RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 SUCNR1Q9BXA5 334 aa7.46□□□□□ -1.22
PHGDH-219ENST00000641513 TREM2Q9NZC2 230 aa7.46□□□□□ -1.22
PHGDH-219ENST00000641513 RCC2Q9P258 522 aaKnown RBP7.46□□□□□ -1.22
PHGDH-219ENST00000641513 ARFGEF3Q5TH69 2177 aa7.46□□□□□ -1.22
PHGDH-219ENST00000641513 YLPM1P49750 1951 aaKnown RBP7.46□□□□□ -1.22
PHGDH-219ENST00000641513 SPTA1P02549 2419 aa7.46□□□□□ -1.22
PHGDH-219ENST00000641513 FAM208BQ5VWN6 2430 aa7.46□□□□□ -1.22
PHGDH-219ENST00000641513 DSCAML1Q8TD84 2053 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 LOC105371267A0A1B0GV96 52 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 A0A1B0GWJ7 208 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 MPTX1A8MV57 137 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 F5H0A9 414 aaPredicted RBP7.45□□□□□ -1.22
PHGDH-219ENST00000641513 SLC33A1O00400 549 aaPredicted RBP7.45□□□□□ -1.22
PHGDH-219ENST00000641513 CCSO14618 274 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 PTBP3O95758 552 aaKnown RBP7.45□□□□□ -1.22
PHGDH-219ENST00000641513 PLAUP00749 431 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 KNG1P01042 644 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 TFF1P04155 84 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 GLAP06280 429 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 OR5H8P0DN80 308 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 EGR1P18146 543 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 APOBEC3AP31941 199 aaPredicted RBP7.45□□□□□ -1.22
PHGDH-219ENST00000641513 CD80P33681 288 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 MDH2P40926 338 aaKnown RBP7.45□□□□□ -1.22
PHGDH-219ENST00000641513 GABRA2P47869 451 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 SRPXP78539 464 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 CCL8P80075 99 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 ATXN7L3Q14CW9 347 aaPredicted RBP7.45□□□□□ -1.22
PHGDH-219ENST00000641513 DAZAP2Q15038 168 aaPredicted RBP7.45□□□□□ -1.22
PHGDH-219ENST00000641513 ZNF146Q15072 292 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 IL34Q6ZMJ4 242 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 KCTD9Q7L273 389 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 SGPP2Q8IWX5 399 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 DMRTC2Q8IXT2 367 aaPredicted RBP7.45□□□□□ -1.22
PHGDH-219ENST00000641513 FAM185AQ8N0U4 392 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 ZCCHC24Q8N2G6 241 aaKnown RBP7.45□□□□□ -1.22
PHGDH-219ENST00000641513 CASTOR1Q8WTX7 329 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 RNF141Q8WVD5 230 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 DCUN1D4Q92564 292 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 MARC2Q969Z3 335 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 ABHD14BQ96IU4 210 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 SEC22AQ96IW7 307 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 DIRC2Q96SL1 478 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 ZNF2Q9BSG1 426 aaPredicted RBP7.45□□□□□ -1.22
PHGDH-219ENST00000641513 EGLN1Q9GZT9 426 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 RIMS4Q9H426 269 aaPredicted RBP7.45□□□□□ -1.22
PHGDH-219ENST00000641513 IFT22Q9H7X7 185 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 PLEKHA2Q9HB19 425 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 HES4Q9HCC6 221 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 Q9N2K0 584 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 CISD1Q9NZ45 108 aaKnown RBP7.45□□□□□ -1.22
PHGDH-219ENST00000641513 RNF7Q9UBF6 113 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 IL19Q9UHD0 177 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 TRAPPC2LQ9UL33 140 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 WIPI2Q9Y4P8 454 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 POMT1Q9Y6A1 747 aa7.45□□□□□ -1.22
PHGDH-219ENST00000641513 ZZEF1O43149 2961 aa7.44□□□□□ -1.22
PHGDH-219ENST00000641513 TRAV39A0A0B4J263 110 aa7.44□□□□□ -1.22
PHGDH-219ENST00000641513 KIR2DS1A0A191URI9 304 aa7.44□□□□□ -1.22
PHGDH-219ENST00000641513 C17orf100A8MU93 164 aa7.44□□□□□ -1.22
PHGDH-219ENST00000641513 FAM25EA8MYX2 175 aa7.44□□□□□ -1.22
PHGDH-219ENST00000641513 H7C1Q1 480 aa7.44□□□□□ -1.22
PHGDH-219ENST00000641513 CYB5R3P00387 301 aaPredicted RBP7.44□□□□□ -1.22
PHGDH-219ENST00000641513 IFNA21P01568 189 aa7.44□□□□□ -1.22
PHGDH-219ENST00000641513 TNFRSF1AP19438 455 aa7.44□□□□□ -1.22
PHGDH-219ENST00000641513 FCGR2CP31995 323 aa7.44□□□□□ -1.22
PHGDH-219ENST00000641513 KIR2DS4P43632 304 aa7.44□□□□□ -1.22
PHGDH-219ENST00000641513 FXYD4P59646 89 aa7.44□□□□□ -1.22
PHGDH-219ENST00000641513 HERV-K104P61576 105 aa7.44□□□□□ -1.22
PHGDH-219ENST00000641513 COL10A1Q03692 680 aa7.44□□□□□ -1.22
PHGDH-219ENST00000641513 KIR2DS1Q14954 304 aa7.44□□□□□ -1.22
PHGDH-219ENST00000641513 TUSC1Q2TAM9 212 aa7.44□□□□□ -1.22
PHGDH-219ENST00000641513 ANKRD55Q3KP44 614 aa7.44□□□□□ -1.22
PHGDH-219ENST00000641513 SLC38A6Q8IZM9 456 aa7.44□□□□□ -1.22
PHGDH-219ENST00000641513 ZNF808Q8N4W9 903 aaPredicted RBP7.44□□□□□ -1.22
PHGDH-219ENST00000641513 PLPPR1Q8TBJ4 325 aa7.44□□□□□ -1.22
PHGDH-219ENST00000641513 MRPL30Q8TCC3 161 aaKnown RBP7.44□□□□□ -1.22
PHGDH-219ENST00000641513 ITLN2Q8WWU7 325 aaPredicted RBP7.44□□□□□ -1.22
PHGDH-219ENST00000641513 ARL11Q969Q4 196 aa7.44□□□□□ -1.22
PHGDH-219ENST00000641513 GCM1Q9NP62 436 aa7.44□□□□□ -1.22
PHGDH-219ENST00000641513 CYTL1Q9NRR1 136 aa7.44□□□□□ -1.22
PHGDH-219ENST00000641513 PPP1R3CQ9UQK1 317 aa7.44□□□□□ -1.22
PHGDH-219ENST00000641513 HIVEP3Q5T1R4 2406 aa7.44□□□□□ -1.22
PHGDH-219ENST00000641513 NBEAQ8NFP9 2946 aa7.44□□□□□ -1.22
PHGDH-219ENST00000641513 ASH1LQ9NR48 2969 aaKnown RBP7.43□□□□□ -1.22
PHGDH-219ENST00000641513 GCN1Q92616 2671 aaKnown RBP7.43□□□□□ -1.22
PHGDH-219ENST00000641513 DUXBA0A1W2PPF3 345 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 TMEM30CPA0ZSE6 113 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 LRRC30A6NM36 301 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 SRRM5B3KS81 715 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 TRDCB7Z8K6 153 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 B9A039 149 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 H0YIZ8 118 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 ZNF205O95201 554 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 NAPSAO96009 420 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 PRB1P04280 392 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 WNT2P09544 360 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 SCTP09683 121 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 PSG2P11465 335 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 PI3P19957 117 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms