PHGDH-222ENST00000641587 NECAP2Q9NVZ3 263 aa8.12□□□□□ -1.11
PHGDH-222ENST00000641587 ING3Q9NXR8 418 aa8.12□□□□□ -1.11
PHGDH-222ENST00000641587 RABL2AQ9UBK7 228 aaPredicted RBP8.12□□□□□ -1.11
PHGDH-222ENST00000641587 RABL2BQ9UNT1 228 aa8.12□□□□□ -1.11
PHGDH-222ENST00000641587 V9GYH0 126 aa8.12□□□□□ -1.11
PHGDH-222ENST00000641587 COL7A1Q02388 2944 aa8.11□□□□□ -1.11
PHGDH-222ENST00000641587 IGKV1D-17A0A075B6S4 117 aa8.11□□□□□ -1.11
PHGDH-222ENST00000641587 TMEM235A6NFC5 223 aa8.11□□□□□ -1.11
PHGDH-222ENST00000641587 MCRIP1C9JLW8 97 aa8.11□□□□□ -1.11
PHGDH-222ENST00000641587 J3QRK9 145 aa8.11□□□□□ -1.11
PHGDH-222ENST00000641587 NDUFB3O43676 98 aa8.11□□□□□ -1.11
PHGDH-222ENST00000641587 GSTP1P09211 210 aaKnown RBP8.11□□□□□ -1.11
PHGDH-222ENST00000641587 CD3GP09693 182 aa8.11□□□□□ -1.11
PHGDH-222ENST00000641587 CD28P10747 220 aa8.11□□□□□ -1.11
PHGDH-222ENST00000641587 PTHLHP12272 177 aa8.11□□□□□ -1.11
PHGDH-222ENST00000641587 MUC1P15941 1255 aaPredicted RBP8.11□□□□□ -1.11
PHGDH-222ENST00000641587 PTBP1P26599 531 aaKnown RBP eCLIP8.11□□□□□ -1.11
PHGDH-222ENST00000641587 CHATP28329 748 aa8.11□□□□□ -1.11
PHGDH-222ENST00000641587 PRDX2P32119 198 aa8.11□□□□□ -1.11
PHGDH-222ENST00000641587 KIR2DS4P43632 304 aa8.11□□□□□ -1.11
PHGDH-222ENST00000641587 UBE2E1P51965 193 aa8.11□□□□□ -1.11
PHGDH-222ENST00000641587 COL10A1Q03692 680 aa8.11□□□□□ -1.11
PHGDH-222ENST00000641587 ARL6IP1Q15041 203 aa8.11□□□□□ -1.11
PHGDH-222ENST00000641587 ZNF146Q15072 292 aa8.11□□□□□ -1.11
PHGDH-222ENST00000641587 C11orf91Q3C1V1 193 aa8.11□□□□□ -1.11
PHGDH-222ENST00000641587 PLAC9Q5JTB6 97 aa8.11□□□□□ -1.11
PHGDH-222ENST00000641587 SIGIRRQ6IA17 410 aa8.11□□□□□ -1.11
PHGDH-222ENST00000641587 RTN4RL2Q86UN3 420 aa8.11□□□□□ -1.11
PHGDH-222ENST00000641587 OR8H2Q8N162 312 aa8.11□□□□□ -1.11
PHGDH-222ENST00000641587 SUMF2Q8NBJ7 301 aa8.11□□□□□ -1.11
PHGDH-222ENST00000641587 OR4C13Q8NGP0 309 aa8.11□□□□□ -1.11
PHGDH-222ENST00000641587 OR2T6Q8NHC8 308 aa8.11□□□□□ -1.11
PHGDH-222ENST00000641587 C8orf46Q8TAG6 207 aa8.11□□□□□ -1.11
PHGDH-222ENST00000641587 GAFA1Q96PS6 74 aa8.11□□□□□ -1.11
PHGDH-222ENST00000641587 FAAP24Q9BTP7 215 aa8.11□□□□□ -1.11
PHGDH-222ENST00000641587 DPCDQ9BVM2 203 aaPredicted RBP8.11□□□□□ -1.11
PHGDH-222ENST00000641587 AUNIPQ9H7T9 357 aa8.11□□□□□ -1.11
PHGDH-222ENST00000641587 CHMP1AQ9HD42 196 aaPredicted RBP8.11□□□□□ -1.11
PHGDH-222ENST00000641587 MAB21L2Q9Y586 359 aa8.11□□□□□ -1.11
PHGDH-222ENST00000641587 A0A1W2PQ09 198 aa8.1□□□□□ -1.11
PHGDH-222ENST00000641587 MEIS3P1A6NDR6 274 aa8.1□□□□□ -1.11
PHGDH-222ENST00000641587 ADARB2-AS1A8MUL3 147 aa8.1□□□□□ -1.11
PHGDH-222ENST00000641587 SLC33A1O00400 549 aaPredicted RBP8.1□□□□□ -1.11
PHGDH-222ENST00000641587 MFNGO00587 321 aa8.1□□□□□ -1.11
PHGDH-222ENST00000641587 PRSS3P35030 304 aa8.1□□□□□ -1.11
PHGDH-222ENST00000641587 INPP1P49441 399 aa8.1□□□□□ -1.11
PHGDH-222ENST00000641587 TMEM50BP56557 158 aa8.1□□□□□ -1.11
PHGDH-222ENST00000641587 MRPS10P82664 201 aaKnown RBP8.1□□□□□ -1.11
PHGDH-222ENST00000641587 DGCR2P98153 550 aa8.1□□□□□ -1.11
PHGDH-222ENST00000641587 RBM39Q14498 530 aaKnown RBP8.1□□□□□ -1.11
PHGDH-222ENST00000641587 ATXN7L3Q14CW9 347 aaPredicted RBP8.1□□□□□ -1.11
PHGDH-222ENST00000641587 ZNF79Q15937 498 aa8.1□□□□□ -1.11
PHGDH-222ENST00000641587 LRRC75BQ2VPJ9 315 aa8.1□□□□□ -1.11
PHGDH-222ENST00000641587 ZNF260Q3ZCT1 412 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms