RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 ZNF93P35789 620 aaPredicted RBP16.53■□□□□ 0.24
PNKP-212ENST00000599454 PPP3R1P63098 170 aa16.53■□□□□ 0.24
PNKP-212ENST00000599454 ZNF260Q3ZCT1 412 aa16.53■□□□□ 0.24
PNKP-212ENST00000599454 ZNF497Q6ZNH5 498 aa16.53■□□□□ 0.24
PNKP-212ENST00000599454 SLC25A48Q6ZT89 311 aaKnown RBP16.53■□□□□ 0.24
PNKP-212ENST00000599454 STX19Q8N4C7 294 aa16.53■□□□□ 0.24
PNKP-212ENST00000599454 HSPB9Q9BQS6 159 aa16.53■□□□□ 0.24
PNKP-212ENST00000599454 CHCHD3Q9NX63 227 aaKnown RBP16.53■□□□□ 0.24
PNKP-212ENST00000599454 AASSQ9UDR5 926 aa16.53■□□□□ 0.24
PNKP-212ENST00000599454 GMPPBQ9Y5P6 360 aa16.53■□□□□ 0.24
PNKP-212ENST00000599454 MT-ND4P03905 459 aa16.52■□□□□ 0.24
PNKP-212ENST00000599454 OR8U8P0C7N1 319 aa16.52■□□□□ 0.24
PNKP-212ENST00000599454 ATAD3CQ5T2N8 411 aa16.52■□□□□ 0.24
PNKP-212ENST00000599454 DDI2Q5TDH0 399 aa16.52■□□□□ 0.24
PNKP-212ENST00000599454 OR11H1Q8NG94 326 aa16.52■□□□□ 0.24
PNKP-212ENST00000599454 MYOZ3Q8TDC0 251 aa16.52■□□□□ 0.24
PNKP-212ENST00000599454 NEK7Q8TDX7 302 aa16.52■□□□□ 0.24
PNKP-212ENST00000599454 CCDC107Q8WV48 283 aa16.52■□□□□ 0.24
PNKP-212ENST00000599454 RGP1Q92546 391 aaPredicted RBP16.52■□□□□ 0.24
PNKP-212ENST00000599454 TMEM106AQ96A25 262 aa16.52■□□□□ 0.24
PNKP-212ENST00000599454 UBE2E2Q96LR5 201 aa16.52■□□□□ 0.24
PNKP-212ENST00000599454 KCTD7Q96MP8 289 aa16.52■□□□□ 0.24
PNKP-212ENST00000599454 ASCL2Q99929 193 aa16.52■□□□□ 0.24
PNKP-212ENST00000599454 MRPS18AQ9NVS2 196 aaKnown RBP16.52■□□□□ 0.24
PNKP-212ENST00000599454 IGHV3-43A0A0B4J1X8 118 aa16.51■□□□□ 0.23
PNKP-212ENST00000599454 ZNF736B4DX44 427 aaPredicted RBP16.51■□□□□ 0.23
PNKP-212ENST00000599454 AIPO00170 330 aa16.51■□□□□ 0.23
PNKP-212ENST00000599454 IGHV3-43DP0DP04 118 aa16.51■□□□□ 0.23
PNKP-212ENST00000599454 SERPINA2P20848 420 aa16.51■□□□□ 0.23
PNKP-212ENST00000599454 CCDC58Q4VC31 144 aa16.51■□□□□ 0.23
PNKP-212ENST00000599454 RPL22L1Q6P5R6 122 aaKnown RBP16.51■□□□□ 0.23
PNKP-212ENST00000599454 UBALD1Q8TB05 177 aa16.51■□□□□ 0.23
PNKP-212ENST00000599454 SPACA1Q9HBV2 294 aa16.51■□□□□ 0.23
PNKP-212ENST00000599454 ZNF107Q9UII5 783 aaPredicted RBP16.51■□□□□ 0.23
PNKP-212ENST00000599454 RPL36Q9Y3U8 105 aaKnown RBP16.51■□□□□ 0.23
PNKP-212ENST00000599454 SMAD5-AS1Q9Y6J3 95 aa16.51■□□□□ 0.23
PNKP-212ENST00000599454 SPINT2O43291 252 aa16.5■□□□□ 0.23
PNKP-212ENST00000599454 GTF2F2P13984 249 aa16.5■□□□□ 0.23
PNKP-212ENST00000599454 BDKRB2P30411 391 aa16.5■□□□□ 0.23
PNKP-212ENST00000599454 GTF2A1P52655 376 aaPredicted RBP16.5■□□□□ 0.23
PNKP-212ENST00000599454 F2RL1P55085 397 aa16.5■□□□□ 0.23
PNKP-212ENST00000599454 RUNX1Q01196 453 aa16.5■□□□□ 0.23
PNKP-212ENST00000599454 GPR176Q14439 515 aa16.5■□□□□ 0.23
PNKP-212ENST00000599454 C6orf183Q5T699 404 aa16.5■□□□□ 0.23
PNKP-212ENST00000599454 STEAP3Q658P3 488 aa16.5■□□□□ 0.23
PNKP-212ENST00000599454 TRAT1Q6PIZ9 186 aa16.5■□□□□ 0.23
PNKP-212ENST00000599454 ZNF439Q8NDP4 499 aa16.5■□□□□ 0.23
PNKP-212ENST00000599454 OR52I1Q8NGK6 324 aa16.5■□□□□ 0.23
PNKP-212ENST00000599454 RHOXF1Q8NHV9 184 aa16.5■□□□□ 0.23
PNKP-212ENST00000599454 PYDC1Q8WXC3 89 aa16.5■□□□□ 0.23
PNKP-212ENST00000599454 AMBNQ9NP70 447 aa16.5■□□□□ 0.23
PNKP-212ENST00000599454 GNG12Q9UBI6 72 aa16.5■□□□□ 0.23
PNKP-212ENST00000599454 SLC31A2O15432 143 aa16.49■□□□□ 0.23
PNKP-212ENST00000599454 VHLP40337 213 aa16.49■□□□□ 0.23
PNKP-212ENST00000599454 FAM53AQ6NSI3 398 aaPredicted RBP16.49■□□□□ 0.23
PNKP-212ENST00000599454 TMEM65Q6PI78 240 aa16.49■□□□□ 0.23
PNKP-212ENST00000599454 RCC2Q9P258 522 aaKnown RBP16.49■□□□□ 0.23
PNKP-212ENST00000599454 TRAPPC2LQ9UL33 140 aa16.49■□□□□ 0.23
PNKP-212ENST00000599454 VSIG4Q9Y279 399 aa16.49■□□□□ 0.23
PNKP-212ENST00000599454 C12orf77C9JDV5 145 aa16.48■□□□□ 0.23
PNKP-212ENST00000599454 MCRIP1C9JLW8 97 aa16.48■□□□□ 0.23
PNKP-212ENST00000599454 LANCL1O43813 399 aa16.48■□□□□ 0.23
PNKP-212ENST00000599454 LY86O95711 162 aa16.48■□□□□ 0.23
PNKP-212ENST00000599454 LIMS3P0CW19 117 aa16.48■□□□□ 0.23
PNKP-212ENST00000599454 LIMS4P0CW20 117 aa16.48■□□□□ 0.23
PNKP-212ENST00000599454 PPIFP30405 207 aaKnown RBP16.48■□□□□ 0.23
PNKP-212ENST00000599454 ZNF616Q08AN1 781 aa16.48■□□□□ 0.23
PNKP-212ENST00000599454 LSAMPQ13449 338 aa16.48■□□□□ 0.23
PNKP-212ENST00000599454 SLC22A6Q4U2R8 563 aa16.48■□□□□ 0.23
PNKP-212ENST00000599454 CT45A1Q5HYN5 189 aa16.48■□□□□ 0.23
PNKP-212ENST00000599454 FAM27D1Q5T7N8 215 aa16.48■□□□□ 0.23
PNKP-212ENST00000599454 ZNF429Q86V71 674 aa16.48■□□□□ 0.23
PNKP-212ENST00000599454 CBR4Q8N4T8 237 aa16.48■□□□□ 0.23
PNKP-212ENST00000599454 OR1N2Q8NGR9 330 aa16.48■□□□□ 0.23
PNKP-212ENST00000599454 CT45A3Q8NHU0 189 aa16.48■□□□□ 0.23
PNKP-212ENST00000599454 MUC7Q8TAX7 377 aa16.48■□□□□ 0.23
PNKP-212ENST00000599454 MRPS24Q96EL2 167 aaKnown RBP16.48■□□□□ 0.23
PNKP-212ENST00000599454 I3L521 148 aa16.47■□□□□ 0.23
PNKP-212ENST00000599454 ZNF134P52741 427 aa16.47■□□□□ 0.23
PNKP-212ENST00000599454 RIPK1Q13546 671 aa16.47■□□□□ 0.23
PNKP-212ENST00000599454 MMDQ15546 238 aa16.47■□□□□ 0.23
PNKP-212ENST00000599454 SYT6Q5T7P8 510 aaPredicted RBP16.47■□□□□ 0.23
PNKP-212ENST00000599454 ZNF491Q8N8L2 437 aa16.47■□□□□ 0.23
PNKP-212ENST00000599454 CA11O75493 328 aa16.46■□□□□ 0.23
PNKP-212ENST00000599454 KIAA0141Q14154 515 aaPredicted RBP16.46■□□□□ 0.23
PNKP-212ENST00000599454 ZFP1Q6P2D0 407 aa16.46■□□□□ 0.23
PNKP-212ENST00000599454 GAPTQ8N292 157 aa16.46■□□□□ 0.23
PNKP-212ENST00000599454 ZNF184Q99676 751 aaPredicted RBP16.46■□□□□ 0.23
PNKP-212ENST00000599454 FGF20Q9NP95 211 aaPredicted RBP16.46■□□□□ 0.23
PNKP-212ENST00000599454 ETAA1Q9NY74 926 aa16.46■□□□□ 0.23
PNKP-212ENST00000599454 A0A1W2PP11 408 aa16.45■□□□□ 0.22
PNKP-212ENST00000599454 IGLV1-40P01703 118 aa16.45■□□□□ 0.22
PNKP-212ENST00000599454 HLA-DRB1P01911 266 aa16.45■□□□□ 0.22
PNKP-212ENST00000599454 HBZP02008 142 aa16.45■□□□□ 0.22
PNKP-212ENST00000599454 SLC2A2P11168 524 aaPredicted RBP16.45■□□□□ 0.22
PNKP-212ENST00000599454 IGFBP3P17936 291 aaPredicted RBP16.45■□□□□ 0.22
PNKP-212ENST00000599454 CASC10Q5T4H9 136 aa16.45■□□□□ 0.22
PNKP-212ENST00000599454 ASPHD1Q5U4P2 390 aa16.45■□□□□ 0.22
PNKP-212ENST00000599454 XAF1Q6GPH4 301 aa16.45■□□□□ 0.22
PNKP-212ENST00000599454 TMPRSS11AQ6ZMR5 421 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms