RNA–Protein interactions for RNA: ENST00000599848.5

UPF1-207, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 1 (best) BASIC

Gene UPF1, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-207ENST00000599848 MPZL1O95297 269 aa17.82■□□□□ 0.44
UPF1-207ENST00000599848 ZNF154Q13106 437 aa17.82■□□□□ 0.44
UPF1-207ENST00000599848 KLF9Q13886 244 aaPredicted RBP17.82■□□□□ 0.44
UPF1-207ENST00000599848 USF1P22415 310 aaPredicted RBP17.82■□□□□ 0.44
UPF1-207ENST00000599848 PSG5Q15238 335 aa17.82■□□□□ 0.44
UPF1-207ENST00000599848 IDI2-AS1Q9NZ38 188 aa17.82■□□□□ 0.44
UPF1-207ENST00000599848 HILPDAQ9Y5L2 63 aa17.82■□□□□ 0.44
UPF1-207ENST00000599848 HS3ST3B1Q9Y662 390 aa17.82■□□□□ 0.44
UPF1-207ENST00000599848 ZNF205O95201 554 aa17.81■□□□□ 0.44
UPF1-207ENST00000599848 DHRS2Q13268 280 aa17.81■□□□□ 0.44
UPF1-207ENST00000599848 PET117Q6UWS5 81 aa17.81■□□□□ 0.44
UPF1-207ENST00000599848 TMEM186Q96B77 213 aa17.81■□□□□ 0.44
UPF1-207ENST00000599848 U3KQ87 197 aa17.81■□□□□ 0.44
UPF1-207ENST00000599848 IGHV3-13P01766 116 aa17.81■□□□□ 0.44
UPF1-207ENST00000599848 IGHV3-7P01780 117 aa17.81■□□□□ 0.44
UPF1-207ENST00000599848 SNRPD3P62318 126 aaKnown RBP17.81■□□□□ 0.44
UPF1-207ENST00000599848 OR52B4Q8NGK2 314 aa17.81■□□□□ 0.44
UPF1-207ENST00000599848 OR4C13Q8NGP0 309 aa17.81■□□□□ 0.44
UPF1-207ENST00000599848 ADIPOR1Q96A54 375 aa17.81■□□□□ 0.44
UPF1-207ENST00000599848 EEF1AKMT3Q96AZ1 226 aa17.81■□□□□ 0.44
UPF1-207ENST00000599848 TMEM45BQ96B21 275 aa17.81■□□□□ 0.44
UPF1-207ENST00000599848 hCG_38984A0A1B0GV85 526 aa17.81■□□□□ 0.44
UPF1-207ENST00000599848 ACAA2P42765 397 aaKnown RBP17.81■□□□□ 0.44
UPF1-207ENST00000599848 PTX4Q96A99 478 aa17.81■□□□□ 0.44
UPF1-207ENST00000599848 PHYHIPLQ96FC7 376 aa17.81■□□□□ 0.44
UPF1-207ENST00000599848 MRPS18BQ9Y676 258 aaKnown RBP17.81■□□□□ 0.44
UPF1-207ENST00000599848 MYO7AQ13402 2215 aa17.81■□□□□ 0.44
UPF1-207ENST00000599848 STAG3L2P0CL84 134 aa17.81■□□□□ 0.44
UPF1-207ENST00000599848 CLEC7AQ9BXN2 247 aa17.81■□□□□ 0.44
UPF1-207ENST00000599848 TNRC6CQ9HCJ0 1690 aaKnown RBP17.81■□□□□ 0.44
UPF1-207ENST00000599848 SMAD7O15105 426 aaKnown RBP17.8■□□□□ 0.44
UPF1-207ENST00000599848 MELTFP08582 738 aa17.8■□□□□ 0.44
UPF1-207ENST00000599848 PPP1R1AQ13522 171 aa17.8■□□□□ 0.44
UPF1-207ENST00000599848 FAM74A3Q4VXF1 159 aa17.8■□□□□ 0.44
UPF1-207ENST00000599848 DUX5Q96PT3 197 aa17.8■□□□□ 0.44
UPF1-207ENST00000599848 ARID1BQ8NFD5 2236 aaPredicted RBP17.8■□□□□ 0.44
UPF1-207ENST00000599848 CXorf1O96002 111 aa17.8■□□□□ 0.44
UPF1-207ENST00000599848 FAM209BQ5JX69 171 aa17.8■□□□□ 0.44
UPF1-207ENST00000599848 SAMD13Q5VXD3 122 aa17.8■□□□□ 0.44
UPF1-207ENST00000599848 DMKNQ6E0U4 476 aaPredicted RBP17.8■□□□□ 0.44
UPF1-207ENST00000599848 ANAPC16Q96DE5 110 aa17.8■□□□□ 0.44
UPF1-207ENST00000599848 WDFY2Q96P53 400 aa17.8■□□□□ 0.44
UPF1-207ENST00000599848 PDE6DO43924 150 aa17.8■□□□□ 0.44
UPF1-207ENST00000599848 TIMM23BQ5SRD1 257 aa17.8■□□□□ 0.44
UPF1-207ENST00000599848 ABHD1Q96SE0 405 aa17.8■□□□□ 0.44
UPF1-207ENST00000599848 RNF167Q9H6Y7 350 aa17.8■□□□□ 0.44
UPF1-207ENST00000599848 RALYQ9UKM9 306 aaKnown RBP17.8■□□□□ 0.44
UPF1-207ENST00000599848 A0A0G2JLM5 398 aa17.8■□□□□ 0.44
UPF1-207ENST00000599848 HELTA6NFD8 242 aa17.8■□□□□ 0.44
UPF1-207ENST00000599848 ZNF729A6NN14 1252 aaPredicted RBP17.8■□□□□ 0.44
UPF1-207ENST00000599848 MFNGO00587 321 aa17.8■□□□□ 0.44
UPF1-207ENST00000599848 RBM11P57052 281 aaKnown RBP17.8■□□□□ 0.44
UPF1-207ENST00000599848 AESQ08117 197 aa17.8■□□□□ 0.44
UPF1-207ENST00000599848 MOGAT2Q3SYC2 334 aa17.8■□□□□ 0.44
UPF1-207ENST00000599848 GAPTQ8N292 157 aa17.8■□□□□ 0.44
UPF1-207ENST00000599848 MYOZ3Q8TDC0 251 aa17.8■□□□□ 0.44
UPF1-207ENST00000599848 MMP26Q9NRE1 261 aa17.8■□□□□ 0.44
UPF1-207ENST00000599848 YAE1D1Q9NRH1 226 aa17.8■□□□□ 0.44
UPF1-207ENST00000599848 CTDSPLO15194 276 aa17.79■□□□□ 0.44
UPF1-207ENST00000599848 FAM27D1Q5T7N8 215 aa17.79■□□□□ 0.44
UPF1-207ENST00000599848 A0A1B0GTL3 188 aa17.79■□□□□ 0.44
UPF1-207ENST00000599848 SULT1A1P50225 295 aa17.79■□□□□ 0.44
UPF1-207ENST00000599848 OR2T10Q8NGZ9 312 aa17.79■□□□□ 0.44
UPF1-207ENST00000599848 KIAA1324LA8MWY0 1029 aaPredicted RBP17.79■□□□□ 0.44
UPF1-207ENST00000599848 MPDU1O75352 247 aa17.79■□□□□ 0.44
UPF1-207ENST00000599848 ATP5IP56385 69 aaPredicted RBP17.79■□□□□ 0.44
UPF1-207ENST00000599848 DSCR9P59020 149 aa17.79■□□□□ 0.44
UPF1-207ENST00000599848 B2MP61769 119 aa17.79■□□□□ 0.44
UPF1-207ENST00000599848 ZNF343Q6P1L6 599 aa17.79■□□□□ 0.44
UPF1-207ENST00000599848 Q6ZNX1 250 aa17.79■□□□□ 0.44
UPF1-207ENST00000599848 FAM168AQ92567 244 aa17.79■□□□□ 0.44
UPF1-207ENST00000599848 ZG16BQ96DA0 208 aa17.79■□□□□ 0.44
UPF1-207ENST00000599848 PGLYRP3Q96LB9 341 aa17.79■□□□□ 0.44
UPF1-207ENST00000599848 MEX3AA1L020 520 aaKnown RBP17.79■□□□□ 0.44
UPF1-207ENST00000599848 FGF12P61328 243 aa17.79■□□□□ 0.44
UPF1-207ENST00000599848 ABCA3Q99758 1704 aa17.79■□□□□ 0.44
UPF1-207ENST00000599848 DCAF16Q9NXF7 216 aa17.79■□□□□ 0.44
UPF1-207ENST00000599848 FCN1O00602 326 aa17.79■□□□□ 0.44
UPF1-207ENST00000599848 TNFSF10P50591 281 aa17.79■□□□□ 0.44
UPF1-207ENST00000599848 ZNF738Q8NE65 137 aa17.79■□□□□ 0.44
UPF1-207ENST00000599848 ZNF385AQ96PM9 386 aaKnown RBP17.79■□□□□ 0.44
UPF1-207ENST00000599848 TMPRSS13Q9BYE2 586 aa17.79■□□□□ 0.44
UPF1-207ENST00000599848 TSPAN2O60636 221 aa17.78■□□□□ 0.44
UPF1-207ENST00000599848 PSG9Q00887 426 aa17.78■□□□□ 0.44
UPF1-207ENST00000599848 IL22RA2Q969J5 263 aa17.78■□□□□ 0.44
UPF1-207ENST00000599848 UPK3AO75631 287 aa17.78■□□□□ 0.44
UPF1-207ENST00000599848 DXOO77932 396 aaKnown RBP17.78■□□□□ 0.44
UPF1-207ENST00000599848 NAT8Q9UHE5 227 aa17.78■□□□□ 0.44
UPF1-207ENST00000599848 LNP1A1A4G5 178 aa17.78■□□□□ 0.44
UPF1-207ENST00000599848 COX6A1P12074 109 aa17.78■□□□□ 0.44
UPF1-207ENST00000599848 GBGT1Q8N5D6 347 aa17.78■□□□□ 0.44
UPF1-207ENST00000599848 FAM210BQ96KR6 192 aa17.78■□□□□ 0.44
UPF1-207ENST00000599848 TMEM191AQ9H0A3 160 aa17.78■□□□□ 0.44
UPF1-207ENST00000599848 RPS20P60866 119 aaKnown RBP17.78■□□□□ 0.44
UPF1-207ENST00000599848 C1QL3Q5VWW1 255 aa17.78■□□□□ 0.44
UPF1-207ENST00000599848 DHRS11Q6UWP2 260 aa17.78■□□□□ 0.44
UPF1-207ENST00000599848 SLC22A18ASQ8N1D0 253 aa17.78■□□□□ 0.44
UPF1-207ENST00000599848 TMEFF2Q9UIK5 374 aaPredicted RBP17.78■□□□□ 0.44
UPF1-207ENST00000599848 FFAR1O14842 300 aa17.77■□□□□ 0.44
UPF1-207ENST00000599848 RPL8P62917 257 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms