RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 CGB3P0DN86 165 aa25.72■■□□□ 1.71
CAPNS1-206ENST00000588815 CGB7P0DN87 165 aa25.72■■□□□ 1.71
CAPNS1-206ENST00000588815 NPY4RP50391 375 aa25.72■■□□□ 1.71
CAPNS1-206ENST00000588815 RAB25P57735 213 aa25.72■■□□□ 1.71
CAPNS1-206ENST00000588815 TMEM30BQ3MIR4 351 aa25.72■■□□□ 1.71
CAPNS1-206ENST00000588815 H1FOOQ8IZA3 346 aaPredicted RBP25.72■■□□□ 1.71
CAPNS1-206ENST00000588815 OR8B3Q8NGG8 313 aa25.72■■□□□ 1.71
CAPNS1-206ENST00000588815 ZFAND1Q8TCF1 268 aa25.72■■□□□ 1.71
CAPNS1-206ENST00000588815 OR8B2Q96RD0 313 aa25.72■■□□□ 1.71
CAPNS1-206ENST00000588815 LIME1Q9H400 295 aa25.72■■□□□ 1.71
CAPNS1-206ENST00000588815 TAS2R3Q9NYW6 316 aa25.72■■□□□ 1.71
CAPNS1-206ENST00000588815 VSIG4Q9Y279 399 aa25.72■■□□□ 1.71
CAPNS1-206ENST00000588815 TRBV23-1A0A0A0MS06 115 aa25.71■■□□□ 1.71
CAPNS1-206ENST00000588815 C7orf66A4D0T2 115 aa25.71■■□□□ 1.71
CAPNS1-206ENST00000588815 ZNF729A6NN14 1252 aaPredicted RBP25.71■■□□□ 1.71
CAPNS1-206ENST00000588815 COL8A1P27658 744 aa25.71■■□□□ 1.71
CAPNS1-206ENST00000588815 PDLIM4P50479 330 aa25.71■■□□□ 1.71
CAPNS1-206ENST00000588815 METTL11BQ5VVY1 283 aa25.71■■□□□ 1.71
CAPNS1-206ENST00000588815 LPCAT3Q6P1A2 487 aa25.71■■□□□ 1.71
CAPNS1-206ENST00000588815 FAHD2BQ6P2I3 314 aaPredicted RBP25.71■■□□□ 1.71
CAPNS1-206ENST00000588815 PRR18Q8N4B5 295 aa25.71■■□□□ 1.71
CAPNS1-206ENST00000588815 FAHD2AQ96GK7 314 aa25.71■■□□□ 1.71
CAPNS1-206ENST00000588815 ARID1AO14497 2285 aa25.7■■□□□ 1.7
CAPNS1-206ENST00000588815 A0A0B4J293 547 aa25.7■■□□□ 1.7
CAPNS1-206ENST00000588815 HSPA12AO43301 675 aa25.7■■□□□ 1.7
CAPNS1-206ENST00000588815 NFYAP23511 347 aaPredicted RBP25.7■■□□□ 1.7
CAPNS1-206ENST00000588815 BCAP31P51572 246 aa25.7■■□□□ 1.7
CAPNS1-206ENST00000588815 TAS2R31P59538 309 aa25.7■■□□□ 1.7
CAPNS1-206ENST00000588815 UBE2MP61081 183 aaKnown RBP25.7■■□□□ 1.7
CAPNS1-206ENST00000588815 RPL31P62899 125 aaKnown RBP25.7■■□□□ 1.7
CAPNS1-206ENST00000588815 C11orf91Q3C1V1 193 aa25.7■■□□□ 1.7
CAPNS1-206ENST00000588815 ZNF787Q6DD87 383 aa25.7■■□□□ 1.7
CAPNS1-206ENST00000588815 LINC00574Q9H8X3 128 aa25.7■■□□□ 1.7
CAPNS1-206ENST00000588815 ZNF69Q9UC07 566 aa25.7■■□□□ 1.7
CAPNS1-206ENST00000588815 FAM172BPA6NC97 362 aa25.69■■□□□ 1.7
CAPNS1-206ENST00000588815 WNT2P09544 360 aa25.69■■□□□ 1.7
CAPNS1-206ENST00000588815 AADACP22760 399 aa25.69■■□□□ 1.7
CAPNS1-206ENST00000588815 CARTPTQ16568 116 aa25.69■■□□□ 1.7
CAPNS1-206ENST00000588815 GLDNQ6ZMI3 551 aaPredicted RBP25.69■■□□□ 1.7
CAPNS1-206ENST00000588815 OR1L1Q8NH94 360 aa25.69■■□□□ 1.7
CAPNS1-206ENST00000588815 FAM216AQ8WUB2 273 aa25.69■■□□□ 1.7
CAPNS1-206ENST00000588815 NINJ1Q92982 152 aa25.69■■□□□ 1.7
CAPNS1-206ENST00000588815 TMPRSS13Q9BYE2 586 aa25.69■■□□□ 1.7
CAPNS1-206ENST00000588815 PATZ1Q9HBE1 687 aaKnown RBP25.69■■□□□ 1.7
CAPNS1-206ENST00000588815 GPN1Q9HCN4 374 aaPredicted RBP25.69■■□□□ 1.7
CAPNS1-206ENST00000588815 CALYQ9NYX4 217 aa25.69■■□□□ 1.7
CAPNS1-206ENST00000588815 OR2W1Q9Y3N9 320 aa25.69■■□□□ 1.7
CAPNS1-206ENST00000588815 UTP20O75691 2785 aaKnown RBP25.69■■□□□ 1.7
CAPNS1-206ENST00000588815 HELZ2Q9BYK8 2649 aaKnown RBP25.69■■□□□ 1.7
CAPNS1-206ENST00000588815 TENM4Q6N022 2769 aa25.68■■□□□ 1.7
CAPNS1-206ENST00000588815 KBTBD11-OT1A0A1B0GTJ5 212 aa25.68■■□□□ 1.7
CAPNS1-206ENST00000588815 F2RL2O00254 374 aa25.68■■□□□ 1.7
CAPNS1-206ENST00000588815 FCN3O75636 299 aa25.68■■□□□ 1.7
CAPNS1-206ENST00000588815 ZNF728P0DKX0 622 aa25.68■■□□□ 1.7
CAPNS1-206ENST00000588815 SSTR5P35346 364 aa25.68■■□□□ 1.7
CAPNS1-206ENST00000588815 ZNF841Q6ZN19 808 aa25.68■■□□□ 1.7
CAPNS1-206ENST00000588815 C5orf24Q7Z6I8 188 aa25.68■■□□□ 1.7
CAPNS1-206ENST00000588815 SLC25A42Q86VD7 318 aa25.68■■□□□ 1.7
CAPNS1-206ENST00000588815 CADM3Q8N126 398 aa25.68■■□□□ 1.7
CAPNS1-206ENST00000588815 DCTN5Q9BTE1 182 aa25.68■■□□□ 1.7
CAPNS1-206ENST00000588815 FXYD6Q9H0Q3 95 aa25.68■■□□□ 1.7
CAPNS1-206ENST00000588815 CLN8Q9UBY8 286 aa25.68■■□□□ 1.7
CAPNS1-206ENST00000588815 C14orf166Q9Y224 244 aaKnown RBP25.68■■□□□ 1.7
CAPNS1-206ENST00000588815 ALG5Q9Y673 324 aa25.68■■□□□ 1.7
CAPNS1-206ENST00000588815 NDUFS8O00217 210 aa25.67■■□□□ 1.7
CAPNS1-206ENST00000588815 CTSDP07339 412 aaPredicted RBP25.67■■□□□ 1.7
CAPNS1-206ENST00000588815 PGAM2P15259 253 aa25.67■■□□□ 1.7
CAPNS1-206ENST00000588815 ANXA7P20073 488 aaKnown RBP25.67■■□□□ 1.7
CAPNS1-206ENST00000588815 SLC38A6Q8IZM9 456 aa25.67■■□□□ 1.7
CAPNS1-206ENST00000588815 ZNF486Q96H40 463 aaPredicted RBP25.67■■□□□ 1.7
CAPNS1-206ENST00000588815 GAL3ST2Q9H3Q3 398 aa25.67■■□□□ 1.7
CAPNS1-206ENST00000588815 JPT1Q9UK76 154 aa25.67■■□□□ 1.7
CAPNS1-206ENST00000588815 F5H0A9 414 aaPredicted RBP25.66■■□□□ 1.7
CAPNS1-206ENST00000588815 ATP5J2P56134 94 aa25.66■■□□□ 1.7
CAPNS1-206ENST00000588815 TMED4Q7Z7H5 227 aa25.66■■□□□ 1.7
CAPNS1-206ENST00000588815 ZNF525Q8N782 197 aa25.66■■□□□ 1.7
CAPNS1-206ENST00000588815 OR10A7Q8NGE5 316 aa25.66■■□□□ 1.7
CAPNS1-206ENST00000588815 H1FXQ92522 213 aaKnown RBP25.66■■□□□ 1.7
CAPNS1-206ENST00000588815 MARVELD3Q96A59 401 aa25.66■■□□□ 1.7
CAPNS1-206ENST00000588815 GSX2Q9BZM3 304 aa25.66■■□□□ 1.7
CAPNS1-206ENST00000588815 C5orf66Q9H5L9 145 aa25.66■■□□□ 1.7
CAPNS1-206ENST00000588815 SNRPGP15A8MWD9 76 aa25.66■■□□□ 1.7
CAPNS1-206ENST00000588815 CEACAM6P40199 344 aa25.66■■□□□ 1.7
CAPNS1-206ENST00000588815 FXYD4P59646 89 aa25.66■■□□□ 1.7
CAPNS1-206ENST00000588815 C17orf58Q2M2W7 97 aa25.66■■□□□ 1.7
CAPNS1-206ENST00000588815 TCF23Q7RTU1 214 aa25.66■■□□□ 1.7
CAPNS1-206ENST00000588815 FGFRL1Q8N441 504 aa25.66■■□□□ 1.7
CAPNS1-206ENST00000588815 CHAC2Q8WUX2 184 aa25.66■■□□□ 1.7
CAPNS1-206ENST00000588815 GHITMQ9H3K2 345 aa25.66■■□□□ 1.7
CAPNS1-206ENST00000588815 OR1A1Q9P1Q5 309 aa25.66■■□□□ 1.7
CAPNS1-206ENST00000588815 MALRD1Q5VYJ5 2156 aa25.66■■□□□ 1.7
CAPNS1-206ENST00000588815 TMEM128Q5BJH2 165 aa25.65■■□□□ 1.7
CAPNS1-206ENST00000588815 TOMM40LQ969M1 308 aa25.65■■□□□ 1.7
CAPNS1-206ENST00000588815 OR2S2Q9NQN1 319 aa25.65■■□□□ 1.7
CAPNS1-206ENST00000588815 C19orf12Q9NSK7 152 aa25.65■■□□□ 1.7
CAPNS1-206ENST00000588815 RDH8Q9NYR8 311 aa25.65■■□□□ 1.7
CAPNS1-206ENST00000588815 A0A0A6YYJ9 748 aa25.64■■□□□ 1.69
CAPNS1-206ENST00000588815 OR4E1P0C645 316 aa25.64■■□□□ 1.69
CAPNS1-206ENST00000588815 WDR25Q64LD2 544 aaPredicted RBP25.64■■□□□ 1.69
CAPNS1-206ENST00000588815 OR52M1Q8NGK5 317 aa25.64■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms