RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 RPS25P62851 125 aaKnown RBP14.09□□□□□ -0.15
PNKP-230ENST00000638016 GPR50Q13585 617 aa14.09□□□□□ -0.15
PNKP-230ENST00000638016 HES1Q14469 280 aa14.09□□□□□ -0.15
PNKP-230ENST00000638016 RBM48Q5RL73 367 aaKnown RBP14.09□□□□□ -0.15
PNKP-230ENST00000638016 LIPKQ5VXJ0 399 aa14.09□□□□□ -0.15
PNKP-230ENST00000638016 OR10A7Q8NGE5 316 aa14.09□□□□□ -0.15
PNKP-230ENST00000638016 AKR1E2Q96JD6 320 aa14.09□□□□□ -0.15
PNKP-230ENST00000638016 PCDHB16Q9NRJ7 776 aa14.09□□□□□ -0.15
PNKP-230ENST00000638016 SCN3BQ9NY72 215 aa14.09□□□□□ -0.15
PNKP-230ENST00000638016 TRAPPC2LQ9UL33 140 aa14.09□□□□□ -0.15
PNKP-230ENST00000638016 SC5DO75845 299 aa14.08□□□□□ -0.16
PNKP-230ENST00000638016 PRB2P02812 416 aaPredicted RBP14.08□□□□□ -0.16
PNKP-230ENST00000638016 MYF6P23409 242 aa14.08□□□□□ -0.16
PNKP-230ENST00000638016 MAP2K4P45985 399 aa14.08□□□□□ -0.16
PNKP-230ENST00000638016 NKAPLQ5M9Q1 402 aa14.08□□□□□ -0.16
PNKP-230ENST00000638016 CEACAM19Q7Z692 300 aa14.08□□□□□ -0.16
PNKP-230ENST00000638016 NDUFA11Q86Y39 141 aa14.08□□□□□ -0.16
PNKP-230ENST00000638016 CDH26Q8IXH8 852 aa14.08□□□□□ -0.16
PNKP-230ENST00000638016 DTX3Q8N9I9 347 aa14.08□□□□□ -0.16
PNKP-230ENST00000638016 R3HDM4Q96D70 268 aa14.08□□□□□ -0.16
PNKP-230ENST00000638016 GFI1Q99684 422 aa14.08□□□□□ -0.16
PNKP-230ENST00000638016 UQCC2Q9BRT2 126 aa14.08□□□□□ -0.16
PNKP-230ENST00000638016 MOB4Q9Y3A3 225 aa14.08□□□□□ -0.16
PNKP-230ENST00000638016 TGP01266 2768 aa14.08□□□□□ -0.16
PNKP-230ENST00000638016 IGHV1-3A0A0C4DH29 117 aa14.07□□□□□ -0.16
PNKP-230ENST00000638016 ZNF736B4DX44 427 aaPredicted RBP14.07□□□□□ -0.16
PNKP-230ENST00000638016 H0YHG0 523 aa14.07□□□□□ -0.16
PNKP-230ENST00000638016 CCRL2O00421 344 aa14.07□□□□□ -0.16
PNKP-230ENST00000638016 ORC5O43913 435 aa14.07□□□□□ -0.16
PNKP-230ENST00000638016 HBZP02008 142 aa14.07□□□□□ -0.16
PNKP-230ENST00000638016 FAM106CPP0CH98 169 aa14.07□□□□□ -0.16
PNKP-230ENST00000638016 HSMCR30P0CW71 290 aa14.07□□□□□ -0.16
PNKP-230ENST00000638016 VSIG8P0DPA2 414 aa14.07□□□□□ -0.16
PNKP-230ENST00000638016 TMEM11P17152 192 aa14.07□□□□□ -0.16
PNKP-230ENST00000638016 ZNF134P52741 427 aa14.07□□□□□ -0.16
PNKP-230ENST00000638016 CD83Q01151 205 aa14.07□□□□□ -0.16
PNKP-230ENST00000638016 GNMTQ14749 295 aa14.07□□□□□ -0.16
PNKP-230ENST00000638016 IZUMO2Q6UXV1 221 aa14.07□□□□□ -0.16
PNKP-230ENST00000638016 CENPVQ7Z7K6 275 aaPredicted RBP14.07□□□□□ -0.16
PNKP-230ENST00000638016 MOB3BQ86TA1 216 aa14.07□□□□□ -0.16
PNKP-230ENST00000638016 GAPTQ8N292 157 aa14.07□□□□□ -0.16
PNKP-230ENST00000638016 C5orf56Q8N8D9 126 aa14.07□□□□□ -0.16
PNKP-230ENST00000638016 ZNF439Q8NDP4 499 aa14.07□□□□□ -0.16
PNKP-230ENST00000638016 MRPS24Q96EL2 167 aaKnown RBP14.07□□□□□ -0.16
PNKP-230ENST00000638016 NICN1Q9BSH3 213 aa14.07□□□□□ -0.16
PNKP-230ENST00000638016 ANKRD60Q9BZ19 345 aa14.07□□□□□ -0.16
PNKP-230ENST00000638016 DUSP21Q9H596 190 aa14.07□□□□□ -0.16
PNKP-230ENST00000638016 SPACA1Q9HBV2 294 aa14.07□□□□□ -0.16
PNKP-230ENST00000638016 PDCD6O75340 191 aa14.06□□□□□ -0.16
PNKP-230ENST00000638016 FUT3P21217 361 aa14.06□□□□□ -0.16
PNKP-230ENST00000638016 RAB7AP51149 207 aa14.06□□□□□ -0.16
PNKP-230ENST00000638016 UNC119Q13432 240 aa14.06□□□□□ -0.16
PNKP-230ENST00000638016 BEAN1Q3B7T3 259 aa14.06□□□□□ -0.16
PNKP-230ENST00000638016 HSD17B12Q53GQ0 312 aa14.06□□□□□ -0.16
PNKP-230ENST00000638016 SAMD5Q5TGI4 173 aa14.06□□□□□ -0.16
PNKP-230ENST00000638016 TMEM91Q6ZNR0 172 aa14.06□□□□□ -0.16
PNKP-230ENST00000638016 Q6ZPA2 131 aa14.06□□□□□ -0.16
PNKP-230ENST00000638016 SLC16A12Q6ZSM3 486 aa14.06□□□□□ -0.16
PNKP-230ENST00000638016 THNSL2Q86YJ6 484 aa14.06□□□□□ -0.16
PNKP-230ENST00000638016 OR8H3Q8N146 312 aa14.06□□□□□ -0.16
PNKP-230ENST00000638016 MS4A15Q8N5U1 240 aa14.06□□□□□ -0.16
PNKP-230ENST00000638016 OR52M1Q8NGK5 317 aa14.06□□□□□ -0.16
PNKP-230ENST00000638016 MRPL30Q8TCC3 161 aaKnown RBP14.06□□□□□ -0.16
PNKP-230ENST00000638016 UFD1Q92890 307 aa14.06□□□□□ -0.16
PNKP-230ENST00000638016 NOL4LQ96MY1 436 aaPredicted RBP14.06□□□□□ -0.16
PNKP-230ENST00000638016 SULT4A1Q9BR01 284 aa14.06□□□□□ -0.16
PNKP-230ENST00000638016 CCDC90BQ9GZT6 254 aa14.06□□□□□ -0.16
PNKP-230ENST00000638016 LINC00527Q9UJ94 153 aa14.06□□□□□ -0.16
PNKP-230ENST00000638016 TPRKBQ9Y3C4 175 aa14.06□□□□□ -0.16
PNKP-230ENST00000638016 A0A0A6YYD4 124 aa14.05□□□□□ -0.16
PNKP-230ENST00000638016 H3BUI4 141 aa14.05□□□□□ -0.16
PNKP-230ENST00000638016 RGS10O43665 173 aa14.05□□□□□ -0.16
PNKP-230ENST00000638016 UCHL1P09936 223 aa14.05□□□□□ -0.16
PNKP-230ENST00000638016 SRMP19623 302 aa14.05□□□□□ -0.16
PNKP-230ENST00000638016 CRHBPP24387 322 aa14.05□□□□□ -0.16
PNKP-230ENST00000638016 CHATP28329 748 aa14.05□□□□□ -0.16
PNKP-230ENST00000638016 ZNF816Q0VGE8 651 aaPredicted RBP14.05□□□□□ -0.16
PNKP-230ENST00000638016 OXLD1Q5BKU9 147 aa14.05□□□□□ -0.16
PNKP-230ENST00000638016 CT45A1Q5HYN5 189 aa14.05□□□□□ -0.16
PNKP-230ENST00000638016 C1orf100Q5SVJ3 147 aa14.05□□□□□ -0.16
PNKP-230ENST00000638016 ZNF329Q86UD4 541 aa14.05□□□□□ -0.16
PNKP-230ENST00000638016 LINC00311Q8N616 119 aa14.05□□□□□ -0.16
PNKP-230ENST00000638016 OR52L2PQ8NGH6 319 aa14.05□□□□□ -0.16
PNKP-230ENST00000638016 CT45A3Q8NHU0 189 aa14.05□□□□□ -0.16
PNKP-230ENST00000638016 THRSPQ92748 146 aa14.05□□□□□ -0.16
PNKP-230ENST00000638016 ST6GALNAC6Q969X2 333 aa14.05□□□□□ -0.16
PNKP-230ENST00000638016 CNBD2Q96M20 576 aa14.05□□□□□ -0.16
PNKP-230ENST00000638016 TAF9BQ9HBM6 251 aa14.05□□□□□ -0.16
PNKP-230ENST00000638016 GNG12Q9UBI6 72 aa14.05□□□□□ -0.16
PNKP-230ENST00000638016 FAM90A10PA6NDY2 464 aa14.04□□□□□ -0.16
PNKP-230ENST00000638016 FAM90A7PA6NKC0 464 aa14.04□□□□□ -0.16
PNKP-230ENST00000638016 LINC01548A6NM66 108 aa14.04□□□□□ -0.16
PNKP-230ENST00000638016 FAM90A23PA8MXZ1 464 aa14.04□□□□□ -0.16
PNKP-230ENST00000638016 GAPDHP04406 335 aaKnown RBP14.04□□□□□ -0.16
PNKP-230ENST00000638016 HTR2CP28335 458 aa14.04□□□□□ -0.16
PNKP-230ENST00000638016 P2RY14Q15391 338 aa14.04□□□□□ -0.16
PNKP-230ENST00000638016 GLT8D1Q68CQ7 371 aa14.04□□□□□ -0.16
PNKP-230ENST00000638016 C6orf201Q7Z4U5 140 aa14.04□□□□□ -0.16
PNKP-230ENST00000638016 RTN4IP1Q8WWV3 396 aaPredicted RBP14.04□□□□□ -0.16
PNKP-230ENST00000638016 PHYHIPQ92561 330 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms