RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-231ENST00000637786 Q6ZS49 121 aa18.29■□□□□ 0.52
CHRNA7-231ENST00000637786 IZUMO1Q8IYV9 350 aa18.29■□□□□ 0.52
CHRNA7-231ENST00000637786 OR13D1Q8NGV5 346 aa18.29■□□□□ 0.52
CHRNA7-231ENST00000637786 C15orf40Q8WUR7 153 aa18.29■□□□□ 0.52
CHRNA7-231ENST00000637786 NUDCD2Q8WVJ2 157 aa18.29■□□□□ 0.52
CHRNA7-231ENST00000637786 LHX4Q969G2 390 aa18.29■□□□□ 0.52
CHRNA7-231ENST00000637786 TMEM133Q9H2Q1 129 aa18.29■□□□□ 0.52
CHRNA7-231ENST00000637786 RABL2AQ9UBK7 228 aaPredicted RBP18.29■□□□□ 0.52
CHRNA7-231ENST00000637786 EXTL2Q9UBQ6 330 aa18.29■□□□□ 0.52
CHRNA7-231ENST00000637786 NUP50Q9UKX7 468 aa18.29■□□□□ 0.52
CHRNA7-231ENST00000637786 RABL2BQ9UNT1 228 aa18.29■□□□□ 0.52
CHRNA7-231ENST00000637786 HLA-DQB1P01920 261 aa18.28■□□□□ 0.52
CHRNA7-231ENST00000637786 HBZP02008 142 aa18.28■□□□□ 0.52
CHRNA7-231ENST00000637786 OMGP23515 440 aa18.28■□□□□ 0.52
CHRNA7-231ENST00000637786 CD34P28906 385 aa18.28■□□□□ 0.52
CHRNA7-231ENST00000637786 SRP14P37108 136 aaKnown RBP18.28■□□□□ 0.52
CHRNA7-231ENST00000637786 HLA-DRB3P79483 266 aa18.28■□□□□ 0.52
CHRNA7-231ENST00000637786 CHRFAM7AQ494W8 412 aa18.28■□□□□ 0.52
CHRNA7-231ENST00000637786 CNIH2Q6PI25 160 aa18.28■□□□□ 0.52
CHRNA7-231ENST00000637786 BAIAP2L2Q6UXY1 529 aa18.28■□□□□ 0.52
CHRNA7-231ENST00000637786 RFESDQ8TAC1 157 aa18.28■□□□□ 0.52
CHRNA7-231ENST00000637786 SETD6Q8TBK2 473 aa18.28■□□□□ 0.52
CHRNA7-231ENST00000637786 IGHV1-69DA0A0B4J2H0 117 aa18.27■□□□□ 0.52
CHRNA7-231ENST00000637786 TRDCB7Z8K6 153 aa18.27■□□□□ 0.52
CHRNA7-231ENST00000637786 SSX5O60225 188 aa18.27■□□□□ 0.52
CHRNA7-231ENST00000637786 IGHV1-69P01742 117 aa18.27■□□□□ 0.52
CHRNA7-231ENST00000637786 IGHV4-38-2P0DP08 117 aa18.27■□□□□ 0.52
CHRNA7-231ENST00000637786 GDNFP39905 211 aa18.27■□□□□ 0.52
CHRNA7-231ENST00000637786 KIR2DS4P43632 304 aa18.27■□□□□ 0.52
CHRNA7-231ENST00000637786 CBX5P45973 191 aa18.27■□□□□ 0.52
CHRNA7-231ENST00000637786 DLX1P56177 255 aa18.27■□□□□ 0.52
CHRNA7-231ENST00000637786 HTD2P86397 168 aa18.27■□□□□ 0.52
CHRNA7-231ENST00000637786 SCGB2A2Q13296 93 aa18.27■□□□□ 0.52
CHRNA7-231ENST00000637786 KIR2DS1Q14954 304 aa18.27■□□□□ 0.52
CHRNA7-231ENST00000637786 IL17RELQ6ZVW7 336 aa18.27■□□□□ 0.52
CHRNA7-231ENST00000637786 DTX3Q8N9I9 347 aa18.27■□□□□ 0.52
CHRNA7-231ENST00000637786 OR11H6Q8NGC7 330 aa18.27■□□□□ 0.52
CHRNA7-231ENST00000637786 GALMQ96C23 342 aa18.27■□□□□ 0.52
CHRNA7-231ENST00000637786 OCSTAMPQ9BR26 566 aa18.27■□□□□ 0.52
CHRNA7-231ENST00000637786 MXRA5Q9NR99 2828 aa18.27■□□□□ 0.51
CHRNA7-231ENST00000637786 CRLF1O75462 422 aa18.26■□□□□ 0.51
CHRNA7-231ENST00000637786 LOXL3P58215 753 aa18.26■□□□□ 0.51
CHRNA7-231ENST00000637786 KLRD1Q13241 179 aa18.26■□□□□ 0.51
CHRNA7-231ENST00000637786 Q3ZCU0 254 aa18.26■□□□□ 0.51
CHRNA7-231ENST00000637786 C9orf139Q6ZV77 190 aa18.26■□□□□ 0.51
CHRNA7-231ENST00000637786 OR1L1Q8NH94 360 aa18.26■□□□□ 0.51
CHRNA7-231ENST00000637786 DIRAS2Q96HU8 199 aa18.26■□□□□ 0.51
CHRNA7-231ENST00000637786 SUCNR1Q9BXA5 334 aa18.26■□□□□ 0.51
CHRNA7-231ENST00000637786 CLEC7AQ9BXN2 247 aa18.26■□□□□ 0.51
CHRNA7-231ENST00000637786 SCPEP1Q9HB40 452 aa18.26■□□□□ 0.51
CHRNA7-231ENST00000637786 GFOD1Q9NXC2 390 aa18.26■□□□□ 0.51
CHRNA7-231ENST00000637786 MRPS7Q9Y2R9 242 aaKnown RBP18.26■□□□□ 0.51
CHRNA7-231ENST00000637786 IGHV2-26A0A0B4J1V2 119 aa18.25■□□□□ 0.51
CHRNA7-231ENST00000637786 SDCBPO00560 298 aaPredicted RBP18.25■□□□□ 0.51
CHRNA7-231ENST00000637786 DIRAS3O95661 229 aa18.25■□□□□ 0.51
CHRNA7-231ENST00000637786 SRD5A1P18405 259 aa18.25■□□□□ 0.51
CHRNA7-231ENST00000637786 NFYBP25208 207 aa18.25■□□□□ 0.51
CHRNA7-231ENST00000637786 TNFSF8P32971 234 aa18.25■□□□□ 0.51
CHRNA7-231ENST00000637786 S100A5P33763 92 aa18.25■□□□□ 0.51
CHRNA7-231ENST00000637786 PRSS3P35030 304 aa18.25■□□□□ 0.51
CHRNA7-231ENST00000637786 STEAP3Q658P3 488 aa18.25■□□□□ 0.51
CHRNA7-231ENST00000637786 PNKDQ8N490 385 aa18.25■□□□□ 0.51
CHRNA7-231ENST00000637786 PRR18Q8N4B5 295 aa18.25■□□□□ 0.51
CHRNA7-231ENST00000637786 ZNF286AQ9HBT8 521 aa18.25■□□□□ 0.51
CHRNA7-231ENST00000637786 ZNF230Q9UIE0 474 aaPredicted RBP18.25■□□□□ 0.51
CHRNA7-231ENST00000637786 JPT1Q9UK76 154 aa18.25■□□□□ 0.51
CHRNA7-231ENST00000637786 ODF3BA8MYP8 253 aa18.24■□□□□ 0.51
CHRNA7-231ENST00000637786 SULT1C2O00338 296 aa18.24■□□□□ 0.51
CHRNA7-231ENST00000637786 PTHLHP12272 177 aa18.24■□□□□ 0.51
CHRNA7-231ENST00000637786 COX7A1P24310 79 aa18.24■□□□□ 0.51
CHRNA7-231ENST00000637786 PRB3Q04118 309 aaPredicted RBP18.24■□□□□ 0.51
CHRNA7-231ENST00000637786 MIDNQ504T8 468 aa18.24■□□□□ 0.51
CHRNA7-231ENST00000637786 ZNF626Q68DY1 528 aa18.24■□□□□ 0.51
CHRNA7-231ENST00000637786 ABHD12Q8N2K0 398 aa18.24■□□□□ 0.51
CHRNA7-231ENST00000637786 C8orf31Q8N9H6 132 aa18.24■□□□□ 0.51
CHRNA7-231ENST00000637786 OR4A4PQ8NGN8 299 aa18.24■□□□□ 0.51
CHRNA7-231ENST00000637786 UBALD1Q8TB05 177 aa18.24■□□□□ 0.51
CHRNA7-231ENST00000637786 SVEP1Q4LDE5 3571 aa18.24■□□□□ 0.51
CHRNA7-231ENST00000637786 NPFFO15130 113 aa18.23■□□□□ 0.51
CHRNA7-231ENST00000637786 FABP7O15540 132 aa18.23■□□□□ 0.51
CHRNA7-231ENST00000637786 LPLP06858 475 aa18.23■□□□□ 0.51
CHRNA7-231ENST00000637786 LTC4SQ16873 150 aa18.23■□□□□ 0.51
CHRNA7-231ENST00000637786 CNPY1Q3B7I2 92 aa18.23■□□□□ 0.51
CHRNA7-231ENST00000637786 LY6G6FQ5SQ64 297 aa18.23■□□□□ 0.51
CHRNA7-231ENST00000637786 OR9G1Q8NH87 305 aa18.23■□□□□ 0.51
CHRNA7-231ENST00000637786 ZNF596Q8TC21 504 aa18.23■□□□□ 0.51
CHRNA7-231ENST00000637786 ST6GALNAC5Q9BVH7 336 aa18.23■□□□□ 0.51
CHRNA7-231ENST00000637786 MS4A7Q9GZW8 240 aaPredicted RBP18.23■□□□□ 0.51
CHRNA7-231ENST00000637786 OR2S2Q9NQN1 319 aa18.23■□□□□ 0.51
CHRNA7-231ENST00000637786 GNG12Q9UBI6 72 aa18.23■□□□□ 0.51
CHRNA7-231ENST00000637786 IGHV3OR16-10A0A075B7F0 116 aa18.22■□□□□ 0.51
CHRNA7-231ENST00000637786 SCTP09683 121 aa18.22■□□□□ 0.51
CHRNA7-231ENST00000637786 FAM157CP0CG43 387 aa18.22■□□□□ 0.51
CHRNA7-231ENST00000637786 EPHA1P21709 976 aa18.22■□□□□ 0.51
CHRNA7-231ENST00000637786 PYHIN1Q6K0P9 492 aa18.22■□□□□ 0.51
CHRNA7-231ENST00000637786 HOGA1Q86XE5 327 aa18.22■□□□□ 0.51
CHRNA7-231ENST00000637786 SNX29P2Q8IUI4 249 aa18.22■□□□□ 0.51
CHRNA7-231ENST00000637786 PDZD9Q8IXQ8 264 aa18.22■□□□□ 0.51
CHRNA7-231ENST00000637786 PIP4P2Q8N4L2 257 aa18.22■□□□□ 0.51
CHRNA7-231ENST00000637786 BEND2Q8NDZ0 799 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms