RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 ZNF431Q8TF32 576 aaPredicted RBP12.77□□□□□ -0.37
CLN6-219ENST00000637329 GALMQ96C23 342 aa12.77□□□□□ -0.37
CLN6-219ENST00000637329 KIRREL1Q96J84 757 aa12.77□□□□□ -0.37
CLN6-219ENST00000637329 CCL13Q99616 98 aa12.77□□□□□ -0.37
CLN6-219ENST00000637329 TOLLIPQ9H0E2 274 aa12.77□□□□□ -0.37
CLN6-219ENST00000637329 MED28Q9H204 178 aa12.77□□□□□ -0.37
CLN6-219ENST00000637329 LIME1Q9H400 295 aa12.77□□□□□ -0.37
CLN6-219ENST00000637329 C5orf66Q9H5L9 145 aa12.77□□□□□ -0.37
CLN6-219ENST00000637329 ING3Q9NXR8 418 aa12.77□□□□□ -0.37
CLN6-219ENST00000637329 ZNF69Q9UC07 566 aa12.77□□□□□ -0.37
CLN6-219ENST00000637329 FAM172BPA6NC97 362 aa12.76□□□□□ -0.37
CLN6-219ENST00000637329 ZNF205O95201 554 aa12.76□□□□□ -0.37
CLN6-219ENST00000637329 HLA-AP01891 365 aaKnown RBP12.76□□□□□ -0.37
CLN6-219ENST00000637329 COX6B1P14854 86 aa12.76□□□□□ -0.37
CLN6-219ENST00000637329 AADACP22760 399 aa12.76□□□□□ -0.37
CLN6-219ENST00000637329 RBMXP38159 391 aaKnown RBP12.76□□□□□ -0.37
CLN6-219ENST00000637329 HTD2P86397 168 aa12.76□□□□□ -0.37
CLN6-219ENST00000637329 DHODHQ02127 395 aa12.76□□□□□ -0.37
CLN6-219ENST00000637329 MEF2CQ06413 473 aaPredicted RBP12.76□□□□□ -0.37
CLN6-219ENST00000637329 C11orf88Q6PI97 169 aa12.76□□□□□ -0.37
CLN6-219ENST00000637329 LYG2Q86SG7 212 aa12.76□□□□□ -0.37
CLN6-219ENST00000637329 ZNF565Q8N9K5 539 aa12.76□□□□□ -0.37
CLN6-219ENST00000637329 OR13A1Q8NGR1 328 aa12.76□□□□□ -0.37
CLN6-219ENST00000637329 MRGPRDQ8TDS7 321 aa12.76□□□□□ -0.37
CLN6-219ENST00000637329 MARVELD3Q96A59 401 aa12.76□□□□□ -0.37
CLN6-219ENST00000637329 TIMD4Q96H15 378 aa12.76□□□□□ -0.37
CLN6-219ENST00000637329 SEC22CQ9BRL7 303 aa12.76□□□□□ -0.37
CLN6-219ENST00000637329 BEX2Q9BXY8 128 aa12.76□□□□□ -0.37
CLN6-219ENST00000637329 CLEC4MQ9H2X3 399 aaPredicted RBP12.76□□□□□ -0.37
CLN6-219ENST00000637329 CHODLQ9H9P2 273 aa12.76□□□□□ -0.37
CLN6-219ENST00000637329 BEX1Q9HBH7 125 aa12.76□□□□□ -0.37
CLN6-219ENST00000637329 ZNF221Q9UK13 617 aa12.76□□□□□ -0.37
CLN6-219ENST00000637329 ZFHX3Q15911 3703 aa12.76□□□□□ -0.37
CLN6-219ENST00000637329 TRGV10A0A0A0MS01 117 aa12.75□□□□□ -0.37
CLN6-219ENST00000637329 ADAM20O43506 726 aa12.75□□□□□ -0.37
CLN6-219ENST00000637329 SSNA1O43805 119 aa12.75□□□□□ -0.37
CLN6-219ENST00000637329 HBZP02008 142 aa12.75□□□□□ -0.37
CLN6-219ENST00000637329 DAOP14920 347 aa12.75□□□□□ -0.37
CLN6-219ENST00000637329 NFYAP23511 347 aaPredicted RBP12.75□□□□□ -0.37
CLN6-219ENST00000637329 ZBTB25P24278 435 aa12.75□□□□□ -0.37
CLN6-219ENST00000637329 IL2RGP31785 369 aa12.75□□□□□ -0.37
CLN6-219ENST00000637329 EDDM3BP56851 147 aa12.75□□□□□ -0.37
CLN6-219ENST00000637329 DHRS2Q13268 280 aa12.75□□□□□ -0.37
CLN6-219ENST00000637329 CARTPTQ16568 116 aa12.75□□□□□ -0.37
CLN6-219ENST00000637329 TMEM155Q4W5P6 130 aa12.75□□□□□ -0.37
CLN6-219ENST00000637329 LRRC10Q5BKY1 277 aa12.75□□□□□ -0.37
CLN6-219ENST00000637329 FAM185AQ8N0U4 392 aa12.75□□□□□ -0.37
CLN6-219ENST00000637329 CAPSLQ8WWF8 208 aa12.75□□□□□ -0.37
CLN6-219ENST00000637329 IL1F10Q8WWZ1 152 aa12.75□□□□□ -0.37
CLN6-219ENST00000637329 IGFBPL1Q8WX77 278 aa12.75□□□□□ -0.37
CLN6-219ENST00000637329 CORO2AQ92828 525 aa12.75□□□□□ -0.37
CLN6-219ENST00000637329 TOMM40LQ969M1 308 aa12.75□□□□□ -0.37
CLN6-219ENST00000637329 TMEM246Q9BRR3 403 aa12.75□□□□□ -0.37
CLN6-219ENST00000637329 RTBDNQ9BSG5 229 aaPredicted RBP12.75□□□□□ -0.37
CLN6-219ENST00000637329 RSRP1Q9BUV0 290 aa12.75□□□□□ -0.37
CLN6-219ENST00000637329 PLEKHF2Q9H8W4 249 aa12.75□□□□□ -0.37
CLN6-219ENST00000637329 PKDREJQ9NTG1 2253 aa12.75□□□□□ -0.37
CLN6-219ENST00000637329 SLC25A10Q9UBX3 287 aaPredicted RBP12.75□□□□□ -0.37
CLN6-219ENST00000637329 OR2W1Q9Y3N9 320 aa12.75□□□□□ -0.37
CLN6-219ENST00000637329 A0A1B0GW55 424 aa12.74□□□□□ -0.37
CLN6-219ENST00000637329 C15orf65H3BRN8 121 aa12.74□□□□□ -0.37
CLN6-219ENST00000637329 OVOL3O00110 214 aa12.74□□□□□ -0.37
CLN6-219ENST00000637329 HSPA12AO43301 675 aa12.74□□□□□ -0.37
CLN6-219ENST00000637329 NDUFB3O43676 98 aa12.74□□□□□ -0.37
CLN6-219ENST00000637329 CCNKO75909 580 aa12.74□□□□□ -0.37
CLN6-219ENST00000637329 DUS4LO95620 317 aaKnown RBP12.74□□□□□ -0.37
CLN6-219ENST00000637329 DUX4L2P0CJ85 424 aa12.74□□□□□ -0.37
CLN6-219ENST00000637329 DUX4L3P0CJ86 424 aa12.74□□□□□ -0.37
CLN6-219ENST00000637329 DUX4L4P0CJ87 422 aa12.74□□□□□ -0.37
CLN6-219ENST00000637329 DUX4L5P0CJ88 424 aa12.74□□□□□ -0.37
CLN6-219ENST00000637329 DUX4L6P0CJ89 424 aa12.74□□□□□ -0.37
CLN6-219ENST00000637329 DUX4L7P0CJ90 424 aa12.74□□□□□ -0.37
CLN6-219ENST00000637329 SULT1A3P0DMM9 295 aa12.74□□□□□ -0.37
CLN6-219ENST00000637329 SULT1A4P0DMN0 295 aa12.74□□□□□ -0.37
CLN6-219ENST00000637329 SELLP14151 372 aa12.74□□□□□ -0.37
CLN6-219ENST00000637329 COL8A2P25067 703 aa12.74□□□□□ -0.37
CLN6-219ENST00000637329 EFNA4P52798 201 aa12.74□□□□□ -0.37
CLN6-219ENST00000637329 FXYD4P59646 89 aa12.74□□□□□ -0.37
CLN6-219ENST00000637329 RND3P61587 244 aa12.74□□□□□ -0.37
CLN6-219ENST00000637329 BAMBIQ13145 260 aa12.74□□□□□ -0.37
CLN6-219ENST00000637329 PPP1R1AQ13522 171 aa12.74□□□□□ -0.37
CLN6-219ENST00000637329 DUX4L9Q6RFH8 374 aaPredicted RBP12.74□□□□□ -0.37
CLN6-219ENST00000637329 SPICQ8N5J4 248 aa12.74□□□□□ -0.37
CLN6-219ENST00000637329 TPRX1Q8N7U7 411 aa12.74□□□□□ -0.37
CLN6-219ENST00000637329 CCDC71LQ8N9Z2 235 aa12.74□□□□□ -0.37
CLN6-219ENST00000637329 ADAD2Q8NCV1 583 aaKnown RBP12.74□□□□□ -0.37
CLN6-219ENST00000637329 RAB1CQ92928 201 aa12.74□□□□□ -0.37
CLN6-219ENST00000637329 NINJ1Q92982 152 aa12.74□□□□□ -0.37
CLN6-219ENST00000637329 TMEM230Q96A57 120 aa12.74□□□□□ -0.37
CLN6-219ENST00000637329 TMPRSS13Q9BYE2 586 aa12.74□□□□□ -0.37
CLN6-219ENST00000637329 LINC00574Q9H8X3 128 aa12.74□□□□□ -0.37
CLN6-219ENST00000637329 DUX4Q9UBX2 424 aa12.74□□□□□ -0.37
CLN6-219ENST00000637329 JPT1Q9UK76 154 aa12.74□□□□□ -0.37
CLN6-219ENST00000637329 UBE2J1Q9Y385 318 aaPredicted RBP12.74□□□□□ -0.37
CLN6-219ENST00000637329 LINC00312Q9Y6C7 94 aa12.74□□□□□ -0.37
CLN6-219ENST00000637329 ROS1P08922 2347 aa12.73□□□□□ -0.37
CLN6-219ENST00000637329 TRBV23-1A0A0A0MS06 115 aa12.73□□□□□ -0.37
CLN6-219ENST00000637329 TRAV39A0A0B4J263 110 aa12.73□□□□□ -0.37
CLN6-219ENST00000637329 hADV38S2A0JD32 116 aa12.73□□□□□ -0.37
CLN6-219ENST00000637329 C9orf170A2RU37 121 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms