RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 ZNF565Q8N9K5 539 aa12.28□□□□□ -0.44
DDX49-204ENST00000595858 ZNF714Q96N38 554 aa12.28□□□□□ -0.44
DDX49-204ENST00000595858 PCGF1Q9BSM1 259 aa12.28□□□□□ -0.44
DDX49-204ENST00000595858 TRAV39A0A0B4J263 110 aa12.27□□□□□ -0.44
DDX49-204ENST00000595858 INAFM1C9JVW0 142 aa12.27□□□□□ -0.44
DDX49-204ENST00000595858 SCGNO76038 276 aa12.27□□□□□ -0.44
DDX49-204ENST00000595858 CGB3P0DN86 165 aa12.27□□□□□ -0.44
DDX49-204ENST00000595858 CGB7P0DN87 165 aa12.27□□□□□ -0.44
DDX49-204ENST00000595858 SLC6A1P30531 599 aa12.27□□□□□ -0.44
DDX49-204ENST00000595858 ERVFRD-1P60508 538 aa12.27□□□□□ -0.44
DDX49-204ENST00000595858 RRAS2P62070 204 aaPredicted RBP12.27□□□□□ -0.44
DDX49-204ENST00000595858 UBE2NLQ5JXB2 153 aa12.27□□□□□ -0.44
DDX49-204ENST00000595858 PYHIN1Q6K0P9 492 aa12.27□□□□□ -0.44
DDX49-204ENST00000595858 OR13A1Q8NGR1 328 aa12.27□□□□□ -0.44
DDX49-204ENST00000595858 ZFAND1Q8TCF1 268 aa12.27□□□□□ -0.44
DDX49-204ENST00000595858 CCDC107Q8WV48 283 aa12.27□□□□□ -0.44
DDX49-204ENST00000595858 PHF21AQ96BD5 680 aa12.27□□□□□ -0.44
DDX49-204ENST00000595858 UPRTQ96BW1 309 aa12.27□□□□□ -0.44
DDX49-204ENST00000595858 TBX15Q96SF7 602 aa12.27□□□□□ -0.44
DDX49-204ENST00000595858 THAP7Q9BT49 309 aaPredicted RBP12.27□□□□□ -0.44
DDX49-204ENST00000595858 TAS2R3Q9NYW6 316 aa12.27□□□□□ -0.44
DDX49-204ENST00000595858 RABL2AQ9UBK7 228 aaPredicted RBP12.27□□□□□ -0.44
DDX49-204ENST00000595858 AK3Q9UIJ7 227 aa12.27□□□□□ -0.44
DDX49-204ENST00000595858 RABL2BQ9UNT1 228 aa12.27□□□□□ -0.44
DDX49-204ENST00000595858 TEP1Q99973 2627 aaKnown RBP12.27□□□□□ -0.44
DDX49-204ENST00000595858 MTORP42345 2549 aa12.27□□□□□ -0.44
DDX49-204ENST00000595858 C17orf98A8MV24 154 aa12.27□□□□□ -0.45
DDX49-204ENST00000595858 INMT-MINDY4F8WBC2 141 aa12.27□□□□□ -0.45
DDX49-204ENST00000595858 HIST1H1DP16402 221 aaKnown RBP12.27□□□□□ -0.45
DDX49-204ENST00000595858 GNB3P16520 340 aa12.27□□□□□ -0.45
DDX49-204ENST00000595858 GLP1RP43220 463 aa12.27□□□□□ -0.45
DDX49-204ENST00000595858 OLFML2AQ68BL7 652 aa12.27□□□□□ -0.45
DDX49-204ENST00000595858 VMO1Q7Z5L0 202 aa12.27□□□□□ -0.45
DDX49-204ENST00000595858 OR4K15Q8NH41 348 aa12.27□□□□□ -0.45
DDX49-204ENST00000595858 METTL8Q9H825 291 aaKnown RBP12.27□□□□□ -0.45
DDX49-204ENST00000595858 ZMAT3Q9HA38 289 aaKnown RBP12.27□□□□□ -0.45
DDX49-204ENST00000595858 TRAPPC2LQ9UL33 140 aa12.27□□□□□ -0.45
DDX49-204ENST00000595858 A0A0A6YYH2 397 aa12.26□□□□□ -0.45
DDX49-204ENST00000595858 hCG_1809904A0A1W2PP81 198 aa12.26□□□□□ -0.45
DDX49-204ENST00000595858 A0A1W2PPE2 198 aa12.26□□□□□ -0.45
DDX49-204ENST00000595858 A0A1W2PR64 198 aa12.26□□□□□ -0.45
DDX49-204ENST00000595858 A0A1W2PRV1 198 aa12.26□□□□□ -0.45
DDX49-204ENST00000595858 A6NJ64 397 aa12.26□□□□□ -0.45
DDX49-204ENST00000595858 MFNGO00587 321 aa12.26□□□□□ -0.45
DDX49-204ENST00000595858 GZMHP20718 246 aa12.26□□□□□ -0.45
DDX49-204ENST00000595858 PRTN3P24158 256 aa12.26□□□□□ -0.45
DDX49-204ENST00000595858 DLX1P56177 255 aa12.26□□□□□ -0.45
DDX49-204ENST00000595858 CDNFQ49AH0 187 aa12.26□□□□□ -0.45
DDX49-204ENST00000595858 BAIAP2L2Q6UXY1 529 aa12.26□□□□□ -0.45
DDX49-204ENST00000595858 IL17RELQ6ZVW7 336 aa12.26□□□□□ -0.45
DDX49-204ENST00000595858 MRPL30Q8TCC3 161 aaKnown RBP12.26□□□□□ -0.45
DDX49-204ENST00000595858 MRGPRDQ8TDS7 321 aa12.26□□□□□ -0.45
DDX49-204ENST00000595858 S100A16Q96FQ6 103 aaKnown RBP12.26□□□□□ -0.45
DDX49-204ENST00000595858 CMTM3Q96MX0 182 aa12.26□□□□□ -0.45
DDX49-204ENST00000595858 GAL3ST2Q9H3Q3 398 aa12.26□□□□□ -0.45
DDX49-204ENST00000595858 UNKLQ9H9P5 680 aaKnown RBP12.26□□□□□ -0.45
DDX49-204ENST00000595858 DIABLOQ9NR28 239 aa12.26□□□□□ -0.45
DDX49-204ENST00000595858 SIRT7Q9NRC8 400 aa12.26□□□□□ -0.45
DDX49-204ENST00000595858 ZNF729A6NN14 1252 aaPredicted RBP12.25□□□□□ -0.45
DDX49-204ENST00000595858 SERPINE3A8MV23 424 aa12.25□□□□□ -0.45
DDX49-204ENST00000595858 NAPSAO96009 420 aa12.25□□□□□ -0.45
DDX49-204ENST00000595858 RBP4P02753 201 aa12.25□□□□□ -0.45
DDX49-204ENST00000595858 HNF1AP20823 631 aa12.25□□□□□ -0.45
DDX49-204ENST00000595858 CDK2P24941 298 aa12.25□□□□□ -0.45
DDX49-204ENST00000595858 PITPNAQ00169 270 aa12.25□□□□□ -0.45
DDX49-204ENST00000595858 ARL6IP1Q15041 203 aa12.25□□□□□ -0.45
DDX49-204ENST00000595858 C17orf58Q2M2W7 97 aa12.25□□□□□ -0.45
DDX49-204ENST00000595858 PLA1AQ53H76 456 aa12.25□□□□□ -0.45
DDX49-204ENST00000595858 NANPQ8TBE9 248 aa12.25□□□□□ -0.45
DDX49-204ENST00000595858 TNFRSF14Q92956 283 aa12.25□□□□□ -0.45
DDX49-204ENST00000595858 CMSS1Q9BQ75 279 aaKnown RBP12.25□□□□□ -0.45
DDX49-204ENST00000595858 HDHD3Q9BSH5 251 aaPredicted RBP12.25□□□□□ -0.45
DDX49-204ENST00000595858 RIMS4Q9H426 269 aaPredicted RBP12.25□□□□□ -0.45
DDX49-204ENST00000595858 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.25□□□□□ -0.45
DDX49-204ENST00000595858 TRAV18A0A075B6X5 111 aa12.25□□□□□ -0.45
DDX49-204ENST00000595858 KBTBD11-OT1A0A1B0GTJ5 212 aa12.25□□□□□ -0.45
DDX49-204ENST00000595858 EIF4EP06730 217 aaKnown RBP12.25□□□□□ -0.45
DDX49-204ENST00000595858 RCC1P18754 421 aaPredicted RBP12.25□□□□□ -0.45
DDX49-204ENST00000595858 PRB3Q04118 309 aaPredicted RBP12.25□□□□□ -0.45
DDX49-204ENST00000595858 MADCAM1Q13477 382 aa12.25□□□□□ -0.45
DDX49-204ENST00000595858 ZNF260Q3ZCT1 412 aa12.25□□□□□ -0.45
DDX49-204ENST00000595858 KLF17Q5JT82 389 aaPredicted RBP12.25□□□□□ -0.45
DDX49-204ENST00000595858 TEX29Q8N6K0 151 aa12.25□□□□□ -0.45
DDX49-204ENST00000595858 BEX2Q9BXY8 128 aa12.25□□□□□ -0.45
DDX49-204ENST00000595858 MBNL3Q9NUK0 354 aaKnown RBP12.25□□□□□ -0.45
DDX49-204ENST00000595858 CALYQ9NYX4 217 aa12.25□□□□□ -0.45
DDX49-204ENST00000595858 COPZ2Q9P299 210 aa12.25□□□□□ -0.45
DDX49-204ENST00000595858 CDC42EP3Q9UKI2 254 aa12.25□□□□□ -0.45
DDX49-204ENST00000595858 ELF5Q9UKW6 265 aaPredicted RBP12.25□□□□□ -0.45
DDX49-204ENST00000595858 FN1P02751 2386 aaKnown RBP12.24□□□□□ -0.45
DDX49-204ENST00000595858 TRBV6-6A0A0A6YYG2 114 aa12.24□□□□□ -0.45
DDX49-204ENST00000595858 ANKRD34BA5PLL1 514 aa12.24□□□□□ -0.45
DDX49-204ENST00000595858 XRCC3O43542 346 aa12.24□□□□□ -0.45
DDX49-204ENST00000595858 MMP23AO75900 390 aa12.24□□□□□ -0.45
DDX49-204ENST00000595858 DHFRP00374 187 aa12.24□□□□□ -0.45
DDX49-204ENST00000595858 FSHBP01225 129 aa12.24□□□□□ -0.45
DDX49-204ENST00000595858 IGHV1-8P0DP01 117 aa12.24□□□□□ -0.45
DDX49-204ENST00000595858 OMGP23515 440 aa12.24□□□□□ -0.45
DDX49-204ENST00000595858 THOC7Q6I9Y2 204 aaKnown RBP12.24□□□□□ -0.45
DDX49-204ENST00000595858 HEPN1Q6WQI6 88 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms