RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 TLNRD1Q9H1K6 362 aa16.64■□□□□ 0.25
MBD3-209ENST00000592012 FAM215AQ9Y5M1 114 aa16.64■□□□□ 0.25
MBD3-209ENST00000592012 WNT9BO14905 357 aa16.63■□□□□ 0.25
MBD3-209ENST00000592012 SIGLEC5O15389 551 aa16.63■□□□□ 0.25
MBD3-209ENST00000592012 LMO1P25800 156 aa16.63■□□□□ 0.25
MBD3-209ENST00000592012 NKX2-1P43699 371 aaPredicted RBP16.63■□□□□ 0.25
MBD3-209ENST00000592012 CEBPDP49716 269 aaPredicted RBP16.63■□□□□ 0.25
MBD3-209ENST00000592012 SULT1A2P50226 295 aa16.63■□□□□ 0.25
MBD3-209ENST00000592012 MBNL2Q5VZF2 373 aaKnown RBP16.63■□□□□ 0.25
MBD3-209ENST00000592012 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.63■□□□□ 0.25
MBD3-209ENST00000592012 ARV1Q9H2C2 271 aa16.63■□□□□ 0.25
MBD3-209ENST00000592012 WFDC1Q9HC57 220 aa16.63■□□□□ 0.25
MBD3-209ENST00000592012 MSL2Q9HCI7 577 aa16.63■□□□□ 0.25
MBD3-209ENST00000592012 GLS2Q9UI32 602 aa16.63■□□□□ 0.25
MBD3-209ENST00000592012 SPTBN2O15020 2390 aa16.63■□□□□ 0.25
MBD3-209ENST00000592012 HOXA4Q00056 320 aaPredicted RBP16.63■□□□□ 0.25
MBD3-209ENST00000592012 NHLH2Q02577 135 aa16.63■□□□□ 0.25
MBD3-209ENST00000592012 FIP1L1Q6UN15 594 aaKnown RBP16.63■□□□□ 0.25
MBD3-209ENST00000592012 RPRMLQ8N4K4 120 aa16.63■□□□□ 0.25
MBD3-209ENST00000592012 IL22RA2Q969J5 263 aa16.63■□□□□ 0.25
MBD3-209ENST00000592012 MMP26Q9NRE1 261 aa16.63■□□□□ 0.25
MBD3-209ENST00000592012 NUDT19A8MXV4 375 aa16.62■□□□□ 0.25
MBD3-209ENST00000592012 HEXAP06865 529 aa16.62■□□□□ 0.25
MBD3-209ENST00000592012 S100GP29377 79 aa16.62■□□□□ 0.25
MBD3-209ENST00000592012 GCH1P30793 250 aa16.62■□□□□ 0.25
MBD3-209ENST00000592012 BTN1A1Q13410 526 aa16.62■□□□□ 0.25
MBD3-209ENST00000592012 PXDC1Q5TGL8 231 aa16.62■□□□□ 0.25
MBD3-209ENST00000592012 WDR82Q6UXN9 313 aa16.62■□□□□ 0.25
MBD3-209ENST00000592012 NARS2Q96I59 477 aaKnown RBP16.62■□□□□ 0.25
MBD3-209ENST00000592012 ANKRD11Q6UB99 2663 aaPredicted RBP16.62■□□□□ 0.25
MBD3-209ENST00000592012 POLR2GP62487 172 aaKnown RBP eCLIP16.62■□□□□ 0.25
MBD3-209ENST00000592012 HMGN3Q15651 99 aa16.62■□□□□ 0.25
MBD3-209ENST00000592012 CXorf66Q5JRM2 361 aaPredicted RBP16.62■□□□□ 0.25
MBD3-209ENST00000592012 PRAMEF6Q5VXH4 476 aa16.62■□□□□ 0.25
MBD3-209ENST00000592012 ZNF474Q6S9Z5 364 aaPredicted RBP16.62■□□□□ 0.25
MBD3-209ENST00000592012 C1orf174Q8IYL3 243 aa16.62■□□□□ 0.25
MBD3-209ENST00000592012 UBALD1Q8TB05 177 aa16.62■□□□□ 0.25
MBD3-209ENST00000592012 LPAR6P43657 344 aa16.61■□□□□ 0.25
MBD3-209ENST00000592012 AKR1C2P52895 323 aa16.61■□□□□ 0.25
MBD3-209ENST00000592012 AKR1C1Q04828 323 aa16.61■□□□□ 0.25
MBD3-209ENST00000592012 ACP7Q6ZNF0 438 aa16.61■□□□□ 0.25
MBD3-209ENST00000592012 SPEF1Q9Y4P9 236 aa16.61■□□□□ 0.25
MBD3-209ENST00000592012 ATMQ13315 3056 aa16.61■□□□□ 0.25
MBD3-209ENST00000592012 DCHS1Q96JQ0 3298 aa16.61■□□□□ 0.25
MBD3-209ENST00000592012 A0A1B0GWJ7 208 aa16.6■□□□□ 0.25
MBD3-209ENST00000592012 TMEM218A2RU14 115 aa16.6■□□□□ 0.25
MBD3-209ENST00000592012 A6NLC8 198 aa16.6■□□□□ 0.25
MBD3-209ENST00000592012 HSPA12AO43301 675 aa16.6■□□□□ 0.25
MBD3-209ENST00000592012 WNT2P09544 360 aa16.6■□□□□ 0.25
MBD3-209ENST00000592012 SRSF3P84103 164 aaKnown RBP16.6■□□□□ 0.25
MBD3-209ENST00000592012 ATRAIDQ6UW56 229 aa16.6■□□□□ 0.25
MBD3-209ENST00000592012 OR2C3Q8N628 320 aa16.6■□□□□ 0.25
MBD3-209ENST00000592012 OR51H1Q8NH63 302 aa16.6■□□□□ 0.25
MBD3-209ENST00000592012 SNIP1Q8TAD8 396 aaKnown RBP16.6■□□□□ 0.25
MBD3-209ENST00000592012 HRH4Q9H3N8 390 aa16.6■□□□□ 0.25
MBD3-209ENST00000592012 LUZP4Q9P127 313 aa16.6■□□□□ 0.25
MBD3-209ENST00000592012 DMXL2Q8TDJ6 3036 aa16.6■□□□□ 0.25
MBD3-209ENST00000592012 MED6O75586 246 aa16.6■□□□□ 0.25
MBD3-209ENST00000592012 ID3Q02535 119 aa16.6■□□□□ 0.25
MBD3-209ENST00000592012 IL34Q6ZMJ4 242 aa16.6■□□□□ 0.25
MBD3-209ENST00000592012 ABHD14BQ96IU4 210 aa16.6■□□□□ 0.25
MBD3-209ENST00000592012 UFSP2Q9NUQ7 469 aa16.6■□□□□ 0.25
MBD3-209ENST00000592012 WASF3Q9UPY6 502 aa16.6■□□□□ 0.25
MBD3-209ENST00000592012 CHD3Q12873 2000 aaKnown RBP16.6■□□□□ 0.25
MBD3-209ENST00000592012 PROB1E7EW31 1015 aa16.59■□□□□ 0.25
MBD3-209ENST00000592012 ABCD4O14678 606 aa16.59■□□□□ 0.25
MBD3-209ENST00000592012 CEACAM6P40199 344 aa16.59■□□□□ 0.25
MBD3-209ENST00000592012 ARHGDIBP52566 201 aa16.59■□□□□ 0.25
MBD3-209ENST00000592012 PJVKQ0ZLH3 352 aa16.59■□□□□ 0.25
MBD3-209ENST00000592012 AKR1E2Q96JD6 320 aa16.59■□□□□ 0.25
MBD3-209ENST00000592012 PARP12Q9H0J9 701 aaKnown RBP16.59■□□□□ 0.25
MBD3-209ENST00000592012 ACACAQ13085 2346 aa16.59■□□□□ 0.25
MBD3-209ENST00000592012 BORCS7-ASMTA0A0B4J1R7 106 aa16.59■□□□□ 0.25
MBD3-209ENST00000592012 CRYABP02511 175 aaKnown RBP16.59■□□□□ 0.25
MBD3-209ENST00000592012 PSG2P11465 335 aa16.59■□□□□ 0.25
MBD3-209ENST00000592012 EWSR1Q01844 656 aaKnown RBP eCLIP16.59■□□□□ 0.254e-7■□□□□ 8.7
MBD3-209ENST00000592012 C1orf185Q5T7R7 199 aa16.59■□□□□ 0.25
MBD3-209ENST00000592012 S100PBPQ96BU1 408 aa16.59■□□□□ 0.25
MBD3-209ENST00000592012 GINS3Q9BRX5 216 aa16.59■□□□□ 0.25
MBD3-209ENST00000592012 MAGT1Q9H0U3 335 aa16.59■□□□□ 0.25
MBD3-209ENST00000592012 TMEM30CPA0ZSE6 113 aa16.58■□□□□ 0.25
MBD3-209ENST00000592012 FAM24AA6NFZ4 105 aa16.58■□□□□ 0.25
MBD3-209ENST00000592012 SERPINE2P07093 398 aa16.58■□□□□ 0.25
MBD3-209ENST00000592012 TIMP3P35625 211 aa16.58■□□□□ 0.25
MBD3-209ENST00000592012 EIF2S3LQ2VIR3 472 aaKnown RBP16.58■□□□□ 0.25
MBD3-209ENST00000592012 TIMM23BQ5SRD1 257 aa16.58■□□□□ 0.25
MBD3-209ENST00000592012 PRR7Q8TB68 274 aa16.58■□□□□ 0.25
MBD3-209ENST00000592012 LRRC46Q96FV0 321 aa16.58■□□□□ 0.25
MBD3-209ENST00000592012 NBEAQ8NFP9 2946 aa16.58■□□□□ 0.24
MBD3-209ENST00000592012 SSSCA1O60232 199 aa16.58■□□□□ 0.24
MBD3-209ENST00000592012 PTBP3O95758 552 aaKnown RBP16.58■□□□□ 0.24
MBD3-209ENST00000592012 OR8U9P0C7N5 309 aa16.58■□□□□ 0.24
MBD3-209ENST00000592012 PVALBP20472 110 aaPredicted RBP16.58■□□□□ 0.24
MBD3-209ENST00000592012 BLOC1S1P78537 153 aa16.58■□□□□ 0.24
MBD3-209ENST00000592012 MSMPQ1L6U9 139 aa16.58■□□□□ 0.24
MBD3-209ENST00000592012 OR8U1Q8NH10 309 aa16.58■□□□□ 0.24
MBD3-209ENST00000592012 PARP11Q9NR21 331 aa16.58■□□□□ 0.24
MBD3-209ENST00000592012 PPP1R3CQ9UQK1 317 aa16.58■□□□□ 0.24
MBD3-209ENST00000592012 APC2O95996 2303 aa16.57■□□□□ 0.24
MBD3-209ENST00000592012 A0A0G2JRQ6 117 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms