RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 FAM46BQ96A09 425 aa13.01□□□□□ -0.33
TUBE1-206ENST00000603722 CYYR1Q96J86 154 aa13.01□□□□□ -0.33
TUBE1-206ENST00000603722 UQCC2Q9BRT2 126 aa13.01□□□□□ -0.33
TUBE1-206ENST00000603722 TMED9Q9BVK6 235 aa13.01□□□□□ -0.33
TUBE1-206ENST00000603722 DCLRE1BQ9H816 532 aa13.01□□□□□ -0.33
TUBE1-206ENST00000603722 IGHV3-72A0A0B4J1Y9 119 aa13□□□□□ -0.33
TUBE1-206ENST00000603722 PTGES3LE9PB15 166 aa13□□□□□ -0.33
TUBE1-206ENST00000603722 AQP4P55087 323 aa13□□□□□ -0.33
TUBE1-206ENST00000603722 LOXL3P58215 753 aa13□□□□□ -0.33
TUBE1-206ENST00000603722 ZNF816Q0VGE8 651 aaPredicted RBP13□□□□□ -0.33
TUBE1-206ENST00000603722 GPR50Q13585 617 aa13□□□□□ -0.33
TUBE1-206ENST00000603722 ACSM3Q53FZ2 586 aa13□□□□□ -0.33
TUBE1-206ENST00000603722 C6orf141Q5SZD1 244 aa13□□□□□ -0.33
TUBE1-206ENST00000603722 C6orf183Q5T699 404 aa13□□□□□ -0.33
TUBE1-206ENST00000603722 FAM27D1Q5T7N8 215 aa13□□□□□ -0.33
TUBE1-206ENST00000603722 MOB3BQ86TA1 216 aa13□□□□□ -0.33
TUBE1-206ENST00000603722 OR10V1Q8NGI7 309 aa13□□□□□ -0.33
TUBE1-206ENST00000603722 SGCDQ92629 289 aa13□□□□□ -0.33
TUBE1-206ENST00000603722 Q96M66 194 aa13□□□□□ -0.33
TUBE1-206ENST00000603722 TSSC4Q9Y5U2 329 aaPredicted RBP13□□□□□ -0.33
TUBE1-206ENST00000603722 IGHV1-3A0A0C4DH29 117 aa12.99□□□□□ -0.33
TUBE1-206ENST00000603722 FAM90A10PA6NDY2 464 aa12.99□□□□□ -0.33
TUBE1-206ENST00000603722 FAM90A7PA6NKC0 464 aa12.99□□□□□ -0.33
TUBE1-206ENST00000603722 FAM90A23PA8MXZ1 464 aa12.99□□□□□ -0.33
TUBE1-206ENST00000603722 SLC31A2O15432 143 aa12.99□□□□□ -0.33
TUBE1-206ENST00000603722 SPINT2O43291 252 aa12.99□□□□□ -0.33
TUBE1-206ENST00000603722 GAPDHP04406 335 aaKnown RBP12.99□□□□□ -0.33
TUBE1-206ENST00000603722 RNLSQ5VYX0 342 aa12.99□□□□□ -0.33
TUBE1-206ENST00000603722 LINC00311Q8N616 119 aa12.99□□□□□ -0.33
TUBE1-206ENST00000603722 C8orf31Q8N9H6 132 aa12.99□□□□□ -0.33
TUBE1-206ENST00000603722 GNG12Q9UBI6 72 aa12.99□□□□□ -0.33
TUBE1-206ENST00000603722 LSM2Q9Y333 95 aaKnown RBP12.99□□□□□ -0.33
TUBE1-206ENST00000603722 UBE2QL1A1L167 161 aa12.98□□□□□ -0.33
TUBE1-206ENST00000603722 PSMB11A5LHX3 300 aa12.98□□□□□ -0.33
TUBE1-206ENST00000603722 FGF16O43320 207 aa12.98□□□□□ -0.33
TUBE1-206ENST00000603722 SC5DO75845 299 aa12.98□□□□□ -0.33
TUBE1-206ENST00000603722 HBZP02008 142 aa12.98□□□□□ -0.33
TUBE1-206ENST00000603722 PF4P02776 101 aa12.98□□□□□ -0.33
TUBE1-206ENST00000603722 RCC1P18754 421 aaPredicted RBP12.98□□□□□ -0.33
TUBE1-206ENST00000603722 FUT3P21217 361 aa12.98□□□□□ -0.33
TUBE1-206ENST00000603722 IL3RAP26951 378 aa12.98□□□□□ -0.33
TUBE1-206ENST00000603722 GP2P55259 537 aaKnown RBP12.98□□□□□ -0.33
TUBE1-206ENST00000603722 SPHARQ15513 63 aa12.98□□□□□ -0.33
TUBE1-206ENST00000603722 MED22Q15528 200 aa12.98□□□□□ -0.33
TUBE1-206ENST00000603722 NKAPLQ5M9Q1 402 aa12.98□□□□□ -0.33
TUBE1-206ENST00000603722 RBM48Q5RL73 367 aaKnown RBP12.98□□□□□ -0.33
TUBE1-206ENST00000603722 SIGIRRQ6IA17 410 aa12.98□□□□□ -0.33
TUBE1-206ENST00000603722 ZNF329Q86UD4 541 aa12.98□□□□□ -0.33
TUBE1-206ENST00000603722 GAPTQ8N292 157 aa12.98□□□□□ -0.33
TUBE1-206ENST00000603722 MS4A15Q8N5U1 240 aa12.98□□□□□ -0.33
TUBE1-206ENST00000603722 OR1L1Q8NH94 360 aa12.98□□□□□ -0.33
TUBE1-206ENST00000603722 NRG4Q8WWG1 115 aa12.98□□□□□ -0.33
TUBE1-206ENST00000603722 NOL4LQ96MY1 436 aaPredicted RBP12.98□□□□□ -0.33
TUBE1-206ENST00000603722 CST11Q9H112 138 aa12.98□□□□□ -0.33
TUBE1-206ENST00000603722 RAB9BQ9NP90 201 aa12.98□□□□□ -0.33
TUBE1-206ENST00000603722 SCN3BQ9NY72 215 aa12.98□□□□□ -0.33
TUBE1-206ENST00000603722 GHRLQ9UBU3 117 aa12.98□□□□□ -0.33
TUBE1-206ENST00000603722 SERPINE3A8MV23 424 aa12.97□□□□□ -0.33
TUBE1-206ENST00000603722 PDCD6O75340 191 aa12.97□□□□□ -0.33
TUBE1-206ENST00000603722 CA11O75493 328 aa12.97□□□□□ -0.33
TUBE1-206ENST00000603722 MPIG6BO95866 241 aa12.97□□□□□ -0.33
TUBE1-206ENST00000603722 CD33P20138 364 aa12.97□□□□□ -0.33
TUBE1-206ENST00000603722 TMEM30BQ3MIR4 351 aa12.97□□□□□ -0.33
TUBE1-206ENST00000603722 Q3ZCU0 254 aa12.97□□□□□ -0.33
TUBE1-206ENST00000603722 OR10K2Q6IF99 312 aa12.97□□□□□ -0.33
TUBE1-206ENST00000603722 TRAT1Q6PIZ9 186 aa12.97□□□□□ -0.33
TUBE1-206ENST00000603722 UNQ9370/PRO34162Q6UXP9 181 aa12.97□□□□□ -0.33
TUBE1-206ENST00000603722 SLC25A48Q6ZT89 311 aaKnown RBP12.97□□□□□ -0.33
TUBE1-206ENST00000603722 LRRTM1Q86UE6 522 aa12.97□□□□□ -0.33
TUBE1-206ENST00000603722 IZUMO1Q8IYV9 350 aa12.97□□□□□ -0.33
TUBE1-206ENST00000603722 ZNF439Q8NDP4 499 aa12.97□□□□□ -0.33
TUBE1-206ENST00000603722 RTN4IP1Q8WWV3 396 aaPredicted RBP12.97□□□□□ -0.33
TUBE1-206ENST00000603722 ST6GALNAC6Q969X2 333 aa12.97□□□□□ -0.33
TUBE1-206ENST00000603722 EAF1Q96JC9 268 aaPredicted RBP12.97□□□□□ -0.33
TUBE1-206ENST00000603722 TAF9BQ9HBM6 251 aa12.97□□□□□ -0.33
TUBE1-206ENST00000603722 LINC00527Q9UJ94 153 aa12.97□□□□□ -0.33
TUBE1-206ENST00000603722 NCBP2LA6PVI3 153 aaKnown RBP12.96□□□□□ -0.33
TUBE1-206ENST00000603722 H0YHG0 523 aa12.96□□□□□ -0.33
TUBE1-206ENST00000603722 GLAP06280 429 aa12.96□□□□□ -0.33
TUBE1-206ENST00000603722 UBBP0CG47 229 aa12.96□□□□□ -0.33
TUBE1-206ENST00000603722 SLC35A2P78381 396 aa12.96□□□□□ -0.33
TUBE1-206ENST00000603722 EBI3Q14213 229 aa12.96□□□□□ -0.33
TUBE1-206ENST00000603722 HSD17B12Q53GQ0 312 aa12.96□□□□□ -0.33
TUBE1-206ENST00000603722 GLT8D1Q68CQ7 371 aa12.96□□□□□ -0.33
TUBE1-206ENST00000603722 CEACAM19Q7Z692 300 aa12.96□□□□□ -0.33
TUBE1-206ENST00000603722 SLC35E3Q7Z769 313 aa12.96□□□□□ -0.33
TUBE1-206ENST00000603722 TGIF2LXQ8IUE1 241 aa12.96□□□□□ -0.33
TUBE1-206ENST00000603722 MRPL30Q8TCC3 161 aaKnown RBP12.96□□□□□ -0.33
TUBE1-206ENST00000603722 PHYHIPQ92561 330 aa12.96□□□□□ -0.33
TUBE1-206ENST00000603722 UFD1Q92890 307 aa12.96□□□□□ -0.33
TUBE1-206ENST00000603722 PHF21AQ96BD5 680 aa12.96□□□□□ -0.33
TUBE1-206ENST00000603722 KCNK15Q9H427 330 aa12.96□□□□□ -0.33
TUBE1-206ENST00000603722 ZNF736B4DX44 427 aaPredicted RBP12.95□□□□□ -0.34
TUBE1-206ENST00000603722 VSIG8P0DPA2 414 aa12.95□□□□□ -0.34
TUBE1-206ENST00000603722 IGLL1P15814 213 aa12.95□□□□□ -0.34
TUBE1-206ENST00000603722 ZNF134P52741 427 aa12.95□□□□□ -0.34
TUBE1-206ENST00000603722 IRF3Q14653 427 aa12.95□□□□□ -0.34
TUBE1-206ENST00000603722 GNMTQ14749 295 aa12.95□□□□□ -0.34
TUBE1-206ENST00000603722 CT45A1Q5HYN5 189 aa12.95□□□□□ -0.34
TUBE1-206ENST00000603722 LIPKQ5VXJ0 399 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms