RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 C5orf24Q7Z6I8 188 aa15.39■□□□□ 0.05
CCDC9-205ENST00000600117 RFESDQ8TAC1 157 aa15.39■□□□□ 0.05
CCDC9-205ENST00000600117 NUDCD2Q8WVJ2 157 aa15.39■□□□□ 0.05
CCDC9-205ENST00000600117 C6orf62Q9GZU0 229 aaPredicted RBP15.39■□□□□ 0.05
CCDC9-205ENST00000600117 Q9N2K0 584 aa15.39■□□□□ 0.05
CCDC9-205ENST00000600117 A3GALT2U3KPV4 340 aa15.39■□□□□ 0.05
CCDC9-205ENST00000600117 hCG_1809904A0A1W2PP81 198 aa15.38■□□□□ 0.05
CCDC9-205ENST00000600117 A0A1W2PPE2 198 aa15.38■□□□□ 0.05
CCDC9-205ENST00000600117 A0A1W2PR64 198 aa15.38■□□□□ 0.05
CCDC9-205ENST00000600117 A0A1W2PRV1 198 aa15.38■□□□□ 0.05
CCDC9-205ENST00000600117 RNASEK-C17orf49H0YIS7 233 aa15.38■□□□□ 0.05
CCDC9-205ENST00000600117 HLA-DQB1P01920 261 aa15.38■□□□□ 0.05
CCDC9-205ENST00000600117 FCGR3AP08637 254 aa15.38■□□□□ 0.05
CCDC9-205ENST00000600117 PTHLHP12272 177 aa15.38■□□□□ 0.05
CCDC9-205ENST00000600117 OMGP23515 440 aa15.38■□□□□ 0.05
CCDC9-205ENST00000600117 KLRD1Q13241 179 aa15.38■□□□□ 0.05
CCDC9-205ENST00000600117 HMGN3Q15651 99 aa15.38■□□□□ 0.05
CCDC9-205ENST00000600117 TRAT1Q6PIZ9 186 aa15.38■□□□□ 0.05
CCDC9-205ENST00000600117 BAIAP2L2Q6UXY1 529 aa15.38■□□□□ 0.05
CCDC9-205ENST00000600117 ZNF782Q6ZMW2 699 aaPredicted RBP15.38■□□□□ 0.05
CCDC9-205ENST00000600117 MOB1BQ7L9L4 216 aa15.38■□□□□ 0.05
CCDC9-205ENST00000600117 ZNF554Q86TJ5 538 aa15.38■□□□□ 0.05
CCDC9-205ENST00000600117 UBALD1Q8TB05 177 aa15.38■□□□□ 0.05
CCDC9-205ENST00000600117 ARL11Q969Q4 196 aa15.38■□□□□ 0.05
CCDC9-205ENST00000600117 KIRREL1Q96J84 757 aa15.38■□□□□ 0.05
CCDC9-205ENST00000600117 MMP27Q9H306 513 aa15.38■□□□□ 0.05
CCDC9-205ENST00000600117 TAF9BQ9HBM6 251 aa15.38■□□□□ 0.05
CCDC9-205ENST00000600117 IDI2-AS1Q9NZ38 188 aa15.38■□□□□ 0.05
CCDC9-205ENST00000600117 SESN1Q9Y6P5 492 aa15.38■□□□□ 0.05
CCDC9-205ENST00000600117 TRAV40A0A0B4J280 105 aa15.37■□□□□ 0.05
CCDC9-205ENST00000600117 CENPVL3A0A0U1RRI6 287 aa15.37■□□□□ 0.05
CCDC9-205ENST00000600117 HBZP02008 142 aa15.37■□□□□ 0.05
CCDC9-205ENST00000600117 IGHV4-38-2P0DP08 117 aa15.37■□□□□ 0.05
CCDC9-205ENST00000600117 MNDAP41218 407 aa15.37■□□□□ 0.05
CCDC9-205ENST00000600117 UTF1Q5T230 341 aa15.37■□□□□ 0.05
CCDC9-205ENST00000600117 CNIH2Q6PI25 160 aa15.37■□□□□ 0.05
CCDC9-205ENST00000600117 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.37■□□□□ 0.05
CCDC9-205ENST00000600117 OR1L1Q8NH94 360 aa15.37■□□□□ 0.05
CCDC9-205ENST00000600117 LHX4Q969G2 390 aa15.37■□□□□ 0.05
CCDC9-205ENST00000600117 EXTL2Q9UBQ6 330 aa15.37■□□□□ 0.05
CCDC9-205ENST00000600117 IGHV3OR16-10A0A075B7F0 116 aa15.36■□□□□ 0.05
CCDC9-205ENST00000600117 F2RL2O00254 374 aa15.36■□□□□ 0.05
CCDC9-205ENST00000600117 DTYMKP23919 212 aa15.36■□□□□ 0.05
CCDC9-205ENST00000600117 GNG2P59768 71 aa15.36■□□□□ 0.05
CCDC9-205ENST00000600117 MRPS15P82914 257 aaKnown RBP15.36■□□□□ 0.05
CCDC9-205ENST00000600117 PITPNAQ00169 270 aa15.36■□□□□ 0.05
CCDC9-205ENST00000600117 MADCAM1Q13477 382 aa15.36■□□□□ 0.05
CCDC9-205ENST00000600117 NCR3LG1Q68D85 454 aa15.36■□□□□ 0.05
CCDC9-205ENST00000600117 TEX29Q8N6K0 151 aa15.36■□□□□ 0.05
CCDC9-205ENST00000600117 OR10A7Q8NGE5 316 aa15.36■□□□□ 0.05
CCDC9-205ENST00000600117 SGMS2Q8NHU3 365 aa15.36■□□□□ 0.05
CCDC9-205ENST00000600117 NANPQ8TBE9 248 aa15.36■□□□□ 0.05
CCDC9-205ENST00000600117 SETD6Q8TBK2 473 aa15.36■□□□□ 0.05
CCDC9-205ENST00000600117 TMEM133Q9H2Q1 129 aa15.36■□□□□ 0.05
CCDC9-205ENST00000600117 KCNIP1Q9NZI2 227 aa15.36■□□□□ 0.05
CCDC9-205ENST00000600117 ZNF230Q9UIE0 474 aaPredicted RBP15.36■□□□□ 0.05
CCDC9-205ENST00000600117 ADAM30Q9UKF2 790 aa15.36■□□□□ 0.05
CCDC9-205ENST00000600117 FPR2P25090 351 aa15.35■□□□□ 0.05
CCDC9-205ENST00000600117 TNFSF8P32971 234 aa15.35■□□□□ 0.05
CCDC9-205ENST00000600117 TALDO1P37837 337 aa15.35■□□□□ 0.05
CCDC9-205ENST00000600117 LOXL3P58215 753 aa15.35■□□□□ 0.05
CCDC9-205ENST00000600117 HLA-DRB3P79483 266 aa15.35■□□□□ 0.05
CCDC9-205ENST00000600117 GUCA2AQ02747 115 aa15.35■□□□□ 0.05
CCDC9-205ENST00000600117 SRSF7Q16629 238 aaKnown RBP eCLIP15.35■□□□□ 0.05
CCDC9-205ENST00000600117 CNPY1Q3B7I2 92 aa15.35■□□□□ 0.05
CCDC9-205ENST00000600117 PDZD9Q8IXQ8 264 aa15.35■□□□□ 0.05
CCDC9-205ENST00000600117 MAFIPQ8WZ33 124 aa15.35■□□□□ 0.05
CCDC9-205ENST00000600117 GCDHQ92947 438 aaPredicted RBP15.35■□□□□ 0.05
CCDC9-205ENST00000600117 SUCNR1Q9BXA5 334 aa15.35■□□□□ 0.05
CCDC9-205ENST00000600117 HEXA-AS1Q9H8Q6 139 aa15.35■□□□□ 0.05
CCDC9-205ENST00000600117 MGAT4AQ9UM21 535 aa15.35■□□□□ 0.05
CCDC9-205ENST00000600117 IGKV1D-8A0A087WSZ0 117 aa15.34■□□□□ 0.05
CCDC9-205ENST00000600117 A0A087X0M5 115 aa15.34■□□□□ 0.05
CCDC9-205ENST00000600117 IGHV1-69DA0A0B4J2H0 117 aa15.34■□□□□ 0.05
CCDC9-205ENST00000600117 A0A1B0GX30 115 aa15.34■□□□□ 0.05
CCDC9-205ENST00000600117 TRDCB7Z8K6 153 aa15.34■□□□□ 0.05
CCDC9-205ENST00000600117 SPINT2O43291 252 aa15.34■□□□□ 0.05
CCDC9-205ENST00000600117 TPPPO94811 219 aa15.34■□□□□ 0.05
CCDC9-205ENST00000600117 IGHV1-69P01742 117 aa15.34■□□□□ 0.05
CCDC9-205ENST00000600117 COX7A1P24310 79 aa15.34■□□□□ 0.05
CCDC9-205ENST00000600117 CD34P28906 385 aa15.34■□□□□ 0.05
CCDC9-205ENST00000600117 UBE2E1P51965 193 aa15.34■□□□□ 0.05
CCDC9-205ENST00000600117 LTC4SQ16873 150 aa15.34■□□□□ 0.05
CCDC9-205ENST00000600117 GPR157Q5UAW9 335 aa15.34■□□□□ 0.05
CCDC9-205ENST00000600117 RUSC1-AS1Q66K80 236 aa15.34■□□□□ 0.05
CCDC9-205ENST00000600117 OR52W1Q6IF63 320 aa15.34■□□□□ 0.05
CCDC9-205ENST00000600117 FAM53AQ6NSI3 398 aaPredicted RBP15.34■□□□□ 0.05
CCDC9-205ENST00000600117 Q6ZS49 121 aa15.34■□□□□ 0.05
CCDC9-205ENST00000600117 PNKDQ8N490 385 aa15.34■□□□□ 0.05
CCDC9-205ENST00000600117 OR52M1Q8NGK5 317 aa15.34■□□□□ 0.05
CCDC9-205ENST00000600117 ZNF286AQ9HBT8 521 aa15.34■□□□□ 0.05
CCDC9-205ENST00000600117 RAB9BQ9NP90 201 aa15.34■□□□□ 0.05
CCDC9-205ENST00000600117 GFOD1Q9NXC2 390 aa15.34■□□□□ 0.05
CCDC9-205ENST00000600117 NUP50Q9UKX7 468 aa15.34■□□□□ 0.05
CCDC9-205ENST00000600117 MRPS7Q9Y2R9 242 aaKnown RBP15.34■□□□□ 0.05
CCDC9-205ENST00000600117 IGHV2-26A0A0B4J1V2 119 aa15.33■□□□□ 0.04
CCDC9-205ENST00000600117 MEIOCA2RUB1 952 aa15.33■□□□□ 0.04
CCDC9-205ENST00000600117 FAM172BPA6NC97 362 aa15.33■□□□□ 0.04
CCDC9-205ENST00000600117 SCTP09683 121 aa15.33■□□□□ 0.04
CCDC9-205ENST00000600117 TMEM30BQ3MIR4 351 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms