RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 ROM1Q03395 351 aa11.65□□□□□ -0.54
SYNGAP1-208ENST00000629380 PSG5Q15238 335 aa11.65□□□□□ -0.54
SYNGAP1-208ENST00000629380 SPINK9Q5DT21 86 aa11.65□□□□□ -0.54
SYNGAP1-208ENST00000629380 OLIG3Q7RTU3 272 aa11.65□□□□□ -0.54
SYNGAP1-208ENST00000629380 PRSS42Q7Z5A4 293 aa11.65□□□□□ -0.54
SYNGAP1-208ENST00000629380 RIMKLAQ8IXN7 391 aa11.65□□□□□ -0.54
SYNGAP1-208ENST00000629380 ZBTB34Q8NCN2 500 aa11.65□□□□□ -0.55
SYNGAP1-208ENST00000629380 UBE2FQ969M7 185 aa11.65□□□□□ -0.55
SYNGAP1-208ENST00000629380 C20orf27Q9GZN8 174 aa11.65□□□□□ -0.55
SYNGAP1-208ENST00000629380 FAM157AC9JC47 383 aa11.64□□□□□ -0.55
SYNGAP1-208ENST00000629380 KLK8O60259 260 aa11.64□□□□□ -0.55
SYNGAP1-208ENST00000629380 RPL34P49207 117 aaKnown RBP11.64□□□□□ -0.55
SYNGAP1-208ENST00000629380 POM121Q96HA1 1249 aa11.64□□□□□ -0.55
SYNGAP1-208ENST00000629380 GABRG2P18507 467 aa11.64□□□□□ -0.55
SYNGAP1-208ENST00000629380 RPS20P60866 119 aaKnown RBP11.64□□□□□ -0.55
SYNGAP1-208ENST00000629380 SP6Q3SY56 376 aa11.64□□□□□ -0.55
SYNGAP1-208ENST00000629380 KIRREL2Q6UWL6 708 aa11.64□□□□□ -0.55
SYNGAP1-208ENST00000629380 OR6X1Q8NH79 312 aa11.64□□□□□ -0.55
SYNGAP1-208ENST00000629380 C11orf68Q9H3H3 251 aaKnown RBP11.64□□□□□ -0.55
SYNGAP1-208ENST00000629380 C5orf67F2Z3F1 127 aa11.64□□□□□ -0.55
SYNGAP1-208ENST00000629380 NMUP48645 174 aa11.64□□□□□ -0.55
SYNGAP1-208ENST00000629380 MRPS11P82912 194 aaKnown RBP11.64□□□□□ -0.55
SYNGAP1-208ENST00000629380 PAPPA-AS1Q5QFB9 102 aa11.64□□□□□ -0.55
SYNGAP1-208ENST00000629380 MRGPRGQ86SM5 289 aa11.64□□□□□ -0.55
SYNGAP1-208ENST00000629380 LPAR5Q9H1C0 372 aa11.64□□□□□ -0.55
SYNGAP1-208ENST00000629380 HPXP02790 462 aa11.64□□□□□ -0.55
SYNGAP1-208ENST00000629380 ZNF735P0CB33 412 aa11.64□□□□□ -0.55
SYNGAP1-208ENST00000629380 PTX4Q96A99 478 aa11.64□□□□□ -0.55
SYNGAP1-208ENST00000629380 SLC25A37Q9NYZ2 338 aa11.64□□□□□ -0.55
SYNGAP1-208ENST00000629380 LGALS3P17931 250 aaKnown RBP11.64□□□□□ -0.55
SYNGAP1-208ENST00000629380 ZNF683Q8IZ20 524 aa11.64□□□□□ -0.55
SYNGAP1-208ENST00000629380 PHLDA3Q9Y5J5 127 aa11.64□□□□□ -0.55
SYNGAP1-208ENST00000629380 RBFOX2O43251 390 aaKnown RBP eCLIP11.64□□□□□ -0.558e-7■■■■□ 24.2
SYNGAP1-208ENST00000629380 MT-ND6P03923 174 aa11.64□□□□□ -0.55
SYNGAP1-208ENST00000629380 GFERP55789 205 aa11.64□□□□□ -0.55
SYNGAP1-208ENST00000629380 IL17BQ9UHF5 180 aa11.64□□□□□ -0.55
SYNGAP1-208ENST00000629380 OR2W5A6NFC9 320 aa11.64□□□□□ -0.55
SYNGAP1-208ENST00000629380 TSPOP30536 169 aa11.64□□□□□ -0.55
SYNGAP1-208ENST00000629380 MRPL30Q8TCC3 161 aaKnown RBP11.64□□□□□ -0.55
SYNGAP1-208ENST00000629380 PLP1P60201 277 aa11.64□□□□□ -0.55
SYNGAP1-208ENST00000629380 ZNF117Q03924 483 aa11.64□□□□□ -0.55
SYNGAP1-208ENST00000629380 RNF122Q9H9V4 155 aa11.64□□□□□ -0.55
SYNGAP1-208ENST00000629380 DLK1P80370 383 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 FMODQ06828 376 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 ASB10Q8WXI3 467 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 GALNT14Q96FL9 552 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 HARBI1Q96MB7 349 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 HIST1H4GQ99525 98 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 YBX2Q9Y2T7 364 aaKnown RBP11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 H7C2G1 150 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 CA11O75493 328 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 GUCA2AQ02747 115 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 TMEM78Q5T7P6 136 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 RAB33BQ9H082 229 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 C9orf172C9J069 976 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 ARG1P05089 322 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 TEPPQ6URK8 271 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 OR51B2Q9Y5P1 312 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 TCRBV5S2A0A599 114 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 TMEM33P57088 247 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 OR4X1Q8NH49 305 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 PLXNB3Q9ULL4 1909 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 LOC107984156A0A0G2JMH3 177 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 CTXND1A0A1B0GTU2 59 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 NUDT3O95989 172 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 MAS1LP35410 378 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 ARL17AQ8IVW1 177 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 PDFQ9HBH1 243 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 IER3P46695 156 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 GABRA6Q16445 453 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 WDR38Q5JTN6 314 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 PRELID3AQ96N28 172 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 ZFP64Q9NPA5 681 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 DNAJB12Q9NXW2 375 aaKnown RBP11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 K7N7A8 449 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 ELOVL1Q9BW60 279 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 A8MWL6 223 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 DEFB124Q8NES8 71 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 FAM222BQ8WU58 562 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 LOXL4Q96JB6 756 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 PCOLCE2Q9UKZ9 415 aa11.63□□□□□ -0.55
SYNGAP1-208ENST00000629380 ZNF253O75346 499 aa11.62□□□□□ -0.55
SYNGAP1-208ENST00000629380 LIPGQ9Y5X9 500 aa11.62□□□□□ -0.55
SYNGAP1-208ENST00000629380 POM121BA6NF01 834 aa11.62□□□□□ -0.55
SYNGAP1-208ENST00000629380 SRD5A2P31213 254 aa11.62□□□□□ -0.55
SYNGAP1-208ENST00000629380 TXNDC17Q9BRA2 123 aa11.62□□□□□ -0.55
SYNGAP1-208ENST00000629380 TMEM56-RWDD3S4R434 201 aa11.62□□□□□ -0.55
SYNGAP1-208ENST00000629380 TRBV5-4A0A0C4DH59 114 aa11.62□□□□□ -0.55
SYNGAP1-208ENST00000629380 ZFPL1O95159 310 aa11.62□□□□□ -0.55
SYNGAP1-208ENST00000629380 WFDC5Q8TCV5 224 aa11.62□□□□□ -0.55
SYNGAP1-208ENST00000629380 MBD1Q9UIS9 605 aaPredicted RBP11.62□□□□□ -0.55
SYNGAP1-208ENST00000629380 ZNF345Q14585 488 aa11.62□□□□□ -0.55
SYNGAP1-208ENST00000629380 FAM131CQ96AQ9 280 aa11.62□□□□□ -0.55
SYNGAP1-208ENST00000629380 TSPAN32Q96QS1 320 aa11.62□□□□□ -0.55
SYNGAP1-208ENST00000629380 PLEKHB1Q9UF11 243 aaPredicted RBP11.62□□□□□ -0.55
SYNGAP1-208ENST00000629380 PLPP3O14495 311 aa11.62□□□□□ -0.55
SYNGAP1-208ENST00000629380 FAM157CP0CG43 387 aa11.62□□□□□ -0.55
SYNGAP1-208ENST00000629380 TMEM255AQ5JRV8 349 aa11.62□□□□□ -0.55
SYNGAP1-208ENST00000629380 WDFY1Q8IWB7 410 aa11.62□□□□□ -0.55
SYNGAP1-208ENST00000629380 ZMIZ1Q9ULJ6 1067 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms