RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	RASSF6	Q6ZTQ3	369 aa		5.1	□□□□□ -1.59
CASC19-238	ENST00000641523	OR5AS1	Q8N127	324 aa		5.1	□□□□□ -1.59
CASC19-238	ENST00000641523	FTMT	Q8N4E7	242 aa		5.1	□□□□□ -1.59
CASC19-238	ENST00000641523	OR2T33	Q8NG76	320 aa		5.1	□□□□□ -1.59
CASC19-238	ENST00000641523	OR10AD1	Q8NGE0	317 aa		5.1	□□□□□ -1.59
CASC19-238	ENST00000641523	SGMS2	Q8NHU3	365 aa		5.1	□□□□□ -1.59
CASC19-238	ENST00000641523	SLC7A6	Q92536	515 aa		5.1	□□□□□ -1.59
CASC19-238	ENST00000641523	ZNF799	Q96GE5	643 aa		5.1	□□□□□ -1.59
CASC19-238	ENST00000641523	SLC6A7	Q99884	636 aa		5.1	□□□□□ -1.59
CASC19-238	ENST00000641523	COPS4	Q9BT78	406 aa		5.1	□□□□□ -1.59
CASC19-238	ENST00000641523	REEP1	Q9H902	201 aa		5.1	□□□□□ -1.59
CASC19-238	ENST00000641523	OPN4	Q9UHM6	478 aa		5.1	□□□□□ -1.59
CASC19-238	ENST00000641523	PRPF19	Q9UMS4	504 aa	Known RBP	5.1	□□□□□ -1.59
CASC19-238	ENST00000641523	INSIG2	Q9Y5U4	225 aa		5.1	□□□□□ -1.59
CASC19-238	ENST00000641523	TANC2	Q9HCD6	1990 aa		5.1	□□□□□ -1.59
CASC19-238	ENST00000641523	GGT3P	A6NGU5	568 aa		5.09	□□□□□ -1.59
CASC19-238	ENST00000641523	ZNF878	C9JN71	531 aa		5.09	□□□□□ -1.59
CASC19-238	ENST00000641523	CLDN34	H7C241	214 aa		5.09	□□□□□ -1.59
CASC19-238	ENST00000641523	DCTN6	O00399	190 aa		5.09	□□□□□ -1.59
CASC19-238	ENST00000641523	BHLHE40	O14503	412 aa		5.09	□□□□□ -1.59
CASC19-238	ENST00000641523	XRCC2	O43543	280 aa		5.09	□□□□□ -1.59
CASC19-238	ENST00000641523	WNT2	P09544	360 aa		5.09	□□□□□ -1.59
CASC19-238	ENST00000641523	FMO3	P31513	532 aa		5.09	□□□□□ -1.59
CASC19-238	ENST00000641523	FUT6	P51993	359 aa		5.09	□□□□□ -1.59
CASC19-238	ENST00000641523	SLC25A1	P53007	311 aa		5.09	□□□□□ -1.59
CASC19-238	ENST00000641523	UBE2G2	P60604	165 aa		5.09	□□□□□ -1.59
CASC19-238	ENST00000641523	TSPAN5	P62079	268 aa		5.09	□□□□□ -1.59
CASC19-238	ENST00000641523	GRB2	P62993	217 aa	Known RBP	5.09	□□□□□ -1.59
CASC19-238	ENST00000641523	OR8G1	Q15617	311 aa		5.09	□□□□□ -1.59
CASC19-238	ENST00000641523	ZNF404	Q494X3	552 aa		5.09	□□□□□ -1.59
CASC19-238	ENST00000641523	TEX30	Q5JUR7	227 aa		5.09	□□□□□ -1.59
CASC19-238	ENST00000641523	CLEC12A	Q5QGZ9	265 aa		5.09	□□□□□ -1.59
CASC19-238	ENST00000641523	OR2T5	Q6IEZ7	315 aa		5.09	□□□□□ -1.59
CASC19-238	ENST00000641523	C9orf139	Q6ZV77	190 aa		5.09	□□□□□ -1.59
CASC19-238	ENST00000641523	ZNF771	Q7L3S4	317 aa	Predicted RBP	5.09	□□□□□ -1.59
CASC19-238	ENST00000641523	COX8C	Q7Z4L0	72 aa		5.09	□□□□□ -1.59
CASC19-238	ENST00000641523	DHFR2	Q86XF0	187 aa		5.09	□□□□□ -1.59
CASC19-238	ENST00000641523	DEFB108B	Q8NET1	73 aa		5.09	□□□□□ -1.59
CASC19-238	ENST00000641523	OR2T29	Q8NH02	315 aa		5.09	□□□□□ -1.59
CASC19-238	ENST00000641523	IL4I1	Q96RQ9	567 aa		5.09	□□□□□ -1.59
CASC19-238	ENST00000641523	MCRIP2	Q9BUT9	160 aa	Known RBP	5.09	□□□□□ -1.59
CASC19-238	ENST00000641523	DGCR6L	Q9BY27	220 aa		5.09	□□□□□ -1.59
CASC19-238	ENST00000641523	CLN8	Q9UBY8	286 aa		5.09	□□□□□ -1.59
CASC19-238	ENST00000641523	FLVCR2	Q9UPI3	526 aa		5.09	□□□□□ -1.59
CASC19-238	ENST00000641523	DYSF	O75923	2080 aa		5.09	□□□□□ -1.59
CASC19-238	ENST00000641523	TRAV38-1	A0A0B4J264	116 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	IGHV2-70D	A0A0C4DH43	119 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	ARRDC5	A6NEK1	342 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	CD300LB	A8K4G0	201 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	PRR32	B1ATL7	298 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523		E9PQ18	207 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523		F5H5P2	479 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	ENSA	O43768	121 aa	Known RBP	5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	MT-ND2	P03891	347 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	FCER2	P06734	321 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	UBC	P0CG48	685 aa	Known RBP	5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	PRTN3	P24158	256 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	KCNJ3	P48549	501 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	ERF	P50548	548 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	UBA52	P62987	128 aa	Known RBP	5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	RPL24	P83731	157 aa	Known RBP	5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	PAX8	Q06710	450 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	ODF4	Q2M2E3	257 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	RNLS	Q5VYX0	342 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	LCN8	Q6JVE9	175 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	DCXR	Q7Z4W1	244 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	AQP11	Q8NBQ7	271 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	OR9Q2	Q8NGE9	314 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	OR52H1	Q8NGJ2	320 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	TEX47	Q8TBZ9	253 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	NUDCD2	Q8WVJ2	157 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	UPRT	Q96BW1	309 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	NSL1	Q96IY1	281 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	ADAT1	Q9BUB4	502 aa	Known RBP	5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	TSSK6	Q9BXA6	273 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	EGLN3	Q9H6Z9	239 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	ABCB9	Q9NP78	766 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	IKZF2	Q9UKS7	526 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	SAMHD1	Q9Y3Z3	626 aa	Known RBP	5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	DOCK11	Q5JSL3	2073 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	IGHV4OR15-8	A0A075B7B6	117 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	SAA2-SAA4	A0A096LPE2	208 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	KIR2DS1	A0A191URI9	304 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	TRAPPC2L	H3BP13	241 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	SH2D1B	O14796	132 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	FAM107A	O95990	144 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	CYB5R3	P00387	301 aa	Predicted RBP	5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	ALPL	P05186	524 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	IGKV2-30	P06310	120 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	SPI1	P17947	270 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	PSMB6	P28072	239 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	HSD11B1	P28845	292 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	PYCR1	P32322	319 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	CDC34	P49427	236 aa	Predicted RBP	5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	FHIT	P49789	147 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	BAMBI	Q13145	260 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	MICA	Q29983	383 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	RSPO1	Q2MKA7	263 aa	Predicted RBP	5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	SPRN	Q5BIV9	151 aa		5.08	□□□□□ -1.6
CASC19-238	ENST00000641523	SAPCD1	Q5SSQ6	148 aa		5.08	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms