RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 SUCNR1Q9BXA5 334 aa12.78□□□□□ -0.36
PCDHGC3-204ENST00000617222 HEXA-AS1Q9H8Q6 139 aa12.78□□□□□ -0.36
PCDHGC3-204ENST00000617222 UNKLQ9H9P5 680 aaKnown RBP12.78□□□□□ -0.36
PCDHGC3-204ENST00000617222 ZANQ9Y493 2812 aa12.78□□□□□ -0.36
PCDHGC3-204ENST00000617222 TRDCB7Z8K6 153 aa12.77□□□□□ -0.37
PCDHGC3-204ENST00000617222 RNASEK-C17orf49H0YIS7 233 aa12.77□□□□□ -0.37
PCDHGC3-204ENST00000617222 TPPPO94811 219 aa12.77□□□□□ -0.37
PCDHGC3-204ENST00000617222 FCER2P06734 321 aa12.77□□□□□ -0.37
PCDHGC3-204ENST00000617222 SCTP09683 121 aa12.77□□□□□ -0.37
PCDHGC3-204ENST00000617222 HOXB4P17483 251 aaPredicted RBP12.77□□□□□ -0.37
PCDHGC3-204ENST00000617222 COX7A1P24310 79 aa12.77□□□□□ -0.37
PCDHGC3-204ENST00000617222 FPR2P25090 351 aa12.77□□□□□ -0.37
PCDHGC3-204ENST00000617222 HLA-DRB3P79483 266 aa12.77□□□□□ -0.37
PCDHGC3-204ENST00000617222 RNASE12Q5GAN4 147 aaKnown RBP12.77□□□□□ -0.37
PCDHGC3-204ENST00000617222 FAM131AQ6UXB0 335 aa12.77□□□□□ -0.37
PCDHGC3-204ENST00000617222 IL17RELQ6ZVW7 336 aa12.77□□□□□ -0.37
PCDHGC3-204ENST00000617222 GVQW1Q8N7I0 195 aa12.77□□□□□ -0.37
PCDHGC3-204ENST00000617222 NANPQ8TBE9 248 aa12.77□□□□□ -0.37
PCDHGC3-204ENST00000617222 C15orf40Q8WUR7 153 aa12.77□□□□□ -0.37
PCDHGC3-204ENST00000617222 KIRREL1Q96J84 757 aa12.77□□□□□ -0.37
PCDHGC3-204ENST00000617222 SOSTQ9BQB4 213 aa12.77□□□□□ -0.37
PCDHGC3-204ENST00000617222 OCSTAMPQ9BR26 566 aa12.77□□□□□ -0.37
PCDHGC3-204ENST00000617222 RAB9BQ9NP90 201 aa12.77□□□□□ -0.37
PCDHGC3-204ENST00000617222 TMEM160Q9NX00 188 aa12.77□□□□□ -0.37
PCDHGC3-204ENST00000617222 IGKV1D-8A0A087WSZ0 117 aa12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 IGHV3-43A0A0B4J1X8 118 aa12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 CENPVL3A0A0U1RRI6 287 aa12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 A0A1W2PRD5 423 aa12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 A0A1W2PRF3 423 aa12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 A0A1W2PRM7 423 aa12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 FAM172BPA6NC97 362 aa12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 F2RL2O00254 374 aa12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 SDCBPO00560 298 aaPredicted RBP12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 GSTT2P0CG29 244 aa12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 GSTT2BP0CG30 244 aa12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 IGHV3-43DP0DP04 118 aa12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 IGHV4-38-2P0DP08 117 aa12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 CBX5P45973 191 aa12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 SRSF7Q16629 238 aaKnown RBP eCLIP12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 KLF17Q5JT82 389 aaPredicted RBP12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 UTF1Q5T230 341 aa12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 NCR3LG1Q68D85 454 aa12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 OR52W1Q6IF63 320 aa12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 PYHIN1Q6K0P9 492 aa12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 HCP5Q6MZN7 132 aa12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 FAM53AQ6NSI3 398 aaPredicted RBP12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 CCDC190Q86UF4 302 aa12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 PNKDQ8N490 385 aa12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 OR10A7Q8NGE5 316 aa12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 OR52L2PQ8NGH6 319 aa12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 GPX8Q8TED1 209 aa12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 IL1F10Q8WWZ1 152 aa12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 GALMQ96C23 342 aa12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 TMEM133Q9H2Q1 129 aa12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 SCPEP1Q9HB40 452 aa12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 ZNF286AQ9HBT8 521 aa12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 PTTG2Q9NZH5 202 aa12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 RABL2AQ9UBK7 228 aaPredicted RBP12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 RABL2BQ9UNT1 228 aa12.76□□□□□ -0.37
PCDHGC3-204ENST00000617222 TRAV40A0A0B4J280 105 aa12.75□□□□□ -0.37
PCDHGC3-204ENST00000617222 SULT1C2O00338 296 aa12.75□□□□□ -0.37
PCDHGC3-204ENST00000617222 FABP7O15540 132 aa12.75□□□□□ -0.37
PCDHGC3-204ENST00000617222 IGHV3-7P01780 117 aa12.75□□□□□ -0.37
PCDHGC3-204ENST00000617222 LPLP06858 475 aa12.75□□□□□ -0.37
PCDHGC3-204ENST00000617222 HNF1AP20823 631 aa12.75□□□□□ -0.37
PCDHGC3-204ENST00000617222 HIVEP2P31629 2446 aa12.75□□□□□ -0.37
PCDHGC3-204ENST00000617222 SRP14P37108 136 aaKnown RBP12.75□□□□□ -0.37
PCDHGC3-204ENST00000617222 KIR2DS4P43632 304 aa12.75□□□□□ -0.37
PCDHGC3-204ENST00000617222 LOXL3P58215 753 aa12.75□□□□□ -0.37
PCDHGC3-204ENST00000617222 KIR2DS1Q14954 304 aa12.75□□□□□ -0.37
PCDHGC3-204ENST00000617222 GPR157Q5UAW9 335 aa12.75□□□□□ -0.37
PCDHGC3-204ENST00000617222 Q6ZS49 121 aa12.75□□□□□ -0.37
PCDHGC3-204ENST00000617222 HOGA1Q86XE5 327 aa12.75□□□□□ -0.37
PCDHGC3-204ENST00000617222 ABHD12Q8N2K0 398 aa12.75□□□□□ -0.37
PCDHGC3-204ENST00000617222 TEX29Q8N6K0 151 aa12.75□□□□□ -0.37
PCDHGC3-204ENST00000617222 OR10V1Q8NGI7 309 aa12.75□□□□□ -0.37
PCDHGC3-204ENST00000617222 OR52M1Q8NGK5 317 aa12.75□□□□□ -0.37
PCDHGC3-204ENST00000617222 OR13D1Q8NGV5 346 aa12.75□□□□□ -0.37
PCDHGC3-204ENST00000617222 OR52I2Q8NH67 350 aa12.75□□□□□ -0.37
PCDHGC3-204ENST00000617222 LEAP2Q969E1 77 aa12.75□□□□□ -0.37
PCDHGC3-204ENST00000617222 IFT46Q9NQC8 304 aa12.75□□□□□ -0.37
PCDHGC3-204ENST00000617222 OR2S2Q9NQN1 319 aa12.75□□□□□ -0.37
PCDHGC3-204ENST00000617222 GFOD1Q9NXC2 390 aa12.75□□□□□ -0.37
PCDHGC3-204ENST00000617222 GNG12Q9UBI6 72 aa12.75□□□□□ -0.37
PCDHGC3-204ENST00000617222 DSCAML1Q8TD84 2053 aa12.74□□□□□ -0.37
PCDHGC3-204ENST00000617222 CELSR1Q9NYQ6 3014 aa12.74□□□□□ -0.37
PCDHGC3-204ENST00000617222 IGHV1-69DA0A0B4J2H0 117 aa12.74□□□□□ -0.37
PCDHGC3-204ENST00000617222 INAFM1C9JVW0 142 aa12.74□□□□□ -0.37
PCDHGC3-204ENST00000617222 FSHBP01225 129 aa12.74□□□□□ -0.37
PCDHGC3-204ENST00000617222 IGHV1-69P01742 117 aa12.74□□□□□ -0.37
PCDHGC3-204ENST00000617222 HTD2P86397 168 aa12.74□□□□□ -0.37
PCDHGC3-204ENST00000617222 DGCR2P98153 550 aa12.74□□□□□ -0.37
PCDHGC3-204ENST00000617222 SPANXN2Q5MJ10 180 aa12.74□□□□□ -0.37
PCDHGC3-204ENST00000617222 BEST4Q8NFU0 473 aa12.74□□□□□ -0.37
PCDHGC3-204ENST00000617222 OR4A4PQ8NGN8 299 aa12.74□□□□□ -0.37
PCDHGC3-204ENST00000617222 FCAMRQ8WWV6 532 aa12.74□□□□□ -0.37
PCDHGC3-204ENST00000617222 CLEC7AQ9BXN2 247 aa12.74□□□□□ -0.37
PCDHGC3-204ENST00000617222 BEX2Q9BXY8 128 aa12.74□□□□□ -0.37
PCDHGC3-204ENST00000617222 NUP50Q9UKX7 468 aa12.74□□□□□ -0.37
PCDHGC3-204ENST00000617222 V9GYH0 126 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms