RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 PARP12Q9H0J9 701 aaKnown RBP11.27□□□□□ -0.61
FOXN3-219ENST00000615335 METTL8Q9H825 291 aaKnown RBP11.27□□□□□ -0.61
FOXN3-219ENST00000615335 OSGIN2Q9Y236 505 aa11.27□□□□□ -0.61
FOXN3-219ENST00000615335 A0A0U1RQV5 110 aa11.26□□□□□ -0.61
FOXN3-219ENST00000615335 AQP7P3A6NL99 342 aa11.26□□□□□ -0.61
FOXN3-219ENST00000615335 OPN1MWP04001 364 aa11.26□□□□□ -0.61
FOXN3-219ENST00000615335 OPN1MW2P0DN77 364 aa11.26□□□□□ -0.61
FOXN3-219ENST00000615335 OPN1MW3P0DN78 364 aa11.26□□□□□ -0.61
FOXN3-219ENST00000615335 GNB3P16520 340 aa11.26□□□□□ -0.61
FOXN3-219ENST00000615335 HRH1P35367 487 aa11.26□□□□□ -0.61
FOXN3-219ENST00000615335 TMEM33P57088 247 aa11.26□□□□□ -0.61
FOXN3-219ENST00000615335 MRPL41Q8IXM3 137 aaKnown RBP11.26□□□□□ -0.61
FOXN3-219ENST00000615335 Q8NA96 180 aa11.26□□□□□ -0.61
FOXN3-219ENST00000615335 BHLHE23Q8NDY6 225 aa11.26□□□□□ -0.61
FOXN3-219ENST00000615335 OR13C9Q8NGT0 318 aa11.26□□□□□ -0.61
FOXN3-219ENST00000615335 C20orf144Q9BQM9 153 aa11.26□□□□□ -0.61
FOXN3-219ENST00000615335 SRD5A3Q9H8P0 318 aa11.26□□□□□ -0.61
FOXN3-219ENST00000615335 KLHL13Q9P2N7 655 aa11.26□□□□□ -0.61
FOXN3-219ENST00000615335 SLC5A6Q9Y289 635 aa11.26□□□□□ -0.61
FOXN3-219ENST00000615335 XKRY2A2RUG3 117 aa11.26□□□□□ -0.61
FOXN3-219ENST00000615335 ZNHIT1O43257 154 aa11.26□□□□□ -0.61
FOXN3-219ENST00000615335 DNPH1O43598 174 aa11.26□□□□□ -0.61
FOXN3-219ENST00000615335 MMP7P09237 267 aaPredicted RBP11.26□□□□□ -0.61
FOXN3-219ENST00000615335 RAB7AP51149 207 aa11.26□□□□□ -0.61
FOXN3-219ENST00000615335 HOGA1Q86XE5 327 aa11.26□□□□□ -0.61
FOXN3-219ENST00000615335 CISD2Q8N5K1 135 aaKnown RBP11.26□□□□□ -0.61
FOXN3-219ENST00000615335 TMEM104Q8NE00 496 aa11.26□□□□□ -0.61
FOXN3-219ENST00000615335 OR4X1Q8NH49 305 aa11.26□□□□□ -0.61
FOXN3-219ENST00000615335 ORAOV1Q8WV07 137 aa11.26□□□□□ -0.61
FOXN3-219ENST00000615335 SCGB3A2Q96PL1 93 aa11.26□□□□□ -0.61
FOXN3-219ENST00000615335 FKBP11Q9NYL4 201 aa11.26□□□□□ -0.61
FOXN3-219ENST00000615335 POLR3KQ9Y2Y1 108 aaPredicted RBP11.26□□□□□ -0.61
FOXN3-219ENST00000615335 NPIPA2E9PIF3 369 aa11.25□□□□□ -0.61
FOXN3-219ENST00000615335 NPIPA3F8WFD2 350 aa11.25□□□□□ -0.61
FOXN3-219ENST00000615335 HPRT1P00492 218 aa11.25□□□□□ -0.61
FOXN3-219ENST00000615335 HSPB1P04792 205 aaKnown RBP11.25□□□□□ -0.61
FOXN3-219ENST00000615335 SRP19P09132 144 aaKnown RBP11.25□□□□□ -0.61
FOXN3-219ENST00000615335 SELEP16581 610 aa11.25□□□□□ -0.61
FOXN3-219ENST00000615335 ZNF20P17024 532 aa11.25□□□□□ -0.61
FOXN3-219ENST00000615335 ZNF43P17038 809 aa11.25□□□□□ -0.61
FOXN3-219ENST00000615335 PTTG1IPP53801 180 aa11.25□□□□□ -0.61
FOXN3-219ENST00000615335 PNRC1Q12796 327 aaPredicted RBP11.25□□□□□ -0.61
FOXN3-219ENST00000615335 OR8G2PQ6IF36 304 aa11.25□□□□□ -0.61
FOXN3-219ENST00000615335 UEVLDQ8IX04 471 aa11.25□□□□□ -0.61
FOXN3-219ENST00000615335 OR10S1Q8NGN2 331 aa11.25□□□□□ -0.61
FOXN3-219ENST00000615335 WDYHV1Q96HA8 205 aa11.25□□□□□ -0.61
FOXN3-219ENST00000615335 B3GAT1Q9P2W7 334 aa11.25□□□□□ -0.61
FOXN3-219ENST00000615335 GTF3C1Q12789 2109 aa11.25□□□□□ -0.61
FOXN3-219ENST00000615335 A0A1W2PNV4 684 aa11.25□□□□□ -0.61
FOXN3-219ENST00000615335 AQP7O14520 342 aa11.25□□□□□ -0.61
FOXN3-219ENST00000615335 VAMP5O95183 116 aa11.25□□□□□ -0.61
FOXN3-219ENST00000615335 SCGB1D1O95968 90 aa11.25□□□□□ -0.61
FOXN3-219ENST00000615335 ZNF93P35789 620 aaPredicted RBP11.25□□□□□ -0.61
FOXN3-219ENST00000615335 HLA-DRB3P79483 266 aa11.25□□□□□ -0.61
FOXN3-219ENST00000615335 FAM219AQ8IW50 185 aa11.25□□□□□ -0.61
FOXN3-219ENST00000615335 ZNF100Q8IYN0 542 aa11.25□□□□□ -0.61
FOXN3-219ENST00000615335 OXGR1Q96P68 337 aa11.25□□□□□ -0.61
FOXN3-219ENST00000615335 NUDT16L1Q9BRJ7 211 aaKnown RBP11.25□□□□□ -0.61
FOXN3-219ENST00000615335 PLSCR2Q9NRY7 297 aa11.25□□□□□ -0.61
FOXN3-219ENST00000615335 FBLN5Q9UBX5 448 aa11.25□□□□□ -0.61
FOXN3-219ENST00000615335 POLR1DQ9Y2S0 133 aa11.25□□□□□ -0.61
FOXN3-219ENST00000615335 RP1L1Q8IWN7 2480 aaPredicted RBP11.25□□□□□ -0.61
FOXN3-219ENST00000615335 TMEM14DPA8MWL7 114 aa11.24□□□□□ -0.61
FOXN3-219ENST00000615335 H0YL77 283 aa11.24□□□□□ -0.61
FOXN3-219ENST00000615335 SERPINA2P20848 420 aa11.24□□□□□ -0.61
FOXN3-219ENST00000615335 P2RY1P47900 373 aa11.24□□□□□ -0.61
FOXN3-219ENST00000615335 CLRN1P58418 232 aa11.24□□□□□ -0.61
FOXN3-219ENST00000615335 C16orf54Q6UWD8 224 aa11.24□□□□□ -0.61
FOXN3-219ENST00000615335 PLXDC2Q6UX71 529 aa11.24□□□□□ -0.61
FOXN3-219ENST00000615335 CLEC18BQ6UXF7 455 aa11.24□□□□□ -0.61
FOXN3-219ENST00000615335 OR2AJ1Q8NGZ0 328 aa11.24□□□□□ -0.61
FOXN3-219ENST00000615335 OR51E1Q8TCB6 317 aa11.24□□□□□ -0.61
FOXN3-219ENST00000615335 SARAFQ96BY9 339 aa11.24□□□□□ -0.61
FOXN3-219ENST00000615335 OR10C1Q96KK4 312 aa11.24□□□□□ -0.61
FOXN3-219ENST00000615335 PRRG4Q9BZD6 226 aa11.24□□□□□ -0.61
FOXN3-219ENST00000615335 NAGKQ9UJ70 344 aa11.24□□□□□ -0.61
FOXN3-219ENST00000615335 SH3BGRL2Q9UJC5 107 aa11.24□□□□□ -0.61
FOXN3-219ENST00000615335 MCTS1Q9ULC4 181 aaKnown RBP11.24□□□□□ -0.61
FOXN3-219ENST00000615335 SYNGR4O95473 234 aa11.24□□□□□ -0.61
FOXN3-219ENST00000615335 LCATP04180 440 aa11.24□□□□□ -0.61
FOXN3-219ENST00000615335 CHRNB4P30926 498 aa11.24□□□□□ -0.61
FOXN3-219ENST00000615335 LY6DQ14210 128 aa11.24□□□□□ -0.61
FOXN3-219ENST00000615335 COMMD2Q86X83 199 aa11.24□□□□□ -0.61
FOXN3-219ENST00000615335 OR2D3Q8NGH3 330 aa11.24□□□□□ -0.61
FOXN3-219ENST00000615335 MARCH1Q8TCQ1 289 aa11.24□□□□□ -0.61
FOXN3-219ENST00000615335 ALKBH3Q96Q83 286 aaPredicted RBP11.24□□□□□ -0.61
FOXN3-219ENST00000615335 HIST1H2AAQ96QV6 131 aa11.24□□□□□ -0.61
FOXN3-219ENST00000615335 RARRES2Q99969 163 aa11.24□□□□□ -0.61
FOXN3-219ENST00000615335 PCGF1Q9BSM1 259 aa11.24□□□□□ -0.61
FOXN3-219ENST00000615335 MRPL13Q9BYD1 178 aaKnown RBP11.24□□□□□ -0.61
FOXN3-219ENST00000615335 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.24□□□□□ -0.612e-6■■■■■ 35.4
FOXN3-219ENST00000615335 KIAA1456Q9P272 454 aa11.24□□□□□ -0.61
FOXN3-219ENST00000615335 USP24Q9UPU5 2620 aa11.23□□□□□ -0.61
FOXN3-219ENST00000615335 ZNF878C9JN71 531 aa11.23□□□□□ -0.61
FOXN3-219ENST00000615335 CYB5R3P00387 301 aaPredicted RBP11.23□□□□□ -0.61
FOXN3-219ENST00000615335 COL10A1Q03692 680 aa11.23□□□□□ -0.61
FOXN3-219ENST00000615335 KLRB1Q12918 225 aa11.23□□□□□ -0.61
FOXN3-219ENST00000615335 PMS2P11Q13670 270 aa11.23□□□□□ -0.61
FOXN3-219ENST00000615335 GLIPR1L1Q6UWM5 242 aa11.23□□□□□ -0.61
FOXN3-219ENST00000615335 OR10G4Q8NGN3 311 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms