RNA–Protein interactions for RNA: ENST00000610543.4

CNTFR-204, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNTFR, Length 1,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-204ENST00000610543 PRR18Q8N4B5 295 aa12.9□□□□□ -0.34
CNTFR-204ENST00000610543 MBD3L2Q8NHZ7 208 aaPredicted RBP12.9□□□□□ -0.34
CNTFR-204ENST00000610543 TAAR6Q96RI8 345 aa12.9□□□□□ -0.34
CNTFR-204ENST00000610543 HES4Q9HCC6 221 aa12.9□□□□□ -0.34
CNTFR-204ENST00000610543 KCNIP1Q9NZI2 227 aa12.9□□□□□ -0.34
CNTFR-204ENST00000610543 LUZP4Q9P127 313 aa12.9□□□□□ -0.34
CNTFR-204ENST00000610543 OR1A1Q9P1Q5 309 aa12.9□□□□□ -0.34
CNTFR-204ENST00000610543 WIPI2Q9Y4P8 454 aa12.9□□□□□ -0.34
CNTFR-204ENST00000610543 MLNRO43193 412 aa12.9□□□□□ -0.35
CNTFR-204ENST00000610543 SSSCA1O60232 199 aa12.9□□□□□ -0.35
CNTFR-204ENST00000610543 TNFSF13O75888 250 aa12.9□□□□□ -0.35
CNTFR-204ENST00000610543 IGLV1-44P01699 117 aa12.9□□□□□ -0.35
CNTFR-204ENST00000610543 SPP1P10451 314 aa12.9□□□□□ -0.35
CNTFR-204ENST00000610543 SLC25A6P12236 298 aa12.9□□□□□ -0.35
CNTFR-204ENST00000610543 POLR2GP62487 172 aaKnown RBP eCLIP12.9□□□□□ -0.35
CNTFR-204ENST00000610543 MZT1Q08AG7 82 aa12.9□□□□□ -0.35
CNTFR-204ENST00000610543 ZNF273Q14593 569 aa12.9□□□□□ -0.35
CNTFR-204ENST00000610543 HMGN3Q15651 99 aa12.9□□□□□ -0.35
CNTFR-204ENST00000610543 CLEC9AQ6UXN8 241 aa12.9□□□□□ -0.35
CNTFR-204ENST00000610543 BHLHA15Q7RTS1 189 aaPredicted RBP12.9□□□□□ -0.35
CNTFR-204ENST00000610543 PLEKHF2Q9H8W4 249 aa12.9□□□□□ -0.35
CNTFR-204ENST00000610543 LYRM2Q9NU23 88 aaPredicted RBP12.9□□□□□ -0.35
CNTFR-204ENST00000610543 LIN7CQ9NUP9 197 aaKnown RBP12.9□□□□□ -0.35
CNTFR-204ENST00000610543 UQCC1Q9NVA1 299 aa12.9□□□□□ -0.35
CNTFR-204ENST00000610543 OR14J1Q9UGF5 321 aa12.9□□□□□ -0.35
CNTFR-204ENST00000610543 TMEM30CPA0ZSE6 113 aa12.89□□□□□ -0.35
CNTFR-204ENST00000610543 A6NLC8 198 aa12.89□□□□□ -0.35
CNTFR-204ENST00000610543 C3orf80F5H4A9 247 aa12.89□□□□□ -0.35
CNTFR-204ENST00000610543 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.89□□□□□ -0.35
CNTFR-204ENST00000610543 PITX3O75364 302 aa12.89□□□□□ -0.35
CNTFR-204ENST00000610543 NHLH2Q02577 135 aa12.89□□□□□ -0.35
CNTFR-204ENST00000610543 ATRAIDQ6UW56 229 aa12.89□□□□□ -0.35
CNTFR-204ENST00000610543 BTNL8Q6UX41 500 aa12.89□□□□□ -0.35
CNTFR-204ENST00000610543 FAM169BQ8N8A8 192 aa12.89□□□□□ -0.35
CNTFR-204ENST00000610543 ZNF610Q8N9Z0 462 aa12.89□□□□□ -0.35
CNTFR-204ENST00000610543 OR51H1Q8NH63 302 aa12.89□□□□□ -0.35
CNTFR-204ENST00000610543 RNASE11Q8TAA1 199 aaKnown RBP12.89□□□□□ -0.35
CNTFR-204ENST00000610543 STARD4Q96DR4 205 aa12.89□□□□□ -0.35
CNTFR-204ENST00000610543 GPHA2Q96T91 129 aa12.89□□□□□ -0.35
CNTFR-204ENST00000610543 SEC11CQ9BY50 192 aa12.89□□□□□ -0.35
CNTFR-204ENST00000610543 C11orf1Q9H5F2 150 aa12.89□□□□□ -0.35
CNTFR-204ENST00000610543 ZNF71Q9NQZ8 489 aaPredicted RBP12.89□□□□□ -0.35
CNTFR-204ENST00000610543 DKK4Q9UBT3 224 aa12.89□□□□□ -0.35
CNTFR-204ENST00000610543 KCNS2Q9ULS6 477 aa12.89□□□□□ -0.35
CNTFR-204ENST00000610543 CARHSP1Q9Y2V2 147 aaKnown RBP12.89□□□□□ -0.35
CNTFR-204ENST00000610543 CACNA1GO43497 2377 aa12.89□□□□□ -0.35
CNTFR-204ENST00000610543 OR5H1A6NKK0 313 aa12.88□□□□□ -0.35
CNTFR-204ENST00000610543 ID3Q02535 119 aa12.88□□□□□ -0.35
CNTFR-204ENST00000610543 BAXQ07812 192 aa12.88□□□□□ -0.35
CNTFR-204ENST00000610543 C10orf91Q5T1B1 145 aa12.88□□□□□ -0.35
CNTFR-204ENST00000610543 MBNL2Q5VZF2 373 aaKnown RBP12.88□□□□□ -0.35
CNTFR-204ENST00000610543 COMMD1Q8N668 190 aa12.88□□□□□ -0.35
CNTFR-204ENST00000610543 BSCL2Q96G97 398 aaPredicted RBP12.88□□□□□ -0.35
CNTFR-204ENST00000610543 TLNRD1Q9H1K6 362 aa12.88□□□□□ -0.35
CNTFR-204ENST00000610543 OPN3Q9H1Y3 402 aaPredicted RBP12.88□□□□□ -0.35
CNTFR-204ENST00000610543 STRAPQ9Y3F4 350 aaKnown RBP12.88□□□□□ -0.35
CNTFR-204ENST00000610543 IGHV2OR16-5A0A0B4J2B6 119 aa12.88□□□□□ -0.35
CNTFR-204ENST00000610543 IGHV3-64DA0A0J9YX35 117 aa12.88□□□□□ -0.35
CNTFR-204ENST00000610543 A0A1B0GU03 582 aa12.88□□□□□ -0.35
CNTFR-204ENST00000610543 LOC105371267A0A1B0GV96 52 aa12.88□□□□□ -0.35
CNTFR-204ENST00000610543 RNF212BA8MTL3 300 aa12.88□□□□□ -0.35
CNTFR-204ENST00000610543 SIGLEC5O15389 551 aa12.88□□□□□ -0.35
CNTFR-204ENST00000610543 CGAP01215 116 aa12.88□□□□□ -0.35
CNTFR-204ENST00000610543 DANCRP0C864 163 aa12.88□□□□□ -0.35
CNTFR-204ENST00000610543 TESK1Q15569 626 aa12.88□□□□□ -0.35
CNTFR-204ENST00000610543 WFDC1Q9HC57 220 aa12.88□□□□□ -0.35
CNTFR-204ENST00000610543 IGHV1-18A0A0C4DH31 117 aa12.87□□□□□ -0.35
CNTFR-204ENST00000610543 FAM24AA6NFZ4 105 aa12.87□□□□□ -0.35
CNTFR-204ENST00000610543 SNAPINO95295 136 aa12.87□□□□□ -0.35
CNTFR-204ENST00000610543 TSPAN15O95858 294 aa12.87□□□□□ -0.35
CNTFR-204ENST00000610543 PSG2P11465 335 aa12.87□□□□□ -0.35
CNTFR-204ENST00000610543 ADCYAP1P18509 176 aa12.87□□□□□ -0.35
CNTFR-204ENST00000610543 ATF4P18848 351 aaPredicted RBP12.87□□□□□ -0.35
CNTFR-204ENST00000610543 LMO1P25800 156 aa12.87□□□□□ -0.35
CNTFR-204ENST00000610543 CD200P41217 278 aa12.87□□□□□ -0.35
CNTFR-204ENST00000610543 CAMLGP49069 296 aa12.87□□□□□ -0.35
CNTFR-204ENST00000610543 SMIM21Q3B7S5 101 aa12.87□□□□□ -0.35
CNTFR-204ENST00000610543 CXorf66Q5JRM2 361 aaPredicted RBP12.87□□□□□ -0.35
CNTFR-204ENST00000610543 LYPD6BQ8NI32 183 aa12.87□□□□□ -0.35
CNTFR-204ENST00000610543 TMEM231Q9H6L2 316 aa12.87□□□□□ -0.35
CNTFR-204ENST00000610543 CELSR3Q9NYQ7 3312 aa12.87□□□□□ -0.35
CNTFR-204ENST00000610543 TRAV39A0A0B4J263 110 aa12.86□□□□□ -0.35
CNTFR-204ENST00000610543 IGSF23A1L1A6 192 aa12.86□□□□□ -0.35
CNTFR-204ENST00000610543 OOEPA6NGQ2 149 aa12.86□□□□□ -0.35
CNTFR-204ENST00000610543 PRH1P02810 166 aa12.86□□□□□ -0.35
CNTFR-204ENST00000610543 MUC1P15941 1255 aaPredicted RBP12.86□□□□□ -0.35
CNTFR-204ENST00000610543 ARHGDIBP52566 201 aa12.86□□□□□ -0.35
CNTFR-204ENST00000610543 SRSF3P84103 164 aaKnown RBP12.86□□□□□ -0.35
CNTFR-204ENST00000610543 ZNF616Q08AN1 781 aa12.86□□□□□ -0.35
CNTFR-204ENST00000610543 SLC35E4Q6ICL7 350 aa12.86□□□□□ -0.35
CNTFR-204ENST00000610543 ACP7Q6ZNF0 438 aa12.86□□□□□ -0.35
CNTFR-204ENST00000610543 Q6ZS92 163 aa12.86□□□□□ -0.35
CNTFR-204ENST00000610543 HSD17B11Q8NBQ5 300 aa12.86□□□□□ -0.35
CNTFR-204ENST00000610543 PRR7Q8TB68 274 aa12.86□□□□□ -0.35
CNTFR-204ENST00000610543 LSM10Q969L4 123 aaKnown RBP12.86□□□□□ -0.35
CNTFR-204ENST00000610543 GALMQ96C23 342 aa12.86□□□□□ -0.35
CNTFR-204ENST00000610543 MAGT1Q9H0U3 335 aa12.86□□□□□ -0.35
CNTFR-204ENST00000610543 CRYABP02511 175 aaKnown RBP12.86□□□□□ -0.35
CNTFR-204ENST00000610543 HEXAP06865 529 aa12.86□□□□□ -0.35
CNTFR-204ENST00000610543 CEACAM6P40199 344 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms