RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 TAS2R30P59541 319 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 RPL15P61313 204 aaKnown RBP6.85□□□□□ -1.31
VPS11-209ENST00000622309 TFF2Q03403 129 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 ELAVL3Q14576 367 aaKnown RBP6.85□□□□□ -1.31
VPS11-209ENST00000622309 MRPL23Q16540 153 aaKnown RBP6.85□□□□□ -1.31
VPS11-209ENST00000622309 PLAC9Q5JTB6 97 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 ASTLQ6HA08 431 aaPredicted RBP6.85□□□□□ -1.31
VPS11-209ENST00000622309 CENPVQ7Z7K6 275 aaPredicted RBP6.85□□□□□ -1.31
VPS11-209ENST00000622309 SUMF1Q8NBK3 374 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 TMEM171Q8WVE6 324 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 GLMPQ8WWB7 406 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 DAZLQ92904 295 aaKnown RBP6.85□□□□□ -1.31
VPS11-209ENST00000622309 ARHGAP5-AS1Q96IT6 56 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 LRRC3BQ96PB8 259 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 AGMATQ9BSE5 352 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 MRPL27Q9P0M9 148 aaKnown RBP6.85□□□□□ -1.31
VPS11-209ENST00000622309 FBXL7Q9UJT9 491 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 ANAPC10Q9UM13 185 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 ZNF737O75373 536 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 EFEMP2O95967 443 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 GYPAP02724 150 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 LGALS7P47929 136 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 PLPPR5Q32ZL2 321 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 GLIPR1L1Q6UWM5 242 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 TMEM144Q7Z5S9 345 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 OR4N5Q8IXE1 308 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 TMEM252Q8N6L7 170 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 TMEM59Q9BXS4 323 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 YAE1D1Q9NRH1 226 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 ELOVL5Q9NYP7 299 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 PLA2G3Q9NZ20 509 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 WNT6Q9Y6F9 365 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 IGHV2-26A0A0B4J1V2 119 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 SSSCA1O60232 199 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 RAD51DO75771 328 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 NKX2-1P43699 371 aaPredicted RBP6.85□□□□□ -1.31
VPS11-209ENST00000622309 SLC6A8P48029 635 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 CSNK1G2P78368 415 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 QRFPP83859 136 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 PLAURQ03405 335 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 TESK1Q15569 626 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 RAET1LQ5VY80 246 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 ABHD17CQ6PCB6 329 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 Q6ZNB5 142 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 ZNF440Q8IYI8 595 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 KCNG3Q8TAE7 436 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 SCGB1C1Q8TD33 95 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 FAM222BQ8WU58 562 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 RTN4IP1Q8WWV3 396 aaPredicted RBP6.85□□□□□ -1.31
VPS11-209ENST00000622309 NAA60Q9H7X0 242 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 G6PC2Q9NQR9 355 aa6.85□□□□□ -1.31
VPS11-209ENST00000622309 COL4A6Q14031 1691 aa6.84□□□□□ -1.31
VPS11-209ENST00000622309 MYO15AQ9UKN7 3530 aa6.84□□□□□ -1.31
VPS11-209ENST00000622309 TMEM14DPA8MWL7 114 aa6.84□□□□□ -1.31
VPS11-209ENST00000622309 P2RY10O00398 339 aa6.84□□□□□ -1.31
VPS11-209ENST00000622309 SH2D1BO14796 132 aa6.84□□□□□ -1.31
VPS11-209ENST00000622309 ZNF253O75346 499 aa6.84□□□□□ -1.31
VPS11-209ENST00000622309 TNFSF15O95150 251 aa6.84□□□□□ -1.31
VPS11-209ENST00000622309 EMDP50402 254 aa6.84□□□□□ -1.31
VPS11-209ENST00000622309 FAM71F2Q6NXP2 309 aa6.84□□□□□ -1.31
VPS11-209ENST00000622309 OR1N2Q8NGR9 330 aa6.84□□□□□ -1.31
VPS11-209ENST00000622309 SCARF2Q96GP6 870 aaPredicted RBP6.84□□□□□ -1.31
VPS11-209ENST00000622309 GPX7Q96SL4 187 aaPredicted RBP6.84□□□□□ -1.31
VPS11-209ENST00000622309 TIMM29Q9BSF4 260 aa6.84□□□□□ -1.31
VPS11-209ENST00000622309 WNT10AQ9GZT5 417 aa6.84□□□□□ -1.31
VPS11-209ENST00000622309 RPRMQ9NS64 109 aa6.84□□□□□ -1.31
VPS11-209ENST00000622309 VDAC3Q9Y277 283 aa6.84□□□□□ -1.31
VPS11-209ENST00000622309 SNRNP200O75643 2136 aaKnown RBP6.84□□□□□ -1.31
VPS11-209ENST00000622309 NUP210Q8TEM1 1887 aaPredicted RBP6.84□□□□□ -1.31
VPS11-209ENST00000622309 OR2T8A6NH00 312 aa6.84□□□□□ -1.31
VPS11-209ENST00000622309 SRPXP78539 464 aa6.84□□□□□ -1.31
VPS11-209ENST00000622309 TLE1Q04724 770 aa6.84□□□□□ -1.31
VPS11-209ENST00000622309 TMEM187Q14656 261 aa6.84□□□□□ -1.31
VPS11-209ENST00000622309 LIAT1Q6ZQX7 453 aa6.84□□□□□ -1.31
VPS11-209ENST00000622309 BHLHA15Q7RTS1 189 aaPredicted RBP6.84□□□□□ -1.31
VPS11-209ENST00000622309 TCF23Q7RTU1 214 aa6.84□□□□□ -1.31
VPS11-209ENST00000622309 COMMD2Q86X83 199 aa6.84□□□□□ -1.31
VPS11-209ENST00000622309 ARHGEF39Q8N4T4 335 aa6.84□□□□□ -1.31
VPS11-209ENST00000622309 OR2Y1Q8NGV0 311 aa6.84□□□□□ -1.31
VPS11-209ENST00000622309 KLHL13Q9P2N7 655 aa6.84□□□□□ -1.31
VPS11-209ENST00000622309 COL4A3Q01955 1670 aa6.84□□□□□ -1.32
VPS11-209ENST00000622309 CNTRLQ7Z7A1 2325 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 DPRXA6NFQ7 191 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 NPIPA5E9PKD4 350 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 NPIPA3F8WFD2 350 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 G3V4G9 280 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 AMTP48728 403 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 MEF2BQ02080 365 aaPredicted RBP6.83□□□□□ -1.32
VPS11-209ENST00000622309 RAB31Q13636 194 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 HIST3H3Q16695 136 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 LY6G5CQ5SRR4 150 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 TSPO2Q5TGU0 170 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 PARS2Q7L3T8 475 aaKnown RBP6.83□□□□□ -1.32
VPS11-209ENST00000622309 C20orf196Q8IYI0 205 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 SMIM20Q8N5G0 67 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 CDRT4Q8N9R6 151 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 FER1L6-AS1Q8NA97 138 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 OR5D14Q8NGL3 314 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 SPACA5Q96QH8 159 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 RSG1Q9BU20 258 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms