RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 TICRRQ7Z2Z1 1910 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 BCL2L11O43521 198 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 ONECUT2O95948 504 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 FCGR3AP08637 254 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 FOSL1P15407 271 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 F2RP25116 425 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 SLC38A11Q08AI6 406 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 TIGITQ495A1 244 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 TOR2AQ5JU69 321 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 ABHD14AQ9BUJ0 271 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 KPTNQ9Y664 436 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 TCF20Q9UGU0 1960 aaKnown RBP8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 TMEM41BQ5BJD5 291 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 ZNF787Q6DD87 383 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 LIAT1Q6ZQX7 453 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 NEU4Q8WWR8 484 aaPredicted RBP8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 DYRK2Q92630 601 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 FRMPD3Q5JV73 1810 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 ZNF785A8K8V0 405 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 GOSR1O95249 250 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 CYB5R3P00387 301 aaPredicted RBP8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 CST4P01036 141 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 GAPDHP04406 335 aaKnown RBP8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 ARG1P05089 322 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 PPP1CCP36873 323 aaKnown RBP8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 FLI1Q01543 452 aaPredicted RBP8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 ATP6V1FQ16864 119 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 ACACAQ13085 2346 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 A1L4Q6 167 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 PINLYPA6NC86 204 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 UMAD1C9J7I0 102 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 SEMA7AO75326 666 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 SPNP16150 400 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 TMEM30BQ3MIR4 351 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 TCTE3Q8IZS6 198 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 MESP1Q9BRJ9 268 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 C20orf24Q9BUV8 137 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 LPAR5Q9H1C0 372 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 SLC25A32Q9H2D1 315 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 Q9N2K0 584 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 SLC2A9Q9NRM0 540 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 COA4Q9NYJ1 87 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 V9GYH0 126 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 CLN5O75503 358 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 HBZP02008 142 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 MT-ND4LP03901 98 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 ST3GAL2Q16842 350 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 OR52L2PQ8NGH6 319 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 C14orf79Q96F83 325 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 MARVELD1Q9BSK0 173 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 SPRR3Q9UBC9 169 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 URGCP-MRPS24S4R325 110 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 IGHV2OR16-5A0A0B4J2B6 119 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 FOXH1O75593 365 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 NDUFA6P56556 154 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 BSPH1Q075Z2 132 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 HABP2Q14520 560 aaPredicted RBP8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 MMDQ15546 238 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 ZNF385CQ66K41 422 aaPredicted RBP8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 SEZ6L2Q6UXD5 910 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 OR10Z1Q8NGY1 313 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 NKX6-2Q9C056 277 aaPredicted RBP8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 ODAMA1E959 279 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 FBP1P09467 338 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 SLC6A1P30531 599 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 EXOSC2Q13868 293 aaKnown RBP8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 CLEC18BQ6UXF7 455 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 TMEM123Q8N131 208 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 TPRX1Q8N7U7 411 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 DUSP18Q8NEJ0 188 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 ZNF680Q8NEM1 530 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 OR5P3Q8WZ94 311 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 POM121Q96HA1 1249 aa8.12□□□□□ -1.11
CLTCL1-208ENST00000615606 NLRC5Q86WI3 1866 aa8.11□□□□□ -1.11
CLTCL1-208ENST00000615606 PPP1R2P9O14990 202 aa8.11□□□□□ -1.11
CLTCL1-208ENST00000615606 NPIPB7O75200 414 aa8.11□□□□□ -1.11
CLTCL1-208ENST00000615606 OPN1MWP04001 364 aa8.11□□□□□ -1.11
CLTCL1-208ENST00000615606 OPN1MW2P0DN77 364 aa8.11□□□□□ -1.11
CLTCL1-208ENST00000615606 OPN1MW3P0DN78 364 aa8.11□□□□□ -1.11
CLTCL1-208ENST00000615606 MC5RP33032 325 aa8.11□□□□□ -1.11
CLTCL1-208ENST00000615606 SSTP61278 116 aa8.11□□□□□ -1.11
CLTCL1-208ENST00000615606 CD200R1LQ6Q8B3 271 aa8.11□□□□□ -1.11
CLTCL1-208ENST00000615606 UNQ9370/PRO34162Q6UXP9 181 aa8.11□□□□□ -1.11
CLTCL1-208ENST00000615606 FAM219AQ8IW50 185 aa8.11□□□□□ -1.11
CLTCL1-208ENST00000615606 ZNF561Q8N587 486 aa8.11□□□□□ -1.11
CLTCL1-208ENST00000615606 HDHD3Q9BSH5 251 aaPredicted RBP8.11□□□□□ -1.11
CLTCL1-208ENST00000615606 LMX1BO60663 402 aa8.11□□□□□ -1.11
CLTCL1-208ENST00000615606 MUC1P15941 1255 aaPredicted RBP8.11□□□□□ -1.11
CLTCL1-208ENST00000615606 TIMP3P35625 211 aa8.11□□□□□ -1.11
CLTCL1-208ENST00000615606 PTGDSP41222 190 aa8.11□□□□□ -1.11
CLTCL1-208ENST00000615606 UBE2G2P60604 165 aa8.11□□□□□ -1.11
CLTCL1-208ENST00000615606 NHLH1Q02575 133 aa8.11□□□□□ -1.11
CLTCL1-208ENST00000615606 IL24Q13007 206 aa8.11□□□□□ -1.11
CLTCL1-208ENST00000615606 RAB32Q13637 225 aa8.11□□□□□ -1.11
CLTCL1-208ENST00000615606 OR2C3Q8N628 320 aa8.11□□□□□ -1.11
CLTCL1-208ENST00000615606 RELL2Q8NC24 303 aaPredicted RBP8.11□□□□□ -1.11
CLTCL1-208ENST00000615606 ZNF439Q8NDP4 499 aa8.11□□□□□ -1.11
CLTCL1-208ENST00000615606 TMEM104Q8NE00 496 aa8.11□□□□□ -1.11
CLTCL1-208ENST00000615606 SNRNP40Q96DI7 357 aaKnown RBP8.11□□□□□ -1.11
CLTCL1-208ENST00000615606 MEGF10Q96KG7 1140 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms