RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 PURGQ9UJV8 347 aaKnown RBP10.5□□□□□ -0.73
CIITA-212ENST00000618207 TPRP12270 2363 aaKnown RBP10.5□□□□□ -0.73
CIITA-212ENST00000618207 M0R1B8 84 aa10.5□□□□□ -0.73
CIITA-212ENST00000618207 WRBO00258 174 aa10.5□□□□□ -0.73
CIITA-212ENST00000618207 ADAM20O43506 726 aa10.5□□□□□ -0.73
CIITA-212ENST00000618207 PSPNO60542 156 aa10.5□□□□□ -0.73
CIITA-212ENST00000618207 OR8U9P0C7N5 309 aa10.5□□□□□ -0.73
CIITA-212ENST00000618207 CAV2P51636 162 aa10.5□□□□□ -0.73
CIITA-212ENST00000618207 UCP3P55916 312 aa10.5□□□□□ -0.73
CIITA-212ENST00000618207 LRP11Q86VZ4 500 aa10.5□□□□□ -0.73
CIITA-212ENST00000618207 BPIFCQ8NFQ6 507 aa10.5□□□□□ -0.73
CIITA-212ENST00000618207 OR8U1Q8NH10 309 aa10.5□□□□□ -0.73
CIITA-212ENST00000618207 ZNF71Q9NQZ8 489 aaPredicted RBP10.5□□□□□ -0.73
CIITA-212ENST00000618207 RNF150Q9ULK6 438 aa10.5□□□□□ -0.73
CIITA-212ENST00000618207 POLDIP2Q9Y2S7 368 aa10.5□□□□□ -0.73
CIITA-212ENST00000618207 AMDHD2Q9Y303 409 aa10.5□□□□□ -0.73
CIITA-212ENST00000618207 IGHV1-18A0A0C4DH31 117 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 A0A1B0GV50 99 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 A0A1B0GW55 424 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 AHRRA9YTQ3 701 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 CNOT4O95628 575 aaKnown RBP10.49□□□□□ -0.73
CIITA-212ENST00000618207 DUX4L2P0CJ85 424 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 DUX4L3P0CJ86 424 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 DUX4L4P0CJ87 422 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 DUX4L5P0CJ88 424 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 DUX4L6P0CJ89 424 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 DUX4L7P0CJ90 424 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 LYL1P12980 280 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 GCH1P30793 250 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 HLA-DRB3P79483 266 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 AESQ08117 197 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 CXorf66Q5JRM2 361 aaPredicted RBP10.49□□□□□ -0.73
CIITA-212ENST00000618207 ATRAIDQ6UW56 229 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 Q6ZR03 302 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 HSD17B13Q7Z5P4 300 aaPredicted RBP10.49□□□□□ -0.73
CIITA-212ENST00000618207 CMTM1Q8IZ96 169 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 TMEM222Q9H0R3 208 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 PLSCR4Q9NRQ2 329 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 DUX4Q9UBX2 424 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 BSNQ9UPA5 3926 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 FAM24AA6NFZ4 105 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 IQCF6A8MYZ5 107 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 COX5AP20674 150 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 BMP5P22003 454 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 FOXC1Q12948 553 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 CLINT1Q14677 625 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 BHLHA15Q7RTS1 189 aaPredicted RBP10.49□□□□□ -0.73
CIITA-212ENST00000618207 ASCL5Q7RTU5 278 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 HSD17B11Q8NBQ5 300 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 CLRN3Q8NCR9 226 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 RNASE11Q8TAA1 199 aaKnown RBP10.49□□□□□ -0.73
CIITA-212ENST00000618207 STOML3Q8TAV4 291 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 RNF141Q8WVD5 230 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 PLSCR2Q9NRY7 297 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 DNAJB11Q9UBS4 358 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 ZDHHC8Q9ULC8 765 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 RFNGQ9Y644 331 aa10.49□□□□□ -0.73
CIITA-212ENST00000618207 IGHV2OR16-5A0A0B4J2B6 119 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 H7C1Q1 480 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 ABCD4O14678 606 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 SH2D1BO14796 132 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 ST8SIA3O43173 380 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 SSSCA1O60232 199 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 MED6O75586 246 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 PGA5P0DJD9 388 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 PMELP40967 661 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 KCNJ3P48549 501 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 IL13RA2Q14627 380 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 LTC4SQ16873 150 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 AARDQ4LEZ3 155 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 C16orf54Q6UWD8 224 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 RBMXL3Q8N7X1 1067 aaKnown RBP10.48□□□□□ -0.73
CIITA-212ENST00000618207 OR8G5Q8NG78 346 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 OR2Z1Q8NG97 314 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 NRIP2Q9BQI9 281 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 MED9Q9NWA0 146 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 METRNQ9UJH8 293 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 OR2W1Q9Y3N9 320 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 H3BP45 60 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 KALRNO60229 2985 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 PGLYRP1O75594 196 aaPredicted RBP10.48□□□□□ -0.73
CIITA-212ENST00000618207 CEACAM4O75871 244 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 HAND1O96004 215 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 PSG2P11465 335 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 OR2B11Q5JQS5 317 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 ZNF474Q6S9Z5 364 aaPredicted RBP10.48□□□□□ -0.73
CIITA-212ENST00000618207 SELENOHQ8IZQ5 122 aaKnown RBP10.48□□□□□ -0.73
CIITA-212ENST00000618207 RFESDQ8TAC1 157 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 NANPQ8TBE9 248 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 S100PBPQ96BU1 408 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 ZNF251Q9BRH9 671 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 LRFN3Q9BTN0 628 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 FAM96BQ9Y3D0 163 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 FAM215AQ9Y5M1 114 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 ATRXP46100 2492 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 OR5H1A6NKK0 313 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 KRBOX1C9JBD0 128 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 E5RGE8 158 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 TUSC2O75896 110 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 GABRA2P47869 451 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms